RNA–Protein interactions for RNA: ENST00000503934.5

CCHCR1-218, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-218ENST00000503934 GGT6Q6P531 493 aa28.73■■■□□ 2.19
CCHCR1-218ENST00000503934 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
CCHCR1-218ENST00000503934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.69■■■□□ 2.18
CCHCR1-218ENST00000503934 KANK1Q14678 1352 aa28.69■■■□□ 2.18
CCHCR1-218ENST00000503934 NUP155O75694 1391 aa28.67■■■□□ 2.18
CCHCR1-218ENST00000503934 RNF17Q9BXT8 1623 aaKnown RBP28.66■■■□□ 2.18
CCHCR1-218ENST00000503934 SIGLEC1Q9BZZ2 1709 aa28.66■■■□□ 2.18
CCHCR1-218ENST00000503934 MLECQ14165 292 aa28.65■■■□□ 2.18
CCHCR1-218ENST00000503934 UNC13BO14795 1591 aa28.64■■■□□ 2.18
CCHCR1-218ENST00000503934 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
CCHCR1-218ENST00000503934 WASHC2CQ9Y4E1 1318 aa28.62■■■□□ 2.17
CCHCR1-218ENST00000503934 PRDM15P57071 1507 aaPredicted RBP28.61■■■□□ 2.17
CCHCR1-218ENST00000503934 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
CCHCR1-218ENST00000503934 MROH1Q8NDA8 1641 aa28.59■■■□□ 2.17
CCHCR1-218ENST00000503934 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
CCHCR1-218ENST00000503934 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
CCHCR1-218ENST00000503934 VWDEQ8N2E2 1590 aa28.58■■■□□ 2.17
CCHCR1-218ENST00000503934 MPHOSPH9Q99550 1183 aa28.56■■■□□ 2.16
CCHCR1-218ENST00000503934 SLC4A1APQ9BWU0 796 aaKnown RBP28.56■■■□□ 2.16
CCHCR1-218ENST00000503934 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
CCHCR1-218ENST00000503934 LMTK2Q8IWU2 1503 aa28.53■■■□□ 2.16
CCHCR1-218ENST00000503934 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
CCHCR1-218ENST00000503934 PZPP20742 1482 aa28.52■■■□□ 2.16
CCHCR1-218ENST00000503934 ABCC3O15438 1527 aa28.5■■■□□ 2.15
CCHCR1-218ENST00000503934 ZC3H13Q5T200 1668 aaKnown RBP28.48■■■□□ 2.15
CCHCR1-218ENST00000503934 PKD2Q13563 968 aa28.47■■■□□ 2.15
CCHCR1-218ENST00000503934 ARHGAP31Q2M1Z3 1444 aa28.44■■■□□ 2.14
CCHCR1-218ENST00000503934 ADAMTSL3P82987 1691 aa28.44■■■□□ 2.14
CCHCR1-218ENST00000503934 ZMYM3Q14202 1370 aa28.43■■■□□ 2.14
CCHCR1-218ENST00000503934 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
CCHCR1-218ENST00000503934 TET3O43151 1660 aa28.42■■■□□ 2.14
CCHCR1-218ENST00000503934 CEP152O94986 1710 aa28.4■■■□□ 2.14
CCHCR1-218ENST00000503934 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
CCHCR1-218ENST00000503934 CLTCQ00610 1675 aaKnown RBP28.39■■■□□ 2.14
CCHCR1-218ENST00000503934 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
CCHCR1-218ENST00000503934 CAMSAP1Q5T5Y3 1602 aa28.37■■■□□ 2.13
CCHCR1-218ENST00000503934 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
CCHCR1-218ENST00000503934 NPATQ14207 1427 aa28.36■■■□□ 2.13
CCHCR1-218ENST00000503934 MROH2AA6NES4 1674 aa28.36■■■□□ 2.13
CCHCR1-218ENST00000503934 MADDQ8WXG6 1647 aa28.36■■■□□ 2.13
CCHCR1-218ENST00000503934 FOXD1Q16676 465 aa28.33■■■□□ 2.13
CCHCR1-218ENST00000503934 KDM4FA0A1W2PPD8 638 aa28.32■■■□□ 2.12
CCHCR1-218ENST00000503934 CCER1Q8TC90 406 aaPredicted RBP28.31■■■□□ 2.12
CCHCR1-218ENST00000503934 E9PCH4 1651 aa28.31■■■□□ 2.12
CCHCR1-218ENST00000503934 PTPRTO14522 1441 aa28.29■■■□□ 2.12
CCHCR1-218ENST00000503934 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
CCHCR1-218ENST00000503934 FBXO31Q5XUX0 539 aaPredicted RBP28.29■■■□□ 2.12
CCHCR1-218ENST00000503934 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
CCHCR1-218ENST00000503934 CEBPAP49715 358 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-218ENST00000503934 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
CCHCR1-218ENST00000503934 NOS1P29475 1434 aa28.26■■■□□ 2.12
CCHCR1-218ENST00000503934 PTPRMP28827 1452 aa28.26■■■□□ 2.11
CCHCR1-218ENST00000503934 ERVK-7P63135 1459 aa28.24■■■□□ 2.11
CCHCR1-218ENST00000503934 PLA2R1Q13018 1463 aa28.22■■■□□ 2.11
CCHCR1-218ENST00000503934 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
CCHCR1-218ENST00000503934 C3P01024 1663 aa28.22■■■□□ 2.11
CCHCR1-218ENST00000503934 SPATA31D1Q6ZQQ2 1576 aa28.21■■■□□ 2.11
CCHCR1-218ENST00000503934 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
CCHCR1-218ENST00000503934 TNRQ92752 1358 aa28.19■■■□□ 2.1
CCHCR1-218ENST00000503934 PREX1Q8TCU6 1659 aa28.19■■■□□ 2.1
CCHCR1-218ENST00000503934 TRPM2O94759 1503 aa28.18■■■□□ 2.1
CCHCR1-218ENST00000503934 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
CCHCR1-218ENST00000503934 SPHKAPQ2M3C7 1700 aa28.16■■■□□ 2.1
CCHCR1-218ENST00000503934 CFAP65Q6ZU64 1925 aaKnown RBP28.14■■■□□ 2.1
CCHCR1-218ENST00000503934 IDI1Q13907 227 aa28.13■■■□□ 2.09
CCHCR1-218ENST00000503934 SYNMO15061 1565 aa28.11■■■□□ 2.09
CCHCR1-218ENST00000503934 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
CCHCR1-218ENST00000503934 NLRP1Q9C000 1473 aa28.09■■■□□ 2.09
CCHCR1-218ENST00000503934 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
CCHCR1-218ENST00000503934 SETD1BQ9UPS6 1966 aaKnown RBP28.07■■■□□ 2.08
CCHCR1-218ENST00000503934 NEUROD1Q13562 356 aa28.06■■■□□ 2.08
CCHCR1-218ENST00000503934 PIK3C2BO00750 1634 aa28.05■■■□□ 2.08
CCHCR1-218ENST00000503934 CLTCL1P53675 1640 aa28.04■■■□□ 2.08
CCHCR1-218ENST00000503934 STAG3Q9UJ98 1225 aa28.04■■■□□ 2.08
CCHCR1-218ENST00000503934 UGGT1Q9NYU2 1555 aa28.03■■■□□ 2.08
CCHCR1-218ENST00000503934 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
CCHCR1-218ENST00000503934 TIMELESSQ9UNS1 1208 aa28■■■□□ 2.07
CCHCR1-218ENST00000503934 A2ML1A8K2U0 1454 aa27.99■■■□□ 2.07
CCHCR1-218ENST00000503934 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
CCHCR1-218ENST00000503934 THEMISQ8N1K5 641 aaPredicted RBP27.97■■■□□ 2.07
CCHCR1-218ENST00000503934 SPATA31E1Q6ZUB1 1445 aa27.97■■■□□ 2.07
CCHCR1-218ENST00000503934 NEURL4Q96JN8 1562 aa27.97■■■□□ 2.07
CCHCR1-218ENST00000503934 RGL3Q3MIN7 710 aa27.95■■■□□ 2.06
CCHCR1-218ENST00000503934 RPGRIP1LQ68CZ1 1315 aa27.94■■■□□ 2.06
CCHCR1-218ENST00000503934 MYO3AQ8NEV4 1616 aa27.94■■■□□ 2.06
CCHCR1-218ENST00000503934 KIF1BO60333 1816 aa27.94■■■□□ 2.06
CCHCR1-218ENST00000503934 ZNF326Q5BKZ1 582 aaKnown RBP27.93■■■□□ 2.06
CCHCR1-218ENST00000503934 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
CCHCR1-218ENST00000503934 ADGRB3O60242 1522 aa27.92■■■□□ 2.06
CCHCR1-218ENST00000503934 KDM5AP29375 1690 aaKnown RBP27.92■■■□□ 2.06
CCHCR1-218ENST00000503934 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
CCHCR1-218ENST00000503934 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
CCHCR1-218ENST00000503934 CEP170BQ9Y4F5 1589 aaPredicted RBP27.91■■■□□ 2.06
CCHCR1-218ENST00000503934 HDGFP51858 240 aaKnown RBP27.91■■■□□ 2.06
CCHCR1-218ENST00000503934 L3MBTL2Q969R5 705 aa27.88■■■□□ 2.05
CCHCR1-218ENST00000503934 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
CCHCR1-218ENST00000503934 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.86■■■□□ 2.05
CCHCR1-218ENST00000503934 UBR1Q8IWV7 1749 aa27.86■■■□□ 2.05
CCHCR1-218ENST00000503934 DCAF11Q8TEB1 546 aa27.85■■■□□ 2.05
CCHCR1-218ENST00000503934 TMEM2Q9UHN6 1383 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms