RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 RNF17Q9BXT8 1623 aaKnown RBP28.56■■■□□ 2.16
RNF4-204ENST00000503659 EIF2AK4Q9P2K8 1649 aaKnown RBP28.55■■■□□ 2.16
RNF4-204ENST00000503659 FAM135AQ9P2D6 1515 aa28.55■■■□□ 2.16
RNF4-204ENST00000503659 ABCC5O15440 1437 aa28.55■■■□□ 2.16
RNF4-204ENST00000503659 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
RNF4-204ENST00000503659 PTPRKQ15262 1439 aa28.54■■■□□ 2.16
RNF4-204ENST00000503659 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
RNF4-204ENST00000503659 DAPK1P53355 1430 aa28.52■■■□□ 2.16
RNF4-204ENST00000503659 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
RNF4-204ENST00000503659 PTPRTO14522 1441 aa28.51■■■□□ 2.15
RNF4-204ENST00000503659 DUOX2Q9NRD8 1548 aa28.49■■■□□ 2.15
RNF4-204ENST00000503659 CERKQ8TCT0 537 aa28.49■■■□□ 2.15
RNF4-204ENST00000503659 MROH1Q8NDA8 1641 aa28.49■■■□□ 2.15
RNF4-204ENST00000503659 NCOA1Q15788 1441 aa28.46■■■□□ 2.15
RNF4-204ENST00000503659 ZC3H13Q5T200 1668 aaKnown RBP28.45■■■□□ 2.15
RNF4-204ENST00000503659 CEP170BQ9Y4F5 1589 aaPredicted RBP28.43■■■□□ 2.14
RNF4-204ENST00000503659 PZPP20742 1482 aa28.43■■■□□ 2.14
RNF4-204ENST00000503659 KIF15Q9NS87 1388 aa28.43■■■□□ 2.14
RNF4-204ENST00000503659 ABCC3O15438 1527 aa28.42■■■□□ 2.14
RNF4-204ENST00000503659 CAMSAP1Q5T5Y3 1602 aa28.4■■■□□ 2.14
RNF4-204ENST00000503659 CEP152O94986 1710 aa28.4■■■□□ 2.14
RNF4-204ENST00000503659 WASHC2CQ9Y4E1 1318 aa28.4■■■□□ 2.14
RNF4-204ENST00000503659 ERBINQ96RT1 1412 aa28.39■■■□□ 2.14
RNF4-204ENST00000503659 PLA2R1Q13018 1463 aa28.37■■■□□ 2.13
RNF4-204ENST00000503659 PRDM15P57071 1507 aaPredicted RBP28.37■■■□□ 2.13
RNF4-204ENST00000503659 DEPDC5O75140 1603 aa28.36■■■□□ 2.13
RNF4-204ENST00000503659 RRP7BPQ9NSQ0 103 aa28.36■■■□□ 2.13
RNF4-204ENST00000503659 ADGRL2O95490 1459 aa28.34■■■□□ 2.13
RNF4-204ENST00000503659 FBXO31Q5XUX0 539 aaPredicted RBP28.34■■■□□ 2.13
RNF4-204ENST00000503659 PKD2Q13563 968 aa28.33■■■□□ 2.13
RNF4-204ENST00000503659 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
RNF4-204ENST00000503659 TNRQ92752 1358 aa28.32■■■□□ 2.12
RNF4-204ENST00000503659 ANKRD30AQ9BXX3 1397 aa28.32■■■□□ 2.12
RNF4-204ENST00000503659 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
RNF4-204ENST00000503659 CHIC2Q9UKJ5 165 aa28.31■■■□□ 2.12
RNF4-204ENST00000503659 SPATA31D1Q6ZQQ2 1576 aa28.28■■■□□ 2.12
RNF4-204ENST00000503659 NCKAP5LQ9HCH0 1330 aa28.26■■■□□ 2.11
RNF4-204ENST00000503659 LTBP4Q8N2S1 1624 aa28.25■■■□□ 2.11
RNF4-204ENST00000503659 ERVK-7P63135 1459 aa28.24■■■□□ 2.11
RNF4-204ENST00000503659 CFAP65Q6ZU64 1925 aaKnown RBP28.24■■■□□ 2.11
RNF4-204ENST00000503659 NLRP1Q9C000 1473 aa28.23■■■□□ 2.11
RNF4-204ENST00000503659 VWDEQ8N2E2 1590 aa28.23■■■□□ 2.11
RNF4-204ENST00000503659 IQSEC2Q5JU85 1478 aa28.22■■■□□ 2.11
RNF4-204ENST00000503659 PPARGC1BQ86YN6 1023 aaKnown RBP28.22■■■□□ 2.11
RNF4-204ENST00000503659 POLR1AO95602 1720 aaPredicted RBP28.21■■■□□ 2.11
RNF4-204ENST00000503659 ARHGAP31Q2M1Z3 1444 aa28.18■■■□□ 2.1
RNF4-204ENST00000503659 LMTK2Q8IWU2 1503 aa28.18■■■□□ 2.1
RNF4-204ENST00000503659 UGGT1Q9NYU2 1555 aa28.16■■■□□ 2.1
RNF4-204ENST00000503659 NEURL4Q96JN8 1562 aa28.16■■■□□ 2.1
RNF4-204ENST00000503659 THEMISQ8N1K5 641 aaPredicted RBP28.15■■■□□ 2.1
RNF4-204ENST00000503659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.15■■■□□ 2.1
RNF4-204ENST00000503659 ANKRD50Q9ULJ7 1429 aa28.15■■■□□ 2.1
RNF4-204ENST00000503659 KANK1Q14678 1352 aa28.13■■■□□ 2.09
RNF4-204ENST00000503659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.13■■■□□ 2.09
RNF4-204ENST00000503659 UBR1Q8IWV7 1749 aa28.12■■■□□ 2.09
RNF4-204ENST00000503659 EFCAB6Q5THR3 1501 aa28.11■■■□□ 2.09
RNF4-204ENST00000503659 ZNF335Q9H4Z2 1342 aaPredicted RBP28.11■■■□□ 2.09
RNF4-204ENST00000503659 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
RNF4-204ENST00000503659 UNC13BO14795 1591 aa28.09■■■□□ 2.09
RNF4-204ENST00000503659 ANKLE2Q86XL3 938 aa28.09■■■□□ 2.09
RNF4-204ENST00000503659 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
RNF4-204ENST00000503659 TET3O43151 1660 aa28.03■■■□□ 2.08
RNF4-204ENST00000503659 PIK3C2BO00750 1634 aa28.03■■■□□ 2.08
RNF4-204ENST00000503659 SYNMO15061 1565 aa28.03■■■□□ 2.08
RNF4-204ENST00000503659 MED14O60244 1454 aa28.02■■■□□ 2.08
RNF4-204ENST00000503659 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.07
RNF4-204ENST00000503659 ITGAEP38570 1179 aa27.99■■■□□ 2.07
RNF4-204ENST00000503659 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
RNF4-204ENST00000503659 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
RNF4-204ENST00000503659 NOS1P29475 1434 aa27.98■■■□□ 2.07
RNF4-204ENST00000503659 IQGAP3Q86VI3 1631 aa27.97■■■□□ 2.07
RNF4-204ENST00000503659 NPHP4O75161 1426 aaPredicted RBP27.97■■■□□ 2.07
RNF4-204ENST00000503659 RPRD2Q5VT52 1461 aaKnown RBP27.96■■■□□ 2.07
RNF4-204ENST00000503659 CPS1P31327 1500 aa27.96■■■□□ 2.07
RNF4-204ENST00000503659 ARHGAP23Q9P227 1491 aa27.95■■■□□ 2.07
RNF4-204ENST00000503659 SLIT1O75093 1534 aa27.95■■■□□ 2.06
RNF4-204ENST00000503659 E9PCH4 1651 aa27.93■■■□□ 2.06
RNF4-204ENST00000503659 UBAP1LF5GYI3 381 aa27.91■■■□□ 2.06
RNF4-204ENST00000503659 SCAF11Q99590 1463 aaKnown RBP27.89■■■□□ 2.06
RNF4-204ENST00000503659 ADGRB3O60242 1522 aa27.89■■■□□ 2.06
RNF4-204ENST00000503659 IDI1Q13907 227 aa27.88■■■□□ 2.05
RNF4-204ENST00000503659 MYO5BQ9ULV0 1848 aa27.85■■■□□ 2.05
RNF4-204ENST00000503659 TMEM2Q9UHN6 1383 aa27.84■■■□□ 2.05
RNF4-204ENST00000503659 STRCP1A6NGW2 1772 aa27.83■■■□□ 2.05
RNF4-204ENST00000503659 LTKP29376 864 aa27.83■■■□□ 2.05
RNF4-204ENST00000503659 NUP155O75694 1391 aa27.82■■■□□ 2.04
RNF4-204ENST00000503659 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
RNF4-204ENST00000503659 NAIPQ13075 1403 aa27.81■■■□□ 2.04
RNF4-204ENST00000503659 TXNDC2Q86VQ3 553 aa27.8■■■□□ 2.04
RNF4-204ENST00000503659 SLC52A1Q9NWF4 448 aa27.8■■■□□ 2.04
RNF4-204ENST00000503659 TMEM131LA2VDJ0 1609 aa27.79■■■□□ 2.04
RNF4-204ENST00000503659 TOM1O60784 492 aa27.79■■■□□ 2.04
RNF4-204ENST00000503659 STAG3Q9UJ98 1225 aa27.79■■■□□ 2.04
RNF4-204ENST00000503659 HFM1A2PYH4 1435 aa27.74■■■□□ 2.03
RNF4-204ENST00000503659 SPHKAPQ2M3C7 1700 aa27.73■■■□□ 2.03
RNF4-204ENST00000503659 DISP3Q9P2K9 1392 aa27.72■■■□□ 2.03
RNF4-204ENST00000503659 ZFYVE9O95405 1425 aa27.7■■■□□ 2.03
RNF4-204ENST00000503659 LRRC7Q96NW7 1537 aa27.7■■■□□ 2.02
RNF4-204ENST00000503659 PIP4K2BP78356 416 aa27.64■■■□□ 2.02
RNF4-204ENST00000503659 RIMS2Q9UQ26 1411 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms