RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
GYPA-203ENST00000503627 POM121Q96HA1 1249 aa9.03□□□□□ -0.96
GYPA-203ENST00000503627 DSG2Q14126 1118 aa9.02□□□□□ -0.97
GYPA-203ENST00000503627 HIC1Q14526 733 aa9.02□□□□□ -0.97
GYPA-203ENST00000503627 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
GYPA-203ENST00000503627 OXER1Q8TDS5 423 aa9.01□□□□□ -0.97
GYPA-203ENST00000503627 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
GYPA-203ENST00000503627 RETREG2Q8NC44 543 aa9□□□□□ -0.97
GYPA-203ENST00000503627 SLAIN1Q8ND83 568 aa9□□□□□ -0.97
GYPA-203ENST00000503627 REPIN1Q9BWE0 567 aaKnown RBP8.99□□□□□ -0.97
GYPA-203ENST00000503627 FCHSD2O94868 740 aa8.98□□□□□ -0.97
GYPA-203ENST00000503627 OSBPP22059 807 aa8.98□□□□□ -0.97
GYPA-203ENST00000503627 TMCO4Q5TGY1 634 aa8.98□□□□□ -0.97
GYPA-203ENST00000503627 TMEM106CQ9BVX2 250 aa8.98□□□□□ -0.97
GYPA-203ENST00000503627 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
GYPA-203ENST00000503627 PLCG2P16885 1265 aa8.97□□□□□ -0.97
GYPA-203ENST00000503627 ST18O60284 1047 aa8.96□□□□□ -0.98
GYPA-203ENST00000503627 GOLGA2Q08379 1002 aa8.96□□□□□ -0.98
GYPA-203ENST00000503627 IRF5Q13568 498 aa8.96□□□□□ -0.98
GYPA-203ENST00000503627 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
GYPA-203ENST00000503627 MFAP1P55081 439 aaKnown RBP8.95□□□□□ -0.98
GYPA-203ENST00000503627 FOXK1P85037 733 aa8.94□□□□□ -0.98
GYPA-203ENST00000503627 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
GYPA-203ENST00000503627 TMUB1Q9BVT8 246 aa8.94□□□□□ -0.98
GYPA-203ENST00000503627 GZF1Q9H116 711 aaPredicted RBP8.94□□□□□ -0.98
GYPA-203ENST00000503627 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
GYPA-203ENST00000503627 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
GYPA-203ENST00000503627 COG6Q9Y2V7 657 aa8.93□□□□□ -0.98
GYPA-203ENST00000503627 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
GYPA-203ENST00000503627 FOXD4L4Q8WXT5 416 aaPredicted RBP8.91□□□□□ -0.98
GYPA-203ENST00000503627 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.98
GYPA-203ENST00000503627 IGSF3O75054 1194 aa8.9□□□□□ -0.98
GYPA-203ENST00000503627 PRIM1P49642 420 aaKnown RBP8.9□□□□□ -0.98
GYPA-203ENST00000503627 PTGDRQ13258 359 aa8.9□□□□□ -0.98
GYPA-203ENST00000503627 PROCA1Q8NCQ7 364 aaPredicted RBP8.9□□□□□ -0.98
GYPA-203ENST00000503627 PLPP6Q8IY26 295 aa8.89□□□□□ -0.99
GYPA-203ENST00000503627 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
GYPA-203ENST00000503627 PTGER2P43116 358 aa8.88□□□□□ -0.99
GYPA-203ENST00000503627 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
GYPA-203ENST00000503627 CLCN1P35523 988 aa8.87□□□□□ -0.99
GYPA-203ENST00000503627 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
GYPA-203ENST00000503627 TMEM121BQ9BXQ6 578 aaPredicted RBP8.87□□□□□ -0.99
GYPA-203ENST00000503627 OCEL1Q9H607 264 aa8.87□□□□□ -0.99
GYPA-203ENST00000503627 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
GYPA-203ENST00000503627 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.86□□□□□ -0.99
GYPA-203ENST00000503627 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
GYPA-203ENST00000503627 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
GYPA-203ENST00000503627 PPP1R15AO75807 674 aaPredicted RBP8.85□□□□□ -0.99
GYPA-203ENST00000503627 DDX12PQ92771 950 aa8.85□□□□□ -0.99
GYPA-203ENST00000503627 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
GYPA-203ENST00000503627 SNPHO15079 494 aa8.84□□□□□ -0.99
GYPA-203ENST00000503627 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
GYPA-203ENST00000503627 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
GYPA-203ENST00000503627 MICALL2Q8IY33 904 aa8.84□□□□□ -0.99
GYPA-203ENST00000503627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
GYPA-203ENST00000503627 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.84□□□□□ -0.99
GYPA-203ENST00000503627 BANK1Q8NDB2 785 aa8.83□□□□□ -1
GYPA-203ENST00000503627 PHOX2BQ99453 314 aa8.83□□□□□ -1
GYPA-203ENST00000503627 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
GYPA-203ENST00000503627 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
GYPA-203ENST00000503627 FBXW7Q969H0 707 aa8.82□□□□□ -1
GYPA-203ENST00000503627 KIF3CO14782 793 aa8.81□□□□□ -1
GYPA-203ENST00000503627 MMRN1Q13201 1228 aa8.81□□□□□ -1
GYPA-203ENST00000503627 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
GYPA-203ENST00000503627 SPNS2Q8IVW8 549 aa8.81□□□□□ -1
GYPA-203ENST00000503627 C2orf72A6NCS6 295 aa8.8□□□□□ -1
GYPA-203ENST00000503627 TBC1D12O60347 775 aa8.8□□□□□ -1
GYPA-203ENST00000503627 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
GYPA-203ENST00000503627 UPF1Q92900 1129 aaKnown RBP eCLIP8.8□□□□□ -1
GYPA-203ENST00000503627 RFC5P40937 340 aa8.79□□□□□ -1
GYPA-203ENST00000503627 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
GYPA-203ENST00000503627 PDE4CQ08493 712 aa8.78□□□□□ -1
GYPA-203ENST00000503627 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
GYPA-203ENST00000503627 MARVELD3Q96A59 401 aa8.78□□□□□ -1
GYPA-203ENST00000503627 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
GYPA-203ENST00000503627 PATL2C9JE40 543 aaKnown RBP8.77□□□□□ -1.01
GYPA-203ENST00000503627 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
GYPA-203ENST00000503627 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
GYPA-203ENST00000503627 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
GYPA-203ENST00000503627 KCNA1Q09470 495 aa8.76□□□□□ -1.01
GYPA-203ENST00000503627 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
GYPA-203ENST00000503627 MTMR14Q8NCE2 650 aa8.76□□□□□ -1.01
GYPA-203ENST00000503627 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
GYPA-203ENST00000503627 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
GYPA-203ENST00000503627 ACIN1Q9UKV3 1341 aaKnown RBP8.76□□□□□ -1.01
GYPA-203ENST00000503627 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
GYPA-203ENST00000503627 E9PSI1 815 aa8.75□□□□□ -1.01
GYPA-203ENST00000503627 POM121CA8CG34 1229 aa8.74□□□□□ -1.01
GYPA-203ENST00000503627 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
GYPA-203ENST00000503627 GLMNQ92990 594 aa8.74□□□□□ -1.01
GYPA-203ENST00000503627 BRD1O95696 1058 aa8.73□□□□□ -1.01
GYPA-203ENST00000503627 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
GYPA-203ENST00000503627 EVI5O60447 810 aa8.72□□□□□ -1.01
GYPA-203ENST00000503627 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
GYPA-203ENST00000503627 L3MBTL3Q96JM7 780 aaPredicted RBP8.72□□□□□ -1.01
GYPA-203ENST00000503627 EMP3P54852 163 aa8.71□□□□□ -1.02
GYPA-203ENST00000503627 WWC1Q8IX03 1113 aa8.71□□□□□ -1.02
GYPA-203ENST00000503627 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
GYPA-203ENST00000503627 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
GYPA-203ENST00000503627 USTQ9Y2C2 406 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms