RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
SCLT1-206ENST00000503565 GRXCR2A6NFK2 248 aa9.75□□□□□ -0.85
SCLT1-206ENST00000503565 OSBPP22059 807 aa9.75□□□□□ -0.85
SCLT1-206ENST00000503565 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
SCLT1-206ENST00000503565 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
SCLT1-206ENST00000503565 PBX2P40425 430 aa9.73□□□□□ -0.85
SCLT1-206ENST00000503565 EPAS1Q99814 870 aa9.73□□□□□ -0.85
SCLT1-206ENST00000503565 COL9A1P20849 921 aa9.72□□□□□ -0.85
SCLT1-206ENST00000503565 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCLT1-206ENST00000503565 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
SCLT1-206ENST00000503565 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
SCLT1-206ENST00000503565 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
SCLT1-206ENST00000503565 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
SCLT1-206ENST00000503565 FBXW7Q969H0 707 aa9.71□□□□□ -0.86
SCLT1-206ENST00000503565 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
SCLT1-206ENST00000503565 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
SCLT1-206ENST00000503565 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
SCLT1-206ENST00000503565 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
SCLT1-206ENST00000503565 PTPREP23469 700 aa9.68□□□□□ -0.86
SCLT1-206ENST00000503565 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
SCLT1-206ENST00000503565 ZC3H15Q8WU90 426 aaKnown RBP9.68□□□□□ -0.86
SCLT1-206ENST00000503565 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
SCLT1-206ENST00000503565 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
SCLT1-206ENST00000503565 ZBED2Q9BTP6 218 aa9.66□□□□□ -0.86
SCLT1-206ENST00000503565 MAP3K7O43318 606 aa9.64□□□□□ -0.87
SCLT1-206ENST00000503565 HRO43593 1189 aa9.64□□□□□ -0.87
SCLT1-206ENST00000503565 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
SCLT1-206ENST00000503565 NPDC1Q9NQX5 325 aaPredicted RBP9.64□□□□□ -0.87
SCLT1-206ENST00000503565 VPS9D1Q9Y2B5 631 aa9.64□□□□□ -0.87
SCLT1-206ENST00000503565 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
SCLT1-206ENST00000503565 TK2O00142 265 aa9.63□□□□□ -0.87
SCLT1-206ENST00000503565 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
SCLT1-206ENST00000503565 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
SCLT1-206ENST00000503565 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
SCLT1-206ENST00000503565 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
SCLT1-206ENST00000503565 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
SCLT1-206ENST00000503565 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
SCLT1-206ENST00000503565 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
SCLT1-206ENST00000503565 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
SCLT1-206ENST00000503565 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
SCLT1-206ENST00000503565 NEUROD2Q15784 382 aa9.57□□□□□ -0.88
SCLT1-206ENST00000503565 ARXQ96QS3 562 aa9.57□□□□□ -0.88
SCLT1-206ENST00000503565 TSKSQ9UJT2 592 aa9.57□□□□□ -0.88
SCLT1-206ENST00000503565 GPR37O15354 613 aa9.56□□□□□ -0.88
SCLT1-206ENST00000503565 PTGDRQ13258 359 aa9.56□□□□□ -0.88
SCLT1-206ENST00000503565 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
SCLT1-206ENST00000503565 ZMYND10O75800 440 aa9.55□□□□□ -0.88
SCLT1-206ENST00000503565 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
SCLT1-206ENST00000503565 TRIM6-TRIM34B2RNG4 842 aa9.54□□□□□ -0.88
SCLT1-206ENST00000503565 PRSS12P56730 875 aa9.54□□□□□ -0.88
SCLT1-206ENST00000503565 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
SCLT1-206ENST00000503565 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
SCLT1-206ENST00000503565 KIAA1468Q9P260 1216 aa9.54□□□□□ -0.88
SCLT1-206ENST00000503565 NUTM2FA1L443 756 aa9.53□□□□□ -0.88
SCLT1-206ENST00000503565 RABGEF1Q9UJ41 708 aa9.53□□□□□ -0.88
SCLT1-206ENST00000503565 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
SCLT1-206ENST00000503565 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
SCLT1-206ENST00000503565 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
SCLT1-206ENST00000503565 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
SCLT1-206ENST00000503565 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
SCLT1-206ENST00000503565 FECHP22830 423 aa9.49□□□□□ -0.89
SCLT1-206ENST00000503565 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
SCLT1-206ENST00000503565 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
SCLT1-206ENST00000503565 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
SCLT1-206ENST00000503565 SMAPO00193 183 aa9.46□□□□□ -0.9
SCLT1-206ENST00000503565 FCHSD2O94868 740 aa9.46□□□□□ -0.9
SCLT1-206ENST00000503565 RNF166Q96A37 237 aaPredicted RBP9.46□□□□□ -0.9
SCLT1-206ENST00000503565 TATDN2Q93075 761 aa9.45□□□□□ -0.9
SCLT1-206ENST00000503565 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
SCLT1-206ENST00000503565 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
SCLT1-206ENST00000503565 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
SCLT1-206ENST00000503565 HIC1Q14526 733 aa9.43□□□□□ -0.9
SCLT1-206ENST00000503565 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
SCLT1-206ENST00000503565 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
SCLT1-206ENST00000503565 EYA1Q99502 592 aa9.43□□□□□ -0.9
SCLT1-206ENST00000503565 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
SCLT1-206ENST00000503565 PNMA3Q9UL41 463 aa9.42□□□□□ -0.9
SCLT1-206ENST00000503565 GNPATO15228 680 aa9.41□□□□□ -0.9
SCLT1-206ENST00000503565 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
SCLT1-206ENST00000503565 KCTD12Q96CX2 325 aaKnown RBP9.41□□□□□ -0.9
SCLT1-206ENST00000503565 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
SCLT1-206ENST00000503565 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
SCLT1-206ENST00000503565 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
SCLT1-206ENST00000503565 HOMEZQ8IX15 550 aa9.4□□□□□ -0.9
SCLT1-206ENST00000503565 AK7Q96M32 723 aa9.39□□□□□ -0.91
SCLT1-206ENST00000503565 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
SCLT1-206ENST00000503565 GPBP1L1Q9HC44 474 aaPredicted RBP9.39□□□□□ -0.91
SCLT1-206ENST00000503565 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
SCLT1-206ENST00000503565 WNT2BQ93097 391 aa9.38□□□□□ -0.91
SCLT1-206ENST00000503565 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
SCLT1-206ENST00000503565 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
SCLT1-206ENST00000503565 BCAMP50895 628 aa9.36□□□□□ -0.91
SCLT1-206ENST00000503565 PHOX2BQ99453 314 aa9.35□□□□□ -0.91
SCLT1-206ENST00000503565 SOWAHBA6NEL2 793 aa9.34□□□□□ -0.91
SCLT1-206ENST00000503565 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
SCLT1-206ENST00000503565 SAMD7Q7Z3H4 446 aa9.34□□□□□ -0.91
SCLT1-206ENST00000503565 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
SCLT1-206ENST00000503565 DAXXQ9UER7 740 aaPredicted RBP9.33□□□□□ -0.92
SCLT1-206ENST00000503565 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
SCLT1-206ENST00000503565 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms