RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 ZNF335Q9H4Z2 1342 aaPredicted RBP22.64■■□□□ 1.22
POLR2J3-207ENST00000503564 POLR1AO95602 1720 aaPredicted RBP22.64■■□□□ 1.21
POLR2J3-207ENST00000503564 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
POLR2J3-207ENST00000503564 LRRC9Q6ZRR7 1453 aa22.63■■□□□ 1.21
POLR2J3-207ENST00000503564 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
POLR2J3-207ENST00000503564 KIF3BO15066 747 aa22.61■■□□□ 1.21
POLR2J3-207ENST00000503564 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
POLR2J3-207ENST00000503564 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
POLR2J3-207ENST00000503564 TNRQ92752 1358 aa22.6■■□□□ 1.21
POLR2J3-207ENST00000503564 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
POLR2J3-207ENST00000503564 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
POLR2J3-207ENST00000503564 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.21
POLR2J3-207ENST00000503564 FBXO31Q5XUX0 539 aaPredicted RBP22.57■■□□□ 1.2
POLR2J3-207ENST00000503564 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
POLR2J3-207ENST00000503564 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
POLR2J3-207ENST00000503564 EIF2AK4Q9P2K8 1649 aaKnown RBP22.55■■□□□ 1.2
POLR2J3-207ENST00000503564 WASHC2CQ9Y4E1 1318 aa22.53■■□□□ 1.2
POLR2J3-207ENST00000503564 NLRP1Q9C000 1473 aa22.53■■□□□ 1.2
POLR2J3-207ENST00000503564 MROH1Q8NDA8 1641 aa22.53■■□□□ 1.2
POLR2J3-207ENST00000503564 ABCC3O15438 1527 aa22.52■■□□□ 1.2
POLR2J3-207ENST00000503564 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
POLR2J3-207ENST00000503564 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
POLR2J3-207ENST00000503564 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
POLR2J3-207ENST00000503564 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
POLR2J3-207ENST00000503564 MYOM3Q5VTT5 1437 aa22.5■■□□□ 1.19
POLR2J3-207ENST00000503564 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
POLR2J3-207ENST00000503564 KANK4Q5T7N3 995 aaPredicted RBP22.49■■□□□ 1.19
POLR2J3-207ENST00000503564 UGGT1Q9NYU2 1555 aa22.49■■□□□ 1.19
POLR2J3-207ENST00000503564 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
POLR2J3-207ENST00000503564 CPS1P31327 1500 aa22.47■■□□□ 1.19
POLR2J3-207ENST00000503564 UBAP1LF5GYI3 381 aa22.47■■□□□ 1.19
POLR2J3-207ENST00000503564 CEP152O94986 1710 aa22.47■■□□□ 1.19
POLR2J3-207ENST00000503564 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
POLR2J3-207ENST00000503564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.46■■□□□ 1.19
POLR2J3-207ENST00000503564 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
POLR2J3-207ENST00000503564 MED14O60244 1454 aa22.45■■□□□ 1.18
POLR2J3-207ENST00000503564 SHANK2Q9UPX8 1470 aa22.45■■□□□ 1.18
POLR2J3-207ENST00000503564 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
POLR2J3-207ENST00000503564 DUOX2Q9NRD8 1548 aa22.43■■□□□ 1.18
POLR2J3-207ENST00000503564 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
POLR2J3-207ENST00000503564 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
POLR2J3-207ENST00000503564 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
POLR2J3-207ENST00000503564 ANKLE2Q86XL3 938 aa22.4■■□□□ 1.18
POLR2J3-207ENST00000503564 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
POLR2J3-207ENST00000503564 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
POLR2J3-207ENST00000503564 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.17
POLR2J3-207ENST00000503564 CFAP65Q6ZU64 1925 aaKnown RBP22.38■■□□□ 1.17
POLR2J3-207ENST00000503564 SOCS7O14512 581 aa22.37■■□□□ 1.17
POLR2J3-207ENST00000503564 STRCP1A6NGW2 1772 aa22.37■■□□□ 1.17
POLR2J3-207ENST00000503564 ALKQ9UM73 1620 aa22.36■■□□□ 1.17
POLR2J3-207ENST00000503564 ABCC5O15440 1437 aa22.36■■□□□ 1.17
POLR2J3-207ENST00000503564 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
POLR2J3-207ENST00000503564 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
POLR2J3-207ENST00000503564 ARHGAP31Q2M1Z3 1444 aa22.32■■□□□ 1.16
POLR2J3-207ENST00000503564 SYNMO15061 1565 aa22.32■■□□□ 1.16
POLR2J3-207ENST00000503564 DAPK1P53355 1430 aa22.31■■□□□ 1.16
POLR2J3-207ENST00000503564 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
POLR2J3-207ENST00000503564 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
POLR2J3-207ENST00000503564 SLIT1O75093 1534 aa22.28■■□□□ 1.16
POLR2J3-207ENST00000503564 TOM1O60784 492 aa22.28■■□□□ 1.16
POLR2J3-207ENST00000503564 SCAF11Q99590 1463 aaKnown RBP22.28■■□□□ 1.16
POLR2J3-207ENST00000503564 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
POLR2J3-207ENST00000503564 HSPA1LP34931 641 aa22.27■■□□□ 1.16
POLR2J3-207ENST00000503564 MED1Q15648 1581 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-207ENST00000503564 PIP4K2BP78356 416 aa22.26■■□□□ 1.15
POLR2J3-207ENST00000503564 PIK3C2BO00750 1634 aa22.26■■□□□ 1.15
POLR2J3-207ENST00000503564 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
POLR2J3-207ENST00000503564 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
POLR2J3-207ENST00000503564 LMTK2Q8IWU2 1503 aa22.23■■□□□ 1.15
POLR2J3-207ENST00000503564 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
POLR2J3-207ENST00000503564 XIRP1Q702N8 1843 aaKnown RBP22.2■■□□□ 1.14
POLR2J3-207ENST00000503564 LTKP29376 864 aa22.2■■□□□ 1.14
POLR2J3-207ENST00000503564 APLP2Q06481 763 aa22.19■■□□□ 1.14
POLR2J3-207ENST00000503564 EFCAB6Q5THR3 1501 aa22.17■■□□□ 1.14
POLR2J3-207ENST00000503564 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
POLR2J3-207ENST00000503564 KANK1Q14678 1352 aa22.17■■□□□ 1.14
POLR2J3-207ENST00000503564 ANKRD30AQ9BXX3 1397 aa22.17■■□□□ 1.14
POLR2J3-207ENST00000503564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.16■■□□□ 1.14
POLR2J3-207ENST00000503564 TMEM2Q9UHN6 1383 aa22.15■■□□□ 1.14
POLR2J3-207ENST00000503564 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
POLR2J3-207ENST00000503564 NOS1P29475 1434 aa22.13■■□□□ 1.13
POLR2J3-207ENST00000503564 CHIC2Q9UKJ5 165 aa22.12■■□□□ 1.13
POLR2J3-207ENST00000503564 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
POLR2J3-207ENST00000503564 EID1Q9Y6B2 187 aa22.09■■□□□ 1.13
POLR2J3-207ENST00000503564 TET3O43151 1660 aa22.09■■□□□ 1.13
POLR2J3-207ENST00000503564 IDI1Q13907 227 aa22.08■■□□□ 1.13
POLR2J3-207ENST00000503564 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
POLR2J3-207ENST00000503564 RPRD2Q5VT52 1461 aaKnown RBP22.05■■□□□ 1.12
POLR2J3-207ENST00000503564 ANKRD50Q9ULJ7 1429 aa22.05■■□□□ 1.12
POLR2J3-207ENST00000503564 MYO5BQ9ULV0 1848 aa22.04■■□□□ 1.12
POLR2J3-207ENST00000503564 STAG3Q9UJ98 1225 aa22.04■■□□□ 1.12
POLR2J3-207ENST00000503564 GCC2Q8IWJ2 1684 aa22.02■■□□□ 1.12
POLR2J3-207ENST00000503564 UNC13BO14795 1591 aa22.02■■□□□ 1.12
POLR2J3-207ENST00000503564 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
POLR2J3-207ENST00000503564 TMEM94Q12767 1356 aa21.99■■□□□ 1.11
POLR2J3-207ENST00000503564 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
POLR2J3-207ENST00000503564 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
POLR2J3-207ENST00000503564 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
POLR2J3-207ENST00000503564 ZFYVE9O95405 1425 aa21.98■■□□□ 1.11
POLR2J3-207ENST00000503564 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms