RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 NCOA1Q15788 1441 aa30.4■■■□□ 2.46
UBE2D3-215ENST00000503418 FAM135AQ9P2D6 1515 aa30.4■■■□□ 2.46
UBE2D3-215ENST00000503418 CEP170BQ9Y4F5 1589 aaPredicted RBP30.39■■■□□ 2.46
UBE2D3-215ENST00000503418 WASHC2CQ9Y4E1 1318 aa30.39■■■□□ 2.46
UBE2D3-215ENST00000503418 CERKQ8TCT0 537 aa30.38■■■□□ 2.45
UBE2D3-215ENST00000503418 PTPRTO14522 1441 aa30.37■■■□□ 2.45
UBE2D3-215ENST00000503418 CROCC2H7BZ55 1655 aa30.36■■■□□ 2.45
UBE2D3-215ENST00000503418 RNF17Q9BXT8 1623 aaKnown RBP30.35■■■□□ 2.45
UBE2D3-215ENST00000503418 EIF2AK4Q9P2K8 1649 aaKnown RBP30.34■■■□□ 2.45
UBE2D3-215ENST00000503418 FGD6Q6ZV73 1430 aa30.34■■■□□ 2.45
UBE2D3-215ENST00000503418 PZPP20742 1482 aa30.33■■■□□ 2.45
UBE2D3-215ENST00000503418 FBXO31Q5XUX0 539 aaPredicted RBP30.32■■■□□ 2.44
UBE2D3-215ENST00000503418 SHANK2Q9UPX8 1470 aa30.31■■■□□ 2.44
UBE2D3-215ENST00000503418 ABCC5O15440 1437 aa30.3■■■□□ 2.44
UBE2D3-215ENST00000503418 DUOX2Q9NRD8 1548 aa30.3■■■□□ 2.44
UBE2D3-215ENST00000503418 TNRQ92752 1358 aa30.29■■■□□ 2.44
UBE2D3-215ENST00000503418 A2ML1A8K2U0 1454 aa30.29■■■□□ 2.44
UBE2D3-215ENST00000503418 DNMT1P26358 1616 aaKnown RBP30.29■■■□□ 2.44
UBE2D3-215ENST00000503418 NCKAP5LQ9HCH0 1330 aa30.28■■■□□ 2.44
UBE2D3-215ENST00000503418 TCOF1Q13428 1488 aaKnown RBP30.28■■■□□ 2.44
UBE2D3-215ENST00000503418 DAPK1P53355 1430 aa30.28■■■□□ 2.44
UBE2D3-215ENST00000503418 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
UBE2D3-215ENST00000503418 PLA2R1Q13018 1463 aa30.27■■■□□ 2.44
UBE2D3-215ENST00000503418 KIF15Q9NS87 1388 aa30.27■■■□□ 2.44
UBE2D3-215ENST00000503418 ABCC3O15438 1527 aa30.26■■■□□ 2.43
UBE2D3-215ENST00000503418 RRP7BPQ9NSQ0 103 aa30.24■■■□□ 2.43
UBE2D3-215ENST00000503418 MROH1Q8NDA8 1641 aa30.24■■■□□ 2.43
UBE2D3-215ENST00000503418 CEP152O94986 1710 aa30.22■■■□□ 2.43
UBE2D3-215ENST00000503418 PKD2Q13563 968 aa30.22■■■□□ 2.43
UBE2D3-215ENST00000503418 ERBINQ96RT1 1412 aa30.19■■■□□ 2.42
UBE2D3-215ENST00000503418 CHIC2Q9UKJ5 165 aa30.18■■■□□ 2.42
UBE2D3-215ENST00000503418 LTBP4Q8N2S1 1624 aa30.16■■■□□ 2.42
UBE2D3-215ENST00000503418 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.42
UBE2D3-215ENST00000503418 NLRP1Q9C000 1473 aa30.14■■■□□ 2.42
UBE2D3-215ENST00000503418 PRDM15P57071 1507 aaPredicted RBP30.14■■■□□ 2.42
UBE2D3-215ENST00000503418 FAM50AQ14320 339 aaKnown RBP30.14■■■□□ 2.42
UBE2D3-215ENST00000503418 ANKRD30AQ9BXX3 1397 aa30.14■■■□□ 2.41
UBE2D3-215ENST00000503418 POLR1AO95602 1720 aaPredicted RBP30.13■■■□□ 2.41
UBE2D3-215ENST00000503418 SPATA31D1Q6ZQQ2 1576 aa30.12■■■□□ 2.41
UBE2D3-215ENST00000503418 UGGT1Q9NYU2 1555 aa30.11■■■□□ 2.41
UBE2D3-215ENST00000503418 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
UBE2D3-215ENST00000503418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.1■■■□□ 2.41
UBE2D3-215ENST00000503418 ZNF335Q9H4Z2 1342 aaPredicted RBP30.09■■■□□ 2.41
UBE2D3-215ENST00000503418 DEPDC5O75140 1603 aa30.08■■■□□ 2.41
UBE2D3-215ENST00000503418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.08■■■□□ 2.411e-10■■■□□ 14.9
UBE2D3-215ENST00000503418 THEMISQ8N1K5 641 aaPredicted RBP30.07■■■□□ 2.4
UBE2D3-215ENST00000503418 NEURL4Q96JN8 1562 aa30.05■■■□□ 2.4
UBE2D3-215ENST00000503418 KANK1Q14678 1352 aa30.04■■■□□ 2.4
UBE2D3-215ENST00000503418 ADGRL2O95490 1459 aa30.04■■■□□ 2.4
UBE2D3-215ENST00000503418 ANKLE2Q86XL3 938 aa30.02■■■□□ 2.4
UBE2D3-215ENST00000503418 IQSEC2Q5JU85 1478 aa30.01■■■□□ 2.4
UBE2D3-215ENST00000503418 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
UBE2D3-215ENST00000503418 UBR1Q8IWV7 1749 aa29.96■■■□□ 2.39
UBE2D3-215ENST00000503418 VWDEQ8N2E2 1590 aa29.94■■■□□ 2.38
UBE2D3-215ENST00000503418 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
UBE2D3-215ENST00000503418 LMTK2Q8IWU2 1503 aa29.93■■■□□ 2.38
UBE2D3-215ENST00000503418 NPHP4O75161 1426 aaPredicted RBP29.93■■■□□ 2.38
UBE2D3-215ENST00000503418 ANKRD50Q9ULJ7 1429 aa29.92■■■□□ 2.38
UBE2D3-215ENST00000503418 MED14O60244 1454 aa29.91■■■□□ 2.38
UBE2D3-215ENST00000503418 IQGAP1P46940 1657 aa29.91■■■□□ 2.38
UBE2D3-215ENST00000503418 EFCAB6Q5THR3 1501 aa29.87■■■□□ 2.37
UBE2D3-215ENST00000503418 PIK3C2BO00750 1634 aa29.86■■■□□ 2.37
UBE2D3-215ENST00000503418 CPS1P31327 1500 aa29.84■■■□□ 2.37
UBE2D3-215ENST00000503418 UBAP1LF5GYI3 381 aa29.83■■■□□ 2.37
UBE2D3-215ENST00000503418 ITGAEP38570 1179 aa29.82■■■□□ 2.36
UBE2D3-215ENST00000503418 STAG3Q9UJ98 1225 aa29.82■■■□□ 2.36
UBE2D3-215ENST00000503418 SCAF11Q99590 1463 aaKnown RBP29.81■■■□□ 2.36
UBE2D3-215ENST00000503418 SYNMO15061 1565 aa29.81■■■□□ 2.36
UBE2D3-215ENST00000503418 SLIT1O75093 1534 aa29.8■■■□□ 2.36
UBE2D3-215ENST00000503418 ARHGAP23Q9P227 1491 aa29.8■■■□□ 2.36
UBE2D3-215ENST00000503418 ROCK1Q13464 1354 aa29.79■■■□□ 2.36
UBE2D3-215ENST00000503418 IDI1Q13907 227 aa29.77■■■□□ 2.36
UBE2D3-215ENST00000503418 TXNDC2Q86VQ3 553 aa29.77■■■□□ 2.36
UBE2D3-215ENST00000503418 NOS1P29475 1434 aa29.77■■■□□ 2.36
UBE2D3-215ENST00000503418 UNC13BO14795 1591 aa29.77■■■□□ 2.36
UBE2D3-215ENST00000503418 TET3O43151 1660 aa29.76■■■□□ 2.36
UBE2D3-215ENST00000503418 LTKP29376 864 aa29.76■■■□□ 2.35
UBE2D3-215ENST00000503418 KDM5AP29375 1690 aaKnown RBP29.76■■■□□ 2.35
UBE2D3-215ENST00000503418 EID1Q9Y6B2 187 aa29.75■■■□□ 2.35
UBE2D3-215ENST00000503418 RPRD2Q5VT52 1461 aaKnown RBP29.74■■■□□ 2.35
UBE2D3-215ENST00000503418 GCC2Q8IWJ2 1684 aa29.73■■■□□ 2.35
UBE2D3-215ENST00000503418 TMEM2Q9UHN6 1383 aa29.73■■■□□ 2.35
UBE2D3-215ENST00000503418 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
UBE2D3-215ENST00000503418 ADGRB3O60242 1522 aa29.7■■■□□ 2.34
UBE2D3-215ENST00000503418 SLC52A1Q9NWF4 448 aa29.68■■■□□ 2.34
UBE2D3-215ENST00000503418 SCAF1Q9H7N4 1312 aaKnown RBP29.67■■■□□ 2.34
UBE2D3-215ENST00000503418 IQGAP3Q86VI3 1631 aa29.66■■■□□ 2.34
UBE2D3-215ENST00000503418 E9PCH4 1651 aa29.64■■■□□ 2.34
UBE2D3-215ENST00000503418 TOM1O60784 492 aa29.64■■■□□ 2.34
UBE2D3-215ENST00000503418 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
UBE2D3-215ENST00000503418 MYO5BQ9ULV0 1848 aa29.63■■■□□ 2.33
UBE2D3-215ENST00000503418 LRRC7Q96NW7 1537 aa29.62■■■□□ 2.33
UBE2D3-215ENST00000503418 NUP155O75694 1391 aa29.61■■■□□ 2.33
UBE2D3-215ENST00000503418 RRBP1Q9P2E9 1410 aaKnown RBP29.61■■■□□ 2.33
UBE2D3-215ENST00000503418 DISP3Q9P2K9 1392 aa29.58■■■□□ 2.33
UBE2D3-215ENST00000503418 TMEM131LA2VDJ0 1609 aa29.55■■■□□ 2.32
UBE2D3-215ENST00000503418 CHGAP10645 457 aaKnown RBP29.54■■■□□ 2.32
UBE2D3-215ENST00000503418 BCANQ96GW7 911 aa29.53■■■□□ 2.32
UBE2D3-215ENST00000503418 SLC26A8Q96RN1 970 aa29.53■■■□□ 2.32
UBE2D3-215ENST00000503418 ALKQ9UM73 1620 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms