RNA–Protein interactions for RNA: ENST00000503340.1

MATR3-205, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-205ENST00000503340 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
MATR3-205ENST00000503340 A2MP01023 1474 aa13.34□□□□□ -0.27
MATR3-205ENST00000503340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.27
MATR3-205ENST00000503340 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
MATR3-205ENST00000503340 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
MATR3-205ENST00000503340 GGT6Q6P531 493 aa13.33□□□□□ -0.28
MATR3-205ENST00000503340 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
MATR3-205ENST00000503340 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
MATR3-205ENST00000503340 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
MATR3-205ENST00000503340 KIAA1107Q9UPP5 1409 aa13.32□□□□□ -0.28
MATR3-205ENST00000503340 CFDP1Q9UEE9 299 aaPredicted RBP13.31□□□□□ -0.28
MATR3-205ENST00000503340 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
MATR3-205ENST00000503340 PKD2Q13563 968 aa13.3□□□□□ -0.28
MATR3-205ENST00000503340 ZNF644Q9H582 1327 aaPredicted RBP13.3□□□□□ -0.28
MATR3-205ENST00000503340 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
MATR3-205ENST00000503340 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
MATR3-205ENST00000503340 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
MATR3-205ENST00000503340 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
MATR3-205ENST00000503340 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
MATR3-205ENST00000503340 MBD5Q9P267 1494 aa13.26□□□□□ -0.29
MATR3-205ENST00000503340 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
MATR3-205ENST00000503340 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
MATR3-205ENST00000503340 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
MATR3-205ENST00000503340 HSPA1LP34931 641 aa13.24□□□□□ -0.29
MATR3-205ENST00000503340 PIP4K2BP78356 416 aa13.22□□□□□ -0.29
MATR3-205ENST00000503340 DHX29Q7Z478 1369 aaKnown RBP13.21□□□□□ -0.29
MATR3-205ENST00000503340 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
MATR3-205ENST00000503340 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
MATR3-205ENST00000503340 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
MATR3-205ENST00000503340 FAM50AQ14320 339 aaKnown RBP13.21□□□□□ -0.29
MATR3-205ENST00000503340 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
MATR3-205ENST00000503340 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.3
MATR3-205ENST00000503340 TNRQ92752 1358 aa13.2□□□□□ -0.3
MATR3-205ENST00000503340 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
MATR3-205ENST00000503340 PZPP20742 1482 aa13.19□□□□□ -0.3
MATR3-205ENST00000503340 KIF3BO15066 747 aa13.19□□□□□ -0.3
MATR3-205ENST00000503340 ALKQ9UM73 1620 aa13.19□□□□□ -0.3
MATR3-205ENST00000503340 VWDEQ8N2E2 1590 aa13.19□□□□□ -0.3
MATR3-205ENST00000503340 CPS1P31327 1500 aa13.18□□□□□ -0.3
MATR3-205ENST00000503340 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
MATR3-205ENST00000503340 HRCP23327 699 aa13.18□□□□□ -0.3
MATR3-205ENST00000503340 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
MATR3-205ENST00000503340 TOM1O60784 492 aa13.16□□□□□ -0.3
MATR3-205ENST00000503340 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
MATR3-205ENST00000503340 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
MATR3-205ENST00000503340 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
MATR3-205ENST00000503340 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
MATR3-205ENST00000503340 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
MATR3-205ENST00000503340 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
MATR3-205ENST00000503340 MED14O60244 1454 aa13.13□□□□□ -0.31
MATR3-205ENST00000503340 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
MATR3-205ENST00000503340 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
MATR3-205ENST00000503340 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
MATR3-205ENST00000503340 DEPDC5O75140 1603 aa13.12□□□□□ -0.31
MATR3-205ENST00000503340 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
MATR3-205ENST00000503340 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
MATR3-205ENST00000503340 ITGAEP38570 1179 aa13.11□□□□□ -0.31
MATR3-205ENST00000503340 THEMISQ8N1K5 641 aaPredicted RBP13.11□□□□□ -0.31
MATR3-205ENST00000503340 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
MATR3-205ENST00000503340 IQGAP1P46940 1657 aa13.1□□□□□ -0.31
MATR3-205ENST00000503340 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
MATR3-205ENST00000503340 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
MATR3-205ENST00000503340 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
MATR3-205ENST00000503340 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
MATR3-205ENST00000503340 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
MATR3-205ENST00000503340 ABCC3O15438 1527 aa13.08□□□□□ -0.32
MATR3-205ENST00000503340 DAPK1P53355 1430 aa13.07□□□□□ -0.32
MATR3-205ENST00000503340 RNF17Q9BXT8 1623 aaKnown RBP13.07□□□□□ -0.32
MATR3-205ENST00000503340 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
MATR3-205ENST00000503340 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
MATR3-205ENST00000503340 ERVK-7P63135 1459 aa13.06□□□□□ -0.32
MATR3-205ENST00000503340 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
MATR3-205ENST00000503340 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
MATR3-205ENST00000503340 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
MATR3-205ENST00000503340 ABCC5O15440 1437 aa13.05□□□□□ -0.32
MATR3-205ENST00000503340 SYNMO15061 1565 aa13.04□□□□□ -0.32
MATR3-205ENST00000503340 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
MATR3-205ENST00000503340 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
MATR3-205ENST00000503340 GCC2Q8IWJ2 1684 aa13.04□□□□□ -0.32
MATR3-205ENST00000503340 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
MATR3-205ENST00000503340 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
MATR3-205ENST00000503340 NAIPQ13075 1403 aa13.03□□□□□ -0.32
MATR3-205ENST00000503340 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
MATR3-205ENST00000503340 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
MATR3-205ENST00000503340 LTKP29376 864 aa13.02□□□□□ -0.33
MATR3-205ENST00000503340 ADGRL2O95490 1459 aa13.02□□□□□ -0.33
MATR3-205ENST00000503340 CEP152O94986 1710 aa13.02□□□□□ -0.33
MATR3-205ENST00000503340 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
MATR3-205ENST00000503340 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
MATR3-205ENST00000503340 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
MATR3-205ENST00000503340 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
MATR3-205ENST00000503340 ARHGAP23Q9P227 1491 aa12.99□□□□□ -0.33
MATR3-205ENST00000503340 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
MATR3-205ENST00000503340 SLIT1O75093 1534 aa12.98□□□□□ -0.33
MATR3-205ENST00000503340 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
MATR3-205ENST00000503340 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
MATR3-205ENST00000503340 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
MATR3-205ENST00000503340 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
MATR3-205ENST00000503340 DUOX2Q9NRD8 1548 aa12.95□□□□□ -0.34
MATR3-205ENST00000503340 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms