RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 GGT6Q6P531 493 aa19.35■□□□□ 0.69
TNPO1-202ENST00000503084 TNRQ92752 1358 aa19.34■□□□□ 0.69
TNPO1-202ENST00000503084 IQGAP1P46940 1657 aa19.34■□□□□ 0.69
TNPO1-202ENST00000503084 ANKLE2Q86XL3 938 aa19.32■□□□□ 0.68
TNPO1-202ENST00000503084 FBXO31Q5XUX0 539 aaPredicted RBP19.27■□□□□ 0.68
TNPO1-202ENST00000503084 PZPP20742 1482 aa19.27■□□□□ 0.67
TNPO1-202ENST00000503084 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.67
TNPO1-202ENST00000503084 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
TNPO1-202ENST00000503084 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
TNPO1-202ENST00000503084 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
TNPO1-202ENST00000503084 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
TNPO1-202ENST00000503084 UPF1Q92900 1129 aaKnown RBP eCLIP19.24■□□□□ 0.67
TNPO1-202ENST00000503084 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
TNPO1-202ENST00000503084 EEA1Q15075 1411 aa19.23■□□□□ 0.67
TNPO1-202ENST00000503084 XIRP1Q702N8 1843 aaKnown RBP19.23■□□□□ 0.67
TNPO1-202ENST00000503084 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
TNPO1-202ENST00000503084 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
TNPO1-202ENST00000503084 KDM5DQ9BY66 1539 aa19.21■□□□□ 0.67
TNPO1-202ENST00000503084 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
TNPO1-202ENST00000503084 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
TNPO1-202ENST00000503084 KIAA1107Q9UPP5 1409 aa19.18■□□□□ 0.66
TNPO1-202ENST00000503084 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
TNPO1-202ENST00000503084 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
TNPO1-202ENST00000503084 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
TNPO1-202ENST00000503084 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
TNPO1-202ENST00000503084 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
TNPO1-202ENST00000503084 TRIM52Q96A61 297 aa19.1■□□□□ 0.65
TNPO1-202ENST00000503084 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
TNPO1-202ENST00000503084 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.65
TNPO1-202ENST00000503084 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
TNPO1-202ENST00000503084 LRP6O75581 1613 aa19.06■□□□□ 0.64
TNPO1-202ENST00000503084 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 KIF3BO15066 747 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 PHLPP1O60346 1717 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 JCADQ9P266 1359 aa19.05■□□□□ 0.64
TNPO1-202ENST00000503084 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
TNPO1-202ENST00000503084 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
TNPO1-202ENST00000503084 TMEM94Q12767 1356 aa19.04■□□□□ 0.64
TNPO1-202ENST00000503084 UBR1Q8IWV7 1749 aa19.03■□□□□ 0.64
TNPO1-202ENST00000503084 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
TNPO1-202ENST00000503084 MBD5Q9P267 1494 aa19.02■□□□□ 0.63
TNPO1-202ENST00000503084 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
TNPO1-202ENST00000503084 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
TNPO1-202ENST00000503084 NCOA2Q15596 1464 aa19■□□□□ 0.63
TNPO1-202ENST00000503084 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
TNPO1-202ENST00000503084 ARHGAP23Q9P227 1491 aa18.99■□□□□ 0.63
TNPO1-202ENST00000503084 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
TNPO1-202ENST00000503084 LTKP29376 864 aa18.98■□□□□ 0.63
TNPO1-202ENST00000503084 ZNF772Q68DY9 489 aaPredicted RBP18.98■□□□□ 0.63
TNPO1-202ENST00000503084 SLIT1O75093 1534 aa18.98■□□□□ 0.63
TNPO1-202ENST00000503084 ZNF644Q9H582 1327 aaPredicted RBP18.98■□□□□ 0.63
TNPO1-202ENST00000503084 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
TNPO1-202ENST00000503084 ABCC3O15438 1527 aa18.97■□□□□ 0.63
TNPO1-202ENST00000503084 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
TNPO1-202ENST00000503084 TIAM1Q13009 1591 aa18.95■□□□□ 0.62
TNPO1-202ENST00000503084 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
TNPO1-202ENST00000503084 RBM33Q96EV2 1170 aaKnown RBP18.94■□□□□ 0.62
TNPO1-202ENST00000503084 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
TNPO1-202ENST00000503084 RXRBP28702 533 aa18.92■□□□□ 0.62
TNPO1-202ENST00000503084 PRDM15P57071 1507 aaPredicted RBP18.91■□□□□ 0.62
TNPO1-202ENST00000503084 SPATA31A6Q5VVP1 1343 aa18.91■□□□□ 0.62
TNPO1-202ENST00000503084 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
TNPO1-202ENST00000503084 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
TNPO1-202ENST00000503084 RGS12O14924 1447 aa18.89■□□□□ 0.61
TNPO1-202ENST00000503084 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
TNPO1-202ENST00000503084 NWD1Q149M9 1564 aa18.88■□□□□ 0.61
TNPO1-202ENST00000503084 SHPRHQ149N8 1683 aa18.88■□□□□ 0.61
TNPO1-202ENST00000503084 MSH6P52701 1360 aa18.87■□□□□ 0.61
TNPO1-202ENST00000503084 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
TNPO1-202ENST00000503084 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
TNPO1-202ENST00000503084 KCNA6P17658 529 aa18.86■□□□□ 0.61
TNPO1-202ENST00000503084 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
TNPO1-202ENST00000503084 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
TNPO1-202ENST00000503084 EID1Q9Y6B2 187 aa18.85■□□□□ 0.61
TNPO1-202ENST00000503084 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
TNPO1-202ENST00000503084 CEP152O94986 1710 aa18.84■□□□□ 0.61
TNPO1-202ENST00000503084 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.6
TNPO1-202ENST00000503084 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
TNPO1-202ENST00000503084 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
TNPO1-202ENST00000503084 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
TNPO1-202ENST00000503084 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
TNPO1-202ENST00000503084 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
TNPO1-202ENST00000503084 TET3O43151 1660 aa18.8■□□□□ 0.6
TNPO1-202ENST00000503084 AFF2P51816 1311 aa18.78■□□□□ 0.6
TNPO1-202ENST00000503084 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
TNPO1-202ENST00000503084 DIP2AQ14689 1571 aa18.77■□□□□ 0.6
TNPO1-202ENST00000503084 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
TNPO1-202ENST00000503084 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
TNPO1-202ENST00000503084 EP400Q96L91 3159 aa18.75■□□□□ 0.59
TNPO1-202ENST00000503084 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
TNPO1-202ENST00000503084 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
TNPO1-202ENST00000503084 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
TNPO1-202ENST00000503084 NUTM2DQ5VT03 806 aaPredicted RBP18.75■□□□□ 0.59
TNPO1-202ENST00000503084 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
TNPO1-202ENST00000503084 EFCAB6Q5THR3 1501 aa18.74■□□□□ 0.59
TNPO1-202ENST00000503084 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
TNPO1-202ENST00000503084 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
TNPO1-202ENST00000503084 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms