RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 BBXQ8WY36 941 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-203ENST00000502998 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-203ENST00000502998 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
CLCN3-203ENST00000502998 UACAQ9BZF9 1416 aa8.83□□□□□ -1
CLCN3-203ENST00000502998 RTL5Q5HYW3 569 aaPredicted RBP8.83□□□□□ -1
CLCN3-203ENST00000502998 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
CLCN3-203ENST00000502998 KIAA0556O60303 1618 aa8.83□□□□□ -1
CLCN3-203ENST00000502998 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
CLCN3-203ENST00000502998 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
CLCN3-203ENST00000502998 PLB1Q6P1J6 1458 aa8.82□□□□□ -1
CLCN3-203ENST00000502998 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
CLCN3-203ENST00000502998 EPRSP07814 1512 aaKnown RBP8.81□□□□□ -1
CLCN3-203ENST00000502998 UBTFP17480 764 aaKnown RBP8.81□□□□□ -1
CLCN3-203ENST00000502998 FBXO41Q8TF61 875 aa8.81□□□□□ -1
CLCN3-203ENST00000502998 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
CLCN3-203ENST00000502998 IGSF3O75054 1194 aa8.8□□□□□ -1
CLCN3-203ENST00000502998 SECISBP2LQ93073 1101 aaKnown RBP8.8□□□□□ -1
CLCN3-203ENST00000502998 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
CLCN3-203ENST00000502998 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
CLCN3-203ENST00000502998 PRXQ9BXM0 1461 aa8.79□□□□□ -1
CLCN3-203ENST00000502998 GTF2E1P29083 439 aaPredicted RBP8.79□□□□□ -1
CLCN3-203ENST00000502998 HSP90AA2PQ14568 343 aaPredicted RBP8.79□□□□□ -1
CLCN3-203ENST00000502998 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
CLCN3-203ENST00000502998 ZCCHC11Q5TAX3 1644 aaKnown RBP8.79□□□□□ -1
CLCN3-203ENST00000502998 NEFMP07197 916 aa8.78□□□□□ -1
CLCN3-203ENST00000502998 PTMAP06454 111 aaKnown RBP8.77□□□□□ -1.01
CLCN3-203ENST00000502998 IRX6P78412 446 aaPredicted RBP8.77□□□□□ -1.01
CLCN3-203ENST00000502998 CHADLQ6NUI6 762 aa8.77□□□□□ -1.01
CLCN3-203ENST00000502998 GOLGA3Q08378 1498 aa8.77□□□□□ -1.01
CLCN3-203ENST00000502998 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
CLCN3-203ENST00000502998 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
CLCN3-203ENST00000502998 PTMSP20962 102 aa8.75□□□□□ -1.01
CLCN3-203ENST00000502998 MCCP23508 829 aa8.75□□□□□ -1.01
CLCN3-203ENST00000502998 CNPY4Q8N129 248 aa8.75□□□□□ -1.01
CLCN3-203ENST00000502998 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
CLCN3-203ENST00000502998 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
CLCN3-203ENST00000502998 ABCA8O94911 1581 aa8.74□□□□□ -1.01
CLCN3-203ENST00000502998 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
CLCN3-203ENST00000502998 WASHC2CQ9Y4E1 1318 aa8.74□□□□□ -1.01
CLCN3-203ENST00000502998 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
CLCN3-203ENST00000502998 WDR7Q9Y4E6 1490 aa8.73□□□□□ -1.01
CLCN3-203ENST00000502998 SETQ01105 290 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-203ENST00000502998 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
CLCN3-203ENST00000502998 PRDM4Q9UKN5 801 aa8.73□□□□□ -1.01
CLCN3-203ENST00000502998 ANP32BQ92688 251 aaKnown RBP8.72□□□□□ -1.01
CLCN3-203ENST00000502998 PSMD1Q99460 953 aa8.72□□□□□ -1.01
CLCN3-203ENST00000502998 KIF21BO75037 1637 aa8.72□□□□□ -1.01
CLCN3-203ENST00000502998 CLGNO14967 610 aa8.71□□□□□ -1.02
CLCN3-203ENST00000502998 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
CLCN3-203ENST00000502998 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
CLCN3-203ENST00000502998 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
CLCN3-203ENST00000502998 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
CLCN3-203ENST00000502998 MAGI3Q5TCQ9 1506 aa8.7□□□□□ -1.02
CLCN3-203ENST00000502998 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 CD109Q6YHK3 1445 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 PTPRMP28827 1452 aa8.69□□□□□ -1.02
CLCN3-203ENST00000502998 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 HSP90AA1P07900 732 aaKnown RBP8.68□□□□□ -1.02
CLCN3-203ENST00000502998 CLCN6P51797 869 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 BRPF3Q9ULD4 1205 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 WASHC2AQ641Q2 1341 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 EEA1Q15075 1411 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 ADAMTSL3P82987 1691 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 CFAP43Q8NDM7 1665 aa8.68□□□□□ -1.02
CLCN3-203ENST00000502998 ATP10BO94823 1461 aa8.67□□□□□ -1.02
CLCN3-203ENST00000502998 POTEIP0CG38 1075 aa8.67□□□□□ -1.02
CLCN3-203ENST00000502998 LMTK3Q96Q04 1460 aa8.67□□□□□ -1.02
CLCN3-203ENST00000502998 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
CLCN3-203ENST00000502998 AXDND1Q5T1B0 1012 aaPredicted RBP8.66□□□□□ -1.02
CLCN3-203ENST00000502998 ZNF622Q969S3 477 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLCN3-203ENST00000502998 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.02
CLCN3-203ENST00000502998 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
CLCN3-203ENST00000502998 ARAP3Q8WWN8 1544 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-203ENST00000502998 PHF14O94880 888 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 MMP14P50281 582 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 HSPA2P54652 639 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 FAM193AP78312 1265 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 CC2D2BQ6DHV5 1058 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 PRDM10Q9NQV6 1147 aa8.64□□□□□ -1.03
CLCN3-203ENST00000502998 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-203ENST00000502998 PCF11O94913 1555 aaKnown RBP8.64□□□□□ -1.03
CLCN3-203ENST00000502998 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
CLCN3-203ENST00000502998 RAPGEF3O95398 923 aa8.63□□□□□ -1.03
CLCN3-203ENST00000502998 NUP153P49790 1475 aaKnown RBP8.62□□□□□ -1.03
CLCN3-203ENST00000502998 ABCA9Q8IUA7 1624 aa8.62□□□□□ -1.03
CLCN3-203ENST00000502998 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
CLCN3-203ENST00000502998 RGS22Q8NE09 1264 aa8.61□□□□□ -1.03
CLCN3-203ENST00000502998 CFAP44Q96MT7 982 aa8.61□□□□□ -1.03
CLCN3-203ENST00000502998 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
CLCN3-203ENST00000502998 ANP32AP39687 249 aaKnown RBP8.6□□□□□ -1.03
CLCN3-203ENST00000502998 PDCL3Q9H2J4 239 aa8.6□□□□□ -1.03
CLCN3-203ENST00000502998 KCNG1Q9UIX4 513 aa8.6□□□□□ -1.03
CLCN3-203ENST00000502998 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
CLCN3-203ENST00000502998 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
CLCN3-203ENST00000502998 SOCS7O14512 581 aa8.59□□□□□ -1.03
CLCN3-203ENST00000502998 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms