RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.63■■■■□ 3.14
HMCES-204ENST00000502878 DIP2CQ9Y2E4 1556 aa34.62■■■■□ 3.13
HMCES-204ENST00000502878 FOXD1Q16676 465 aa34.61■■■■□ 3.13
HMCES-204ENST00000502878 KIF3BO15066 747 aa34.6■■■■□ 3.13
HMCES-204ENST00000502878 SIN3AQ96ST3 1273 aa34.59■■■■□ 3.13
HMCES-204ENST00000502878 MAGI2Q86UL8 1455 aa34.58■■■■□ 3.13
HMCES-204ENST00000502878 EIF2AK4Q9P2K8 1649 aaKnown RBP34.57■■■■□ 3.12
HMCES-204ENST00000502878 FAM135AQ9P2D6 1515 aa34.56■■■■□ 3.12
HMCES-204ENST00000502878 PKD2Q13563 968 aa34.55■■■■□ 3.12
HMCES-204ENST00000502878 NEUROD1Q13562 356 aa34.52■■■■□ 3.12
HMCES-204ENST00000502878 DEPDC5O75140 1603 aa34.51■■■■□ 3.12
HMCES-204ENST00000502878 IQGAP3Q86VI3 1631 aa34.5■■■■□ 3.11
HMCES-204ENST00000502878 ANKRD30BQ9BXX2 1392 aa34.47■■■■□ 3.11
HMCES-204ENST00000502878 ATP10AO60312 1499 aa34.46■■■■□ 3.11
HMCES-204ENST00000502878 MROH1Q8NDA8 1641 aa34.45■■■■□ 3.11
HMCES-204ENST00000502878 PRDM15P57071 1507 aaPredicted RBP34.43■■■■□ 3.1
HMCES-204ENST00000502878 RNF17Q9BXT8 1623 aaKnown RBP34.42■■■■□ 3.1
HMCES-204ENST00000502878 BCORL1Q5H9F3 1711 aa34.41■■■■□ 3.1
HMCES-204ENST00000502878 KANK1Q14678 1352 aa34.41■■■■□ 3.1
HMCES-204ENST00000502878 VWDEQ8N2E2 1590 aa34.4■■■■□ 3.1
HMCES-204ENST00000502878 GGT6Q6P531 493 aa34.39■■■■□ 3.1
HMCES-204ENST00000502878 ARHGEF40Q8TER5 1519 aa34.39■■■■□ 3.1
HMCES-204ENST00000502878 REREQ9P2R6 1566 aa34.35■■■■□ 3.09
HMCES-204ENST00000502878 TET3O43151 1660 aa34.29■■■■□ 3.08
HMCES-204ENST00000502878 SIGLEC1Q9BZZ2 1709 aa34.27■■■■□ 3.08
HMCES-204ENST00000502878 AGLP35573 1532 aa34.27■■■■□ 3.08
HMCES-204ENST00000502878 TIMELESSQ9UNS1 1208 aa34.27■■■■□ 3.08
HMCES-204ENST00000502878 RPRD2Q5VT52 1461 aaKnown RBP34.26■■■■□ 3.08
HMCES-204ENST00000502878 TONSLQ96HA7 1378 aa34.26■■■■□ 3.07
HMCES-204ENST00000502878 E9PCH4 1651 aa34.26■■■■□ 3.07
HMCES-204ENST00000502878 LMTK2Q8IWU2 1503 aa34.25■■■■□ 3.07
HMCES-204ENST00000502878 CEP152O94986 1710 aa34.24■■■■□ 3.07
HMCES-204ENST00000502878 PLA2R1Q13018 1463 aa34.24■■■■□ 3.07
HMCES-204ENST00000502878 WASHC2CQ9Y4E1 1318 aa34.23■■■■□ 3.07
HMCES-204ENST00000502878 ABCC3O15438 1527 aa34.21■■■■□ 3.07
HMCES-204ENST00000502878 EFCAB6Q5THR3 1501 aa34.19■■■■□ 3.06
HMCES-204ENST00000502878 CCDC144AA2RUR9 1427 aa34.13■■■■□ 3.05
HMCES-204ENST00000502878 MLECQ14165 292 aa34.12■■■■□ 3.05
HMCES-204ENST00000502878 PPP1R15AO75807 674 aaPredicted RBP34.12■■■■□ 3.05
HMCES-204ENST00000502878 PTPRTO14522 1441 aa34.11■■■■□ 3.05
HMCES-204ENST00000502878 L3MBTL2Q969R5 705 aa34.11■■■■□ 3.05
HMCES-204ENST00000502878 ZC3H13Q5T200 1668 aaKnown RBP34.1■■■■□ 3.05
HMCES-204ENST00000502878 NPATQ14207 1427 aa34.1■■■■□ 3.05
HMCES-204ENST00000502878 CAMSAP1Q5T5Y3 1602 aa34.09■■■■□ 3.05
HMCES-204ENST00000502878 ARID4BQ4LE39 1312 aaPredicted RBP34.09■■■■□ 3.05
HMCES-204ENST00000502878 SPHKAPQ2M3C7 1700 aa34.08■■■■□ 3.05
HMCES-204ENST00000502878 PPP6R1Q9UPN7 881 aa34.07■■■■□ 3.05
HMCES-204ENST00000502878 TRPM2O94759 1503 aa34.06■■■■□ 3.04
HMCES-204ENST00000502878 ARHGAP31Q2M1Z3 1444 aa34.01■■■■□ 3.03
HMCES-204ENST00000502878 CLTCL1P53675 1640 aa33.97■■■■□ 3.03
HMCES-204ENST00000502878 CLTCQ00610 1675 aaKnown RBP33.96■■■■□ 3.03
HMCES-204ENST00000502878 CFAP65Q6ZU64 1925 aaKnown RBP33.95■■■■□ 3.02
HMCES-204ENST00000502878 UGGT1Q9NYU2 1555 aa33.94■■■■□ 3.02
HMCES-204ENST00000502878 RGL3Q3MIN7 710 aa33.92■■■■□ 3.02
HMCES-204ENST00000502878 NOS1P29475 1434 aa33.92■■■■□ 3.02
HMCES-204ENST00000502878 CNTLNQ9NXG0 1405 aa33.92■■■■□ 3.02
HMCES-204ENST00000502878 ESF1Q9H501 851 aaKnown RBP33.91■■■■□ 3.02
HMCES-204ENST00000502878 SPATA31E1Q6ZUB1 1445 aa33.88■■■■□ 3.01
HMCES-204ENST00000502878 FBXO31Q5XUX0 539 aaPredicted RBP33.86■■■■□ 3.01
HMCES-204ENST00000502878 NBPF8Q3BBV2 869 aa33.85■■■■□ 3.01
HMCES-204ENST00000502878 DCAF11Q8TEB1 546 aa33.85■■■■□ 3.01
HMCES-204ENST00000502878 SYNMO15061 1565 aa33.85■■■■□ 3.01
HMCES-204ENST00000502878 PREX1Q8TCU6 1659 aa33.83■■■■□ 3.01
HMCES-204ENST00000502878 ZMYM3Q14202 1370 aa33.83■■■■□ 3.01
HMCES-204ENST00000502878 KDM2AQ9Y2K7 1162 aa33.83■■■■□ 3.01
HMCES-204ENST00000502878 ERVK-7P63135 1459 aa33.81■■■■□ 3
HMCES-204ENST00000502878 ZNF326Q5BKZ1 582 aaKnown RBP33.78■■■■□ 3
HMCES-204ENST00000502878 PIK3C2BO00750 1634 aa33.76■■■■□ 3
HMCES-204ENST00000502878 KIF1BO60333 1816 aa33.75■■■□□ 2.99
HMCES-204ENST00000502878 NEURL4Q96JN8 1562 aa33.74■■■□□ 2.99
HMCES-204ENST00000502878 UHRF1BP1Q6BDS2 1440 aa33.74■■■□□ 2.99
HMCES-204ENST00000502878 CHGAP10645 457 aaKnown RBP33.74■■■□□ 2.99
HMCES-204ENST00000502878 IDI1Q13907 227 aa33.74■■■□□ 2.99
HMCES-204ENST00000502878 SLC52A1Q9NWF4 448 aa33.73■■■□□ 2.99
HMCES-204ENST00000502878 SPATA31D1Q6ZQQ2 1576 aa33.72■■■□□ 2.99
HMCES-204ENST00000502878 ZNF316A6NFI3 1004 aaPredicted RBP33.72■■■□□ 2.99
HMCES-204ENST00000502878 MROH2AA6NES4 1674 aa33.72■■■□□ 2.99
HMCES-204ENST00000502878 ADGRB3O60242 1522 aa33.71■■■□□ 2.99
HMCES-204ENST00000502878 FER1L4A9Z1Z3 1794 aa33.69■■■□□ 2.98
HMCES-204ENST00000502878 PRAG1Q86YV5 1406 aa33.66■■■□□ 2.98
HMCES-204ENST00000502878 CEBPAP49715 358 aaPredicted RBP33.64■■■□□ 2.98
HMCES-204ENST00000502878 MADDQ8WXG6 1647 aa33.59■■■□□ 2.97
HMCES-204ENST00000502878 STAC3Q96MF2 364 aa33.59■■■□□ 2.97
HMCES-204ENST00000502878 C3P01024 1663 aa33.58■■■□□ 2.97
HMCES-204ENST00000502878 RALGAPBQ86X10 1494 aa33.58■■■□□ 2.97
HMCES-204ENST00000502878 TNRQ92752 1358 aa33.58■■■□□ 2.97
HMCES-204ENST00000502878 TMEM131LA2VDJ0 1609 aa33.57■■■□□ 2.96
HMCES-204ENST00000502878 PLPPR3Q6T4P5 718 aa33.56■■■□□ 2.96
HMCES-204ENST00000502878 IFT172Q9UG01 1749 aa33.55■■■□□ 2.96
HMCES-204ENST00000502878 HIRIP3Q9BW71 556 aaPredicted RBP33.55■■■□□ 2.96
HMCES-204ENST00000502878 ADAMTSL3P82987 1691 aa33.55■■■□□ 2.96
HMCES-204ENST00000502878 RPGRIP1LQ68CZ1 1315 aa33.54■■■□□ 2.96
HMCES-204ENST00000502878 MYOM2P54296 1465 aa33.53■■■□□ 2.96
HMCES-204ENST00000502878 TRPM1Q7Z4N2 1603 aa33.52■■■□□ 2.96
HMCES-204ENST00000502878 ADGRF5Q8IZF2 1346 aa33.52■■■□□ 2.96
HMCES-204ENST00000502878 RIMS1Q86UR5 1692 aaKnown RBP33.52■■■□□ 2.96
HMCES-204ENST00000502878 STAG3Q9UJ98 1225 aa33.52■■■□□ 2.96
HMCES-204ENST00000502878 MYO5BQ9ULV0 1848 aa33.51■■■□□ 2.95
HMCES-204ENST00000502878 PPLO60437 1756 aa33.49■■■□□ 2.95
HMCES-204ENST00000502878 NBPF1Q3BBV0 1214 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms