RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CLCN1P35523 988 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
HMGB1P3-201ENST00000502802 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
HMGB1P3-201ENST00000502802 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
HMGB1P3-201ENST00000502802 PCDHGA4Q9Y5G9 962 aa10.04□□□□□ -0.8
HMGB1P3-201ENST00000502802 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
HMGB1P3-201ENST00000502802 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 FBXW7Q969H0 707 aa10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
HMGB1P3-201ENST00000502802 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
HMGB1P3-201ENST00000502802 PHOX2BQ99453 314 aa10.01□□□□□ -0.81
HMGB1P3-201ENST00000502802 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
HMGB1P3-201ENST00000502802 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
HMGB1P3-201ENST00000502802 JPH4Q96JJ6 628 aa10□□□□□ -0.81
HMGB1P3-201ENST00000502802 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
HMGB1P3-201ENST00000502802 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
HMGB1P3-201ENST00000502802 OATP04181 439 aa9.98□□□□□ -0.81
HMGB1P3-201ENST00000502802 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
HMGB1P3-201ENST00000502802 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
HMGB1P3-201ENST00000502802 UBTFP17480 764 aaKnown RBP9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 FOSBP53539 338 aa9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
HMGB1P3-201ENST00000502802 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 C6orf132Q5T0Z8 1188 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 PADI6Q6TGC4 694 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P3-201ENST00000502802 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
HMGB1P3-201ENST00000502802 A6NJR5 290 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
HMGB1P3-201ENST00000502802 APBB1O00213 710 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ARID3AQ99856 593 aa9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
HMGB1P3-201ENST00000502802 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P3-201ENST00000502802 MCM6Q14566 821 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 CLUAP1Q96AJ1 413 aa9.9□□□□□ -0.82
HMGB1P3-201ENST00000502802 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P3-201ENST00000502802 TRAK2O60296 914 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 POLR3EQ9NVU0 708 aa9.88□□□□□ -0.83
HMGB1P3-201ENST00000502802 NUDT7P0C024 238 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 PRSS12P56730 875 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
HMGB1P3-201ENST00000502802 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB1P3-201ENST00000502802 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 KHSRPQ92945 711 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
HMGB1P3-201ENST00000502802 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 TBC1D2Q9BYX2 928 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
HMGB1P3-201ENST00000502802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
HMGB1P3-201ENST00000502802 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P3-201ENST00000502802 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
HMGB1P3-201ENST00000502802 SPDYE5A6NIY4 337 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 RAD21O60216 631 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 POTEHQ6S545 545 aa9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P3-201ENST00000502802 RCCD1A6NED2 376 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
HMGB1P3-201ENST00000502802 RFC5P40937 340 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 EYA1Q99502 592 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 LHX6Q9UPM6 363 aa9.78□□□□□ -0.84
HMGB1P3-201ENST00000502802 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 COL9A1P20849 921 aa9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
HMGB1P3-201ENST00000502802 CD46P15529 392 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 PPP2R2DQ66LE6 453 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 BCL2L12Q9HB09 334 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 LIMD1Q9UGP4 676 aa9.76□□□□□ -0.85
HMGB1P3-201ENST00000502802 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P3-201ENST00000502802 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 PTPREP23469 700 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 NUDT18Q6ZVK8 323 aa9.74□□□□□ -0.85
HMGB1P3-201ENST00000502802 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms