RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 PKD2Q13563 968 aa23.79■■□□□ 1.4
CSF1R-202ENST00000502660 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
CSF1R-202ENST00000502660 MAGI2Q86UL8 1455 aa23.79■■□□□ 1.4
CSF1R-202ENST00000502660 ZMYM4Q5VZL5 1548 aa23.79■■□□□ 1.4
CSF1R-202ENST00000502660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.4
CSF1R-202ENST00000502660 ANKRD30BQ9BXX2 1392 aa23.77■■□□□ 1.4
CSF1R-202ENST00000502660 FRMPD1Q5SYB0 1578 aa23.77■■□□□ 1.4
CSF1R-202ENST00000502660 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
CSF1R-202ENST00000502660 KIF3BO15066 747 aa23.76■■□□□ 1.39
CSF1R-202ENST00000502660 IQGAP3Q86VI3 1631 aa23.75■■□□□ 1.39
CSF1R-202ENST00000502660 FOXD1Q16676 465 aa23.74■■□□□ 1.39
CSF1R-202ENST00000502660 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
CSF1R-202ENST00000502660 KANK1Q14678 1352 aa23.73■■□□□ 1.39
CSF1R-202ENST00000502660 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
CSF1R-202ENST00000502660 DIP2CQ9Y2E4 1556 aa23.71■■□□□ 1.39
CSF1R-202ENST00000502660 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
CSF1R-202ENST00000502660 BCORL1Q5H9F3 1711 aa23.68■■□□□ 1.38
CSF1R-202ENST00000502660 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
CSF1R-202ENST00000502660 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
CSF1R-202ENST00000502660 ATP10AO60312 1499 aa23.67■■□□□ 1.38
CSF1R-202ENST00000502660 VWDEQ8N2E2 1590 aa23.66■■□□□ 1.38
CSF1R-202ENST00000502660 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
CSF1R-202ENST00000502660 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
CSF1R-202ENST00000502660 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.37
CSF1R-202ENST00000502660 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
CSF1R-202ENST00000502660 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
CSF1R-202ENST00000502660 REREQ9P2R6 1566 aa23.62■■□□□ 1.37
CSF1R-202ENST00000502660 GGT6Q6P531 493 aa23.59■■□□□ 1.37
CSF1R-202ENST00000502660 TET3O43151 1660 aa23.59■■□□□ 1.37
CSF1R-202ENST00000502660 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.37
CSF1R-202ENST00000502660 AGLP35573 1532 aa23.57■■□□□ 1.36
CSF1R-202ENST00000502660 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
CSF1R-202ENST00000502660 ARHGEF40Q8TER5 1519 aa23.54■■□□□ 1.36
CSF1R-202ENST00000502660 WASHC2CQ9Y4E1 1318 aa23.53■■□□□ 1.36
CSF1R-202ENST00000502660 E9PCH4 1651 aa23.53■■□□□ 1.36
CSF1R-202ENST00000502660 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
CSF1R-202ENST00000502660 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
CSF1R-202ENST00000502660 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
CSF1R-202ENST00000502660 PTPRTO14522 1441 aa23.5■■□□□ 1.35
CSF1R-202ENST00000502660 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
CSF1R-202ENST00000502660 ABCC3O15438 1527 aa23.47■■□□□ 1.35
CSF1R-202ENST00000502660 CEP152O94986 1710 aa23.47■■□□□ 1.35
CSF1R-202ENST00000502660 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.35
CSF1R-202ENST00000502660 TRPM2O94759 1503 aa23.44■■□□□ 1.34
CSF1R-202ENST00000502660 SPHKAPQ2M3C7 1700 aa23.43■■□□□ 1.34
CSF1R-202ENST00000502660 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
CSF1R-202ENST00000502660 ARHGAP31Q2M1Z3 1444 aa23.43■■□□□ 1.34
CSF1R-202ENST00000502660 CAMSAP1Q5T5Y3 1602 aa23.39■■□□□ 1.34
CSF1R-202ENST00000502660 NPATQ14207 1427 aa23.39■■□□□ 1.33
CSF1R-202ENST00000502660 ADAMTSL3P82987 1691 aa23.37■■□□□ 1.33
CSF1R-202ENST00000502660 CNTLNQ9NXG0 1405 aa23.36■■□□□ 1.33
CSF1R-202ENST00000502660 SIGLEC1Q9BZZ2 1709 aa23.35■■□□□ 1.33
CSF1R-202ENST00000502660 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
CSF1R-202ENST00000502660 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
CSF1R-202ENST00000502660 NOS1P29475 1434 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 UHRF1BP1Q6BDS2 1440 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 SPATA31E1Q6ZUB1 1445 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 MLECQ14165 292 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 DCAF11Q8TEB1 546 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 ESF1Q9H501 851 aaKnown RBP23.32■■□□□ 1.32
CSF1R-202ENST00000502660 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 NEURL4Q96JN8 1562 aa23.32■■□□□ 1.32
CSF1R-202ENST00000502660 NBPF8Q3BBV2 869 aa23.31■■□□□ 1.32
CSF1R-202ENST00000502660 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
CSF1R-202ENST00000502660 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
CSF1R-202ENST00000502660 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
CSF1R-202ENST00000502660 SLC52A1Q9NWF4 448 aa23.27■■□□□ 1.31
CSF1R-202ENST00000502660 CFAP65Q6ZU64 1925 aaKnown RBP23.26■■□□□ 1.31
CSF1R-202ENST00000502660 CLTCQ00610 1675 aaKnown RBP23.26■■□□□ 1.31
CSF1R-202ENST00000502660 PTPRMP28827 1452 aa23.25■■□□□ 1.31
CSF1R-202ENST00000502660 KIF1BO60333 1816 aa23.25■■□□□ 1.31
CSF1R-202ENST00000502660 RIMS1Q86UR5 1692 aaKnown RBP23.24■■□□□ 1.31
CSF1R-202ENST00000502660 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
CSF1R-202ENST00000502660 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
CSF1R-202ENST00000502660 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
CSF1R-202ENST00000502660 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
CSF1R-202ENST00000502660 SYNMO15061 1565 aa23.2■■□□□ 1.3
CSF1R-202ENST00000502660 ERVK-7P63135 1459 aa23.2■■□□□ 1.3
CSF1R-202ENST00000502660 PIK3C2BO00750 1634 aa23.19■■□□□ 1.3
CSF1R-202ENST00000502660 RPGRIP1LQ68CZ1 1315 aa23.19■■□□□ 1.3
CSF1R-202ENST00000502660 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
CSF1R-202ENST00000502660 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSF1R-202ENST00000502660 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
CSF1R-202ENST00000502660 FER1L4A9Z1Z3 1794 aa23.18■■□□□ 1.3
CSF1R-202ENST00000502660 IDI1Q13907 227 aa23.17■■□□□ 1.3
CSF1R-202ENST00000502660 RALGAPBQ86X10 1494 aa23.17■■□□□ 1.3
CSF1R-202ENST00000502660 ADGRB3O60242 1522 aa23.16■■□□□ 1.3
CSF1R-202ENST00000502660 CHGAP10645 457 aaKnown RBP23.16■■□□□ 1.3
CSF1R-202ENST00000502660 MROH2AA6NES4 1674 aa23.15■■□□□ 1.3
CSF1R-202ENST00000502660 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
CSF1R-202ENST00000502660 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
CSF1R-202ENST00000502660 MYOM2P54296 1465 aa23.11■■□□□ 1.29
CSF1R-202ENST00000502660 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
CSF1R-202ENST00000502660 CARD11Q9BXL7 1154 aa23.09■■□□□ 1.29
CSF1R-202ENST00000502660 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
CSF1R-202ENST00000502660 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.28
CSF1R-202ENST00000502660 IFT172Q9UG01 1749 aa23.08■■□□□ 1.28
CSF1R-202ENST00000502660 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
CSF1R-202ENST00000502660 TNRQ92752 1358 aa23.05■■□□□ 1.28
CSF1R-202ENST00000502660 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms