RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 CEP170BQ9Y4F5 1589 aaPredicted RBP35.64■■■■□ 3.3
TNFRSF25-216ENST00000502588 FGD6Q6ZV73 1430 aa35.64■■■■□ 3.3
TNFRSF25-216ENST00000502588 EIF2AK4Q9P2K8 1649 aaKnown RBP35.64■■■■□ 3.3
TNFRSF25-216ENST00000502588 DNMT1P26358 1616 aaKnown RBP35.62■■■■□ 3.29
TNFRSF25-216ENST00000502588 ABCC5O15440 1437 aa35.62■■■■□ 3.29
TNFRSF25-216ENST00000502588 NCOA1Q15788 1441 aa35.62■■■■□ 3.29
TNFRSF25-216ENST00000502588 FAM135AQ9P2D6 1515 aa35.62■■■■□ 3.29
TNFRSF25-216ENST00000502588 MROH1Q8NDA8 1641 aa35.61■■■■□ 3.29
TNFRSF25-216ENST00000502588 TCOF1Q13428 1488 aaKnown RBP35.6■■■■□ 3.29
TNFRSF25-216ENST00000502588 FBXO41Q8TF61 875 aa35.58■■■■□ 3.29
TNFRSF25-216ENST00000502588 SHANK2Q9UPX8 1470 aa35.57■■■■□ 3.28
TNFRSF25-216ENST00000502588 PZPP20742 1482 aa35.56■■■■□ 3.28
TNFRSF25-216ENST00000502588 CEP152O94986 1710 aa35.56■■■■□ 3.28
TNFRSF25-216ENST00000502588 DAPK1P53355 1430 aa35.56■■■■□ 3.28
TNFRSF25-216ENST00000502588 DUOX2Q9NRD8 1548 aa35.55■■■■□ 3.28
TNFRSF25-216ENST00000502588 ZC3H13Q5T200 1668 aaKnown RBP35.54■■■■□ 3.28
TNFRSF25-216ENST00000502588 FBXO31Q5XUX0 539 aaPredicted RBP35.54■■■■□ 3.28
TNFRSF25-216ENST00000502588 WASHC2CQ9Y4E1 1318 aa35.54■■■■□ 3.28
TNFRSF25-216ENST00000502588 ABCC3O15438 1527 aa35.53■■■■□ 3.28
TNFRSF25-216ENST00000502588 PTPRTO14522 1441 aa35.53■■■■□ 3.28
TNFRSF25-216ENST00000502588 DMRT2Q9Y5R5 561 aa35.51■■■■□ 3.28
TNFRSF25-216ENST00000502588 KIF15Q9NS87 1388 aa35.49■■■■□ 3.27
TNFRSF25-216ENST00000502588 CERKQ8TCT0 537 aa35.48■■■■□ 3.27
TNFRSF25-216ENST00000502588 A2ML1A8K2U0 1454 aa35.48■■■■□ 3.27
TNFRSF25-216ENST00000502588 TNRQ92752 1358 aa35.47■■■■□ 3.27
TNFRSF25-216ENST00000502588 NCKAP5LQ9HCH0 1330 aa35.46■■■■□ 3.27
TNFRSF25-216ENST00000502588 CFAP65Q6ZU64 1925 aaKnown RBP35.44■■■■□ 3.26
TNFRSF25-216ENST00000502588 PLA2R1Q13018 1463 aa35.44■■■■□ 3.26
TNFRSF25-216ENST00000502588 RRP7BPQ9NSQ0 103 aa35.43■■■■□ 3.26
TNFRSF25-216ENST00000502588 PRDM15P57071 1507 aaPredicted RBP35.41■■■■□ 3.26
TNFRSF25-216ENST00000502588 DEPDC5O75140 1603 aa35.4■■■■□ 3.26
TNFRSF25-216ENST00000502588 ERBINQ96RT1 1412 aa35.4■■■■□ 3.26
TNFRSF25-216ENST00000502588 CHIC2Q9UKJ5 165 aa35.39■■■■□ 3.26
TNFRSF25-216ENST00000502588 POLR1AO95602 1720 aaPredicted RBP35.39■■■■□ 3.26
TNFRSF25-216ENST00000502588 LTBP4Q8N2S1 1624 aa35.39■■■■□ 3.26
TNFRSF25-216ENST00000502588 SPATA31D1Q6ZQQ2 1576 aa35.37■■■■□ 3.25
TNFRSF25-216ENST00000502588 ERVK-7P63135 1459 aa35.33■■■■□ 3.25
TNFRSF25-216ENST00000502588 NEURL4Q96JN8 1562 aa35.32■■■■□ 3.24
TNFRSF25-216ENST00000502588 FAM50AQ14320 339 aaKnown RBP35.31■■■■□ 3.24
TNFRSF25-216ENST00000502588 NLRP1Q9C000 1473 aa35.3■■■■□ 3.24
TNFRSF25-216ENST00000502588 ANKRD30AQ9BXX3 1397 aa35.3■■■■□ 3.24
TNFRSF25-216ENST00000502588 ADGRL2O95490 1459 aa35.29■■■■□ 3.24
TNFRSF25-216ENST00000502588 PKD2Q13563 968 aa35.28■■■■□ 3.24
TNFRSF25-216ENST00000502588 UGGT1Q9NYU2 1555 aa35.28■■■■□ 3.24
TNFRSF25-216ENST00000502588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.24■■■■□ 3.23
TNFRSF25-216ENST00000502588 PPARGC1BQ86YN6 1023 aaKnown RBP35.23■■■■□ 3.23
TNFRSF25-216ENST00000502588 ZNF335Q9H4Z2 1342 aaPredicted RBP35.23■■■■□ 3.23
TNFRSF25-216ENST00000502588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.23■■■■□ 3.23
TNFRSF25-216ENST00000502588 VWDEQ8N2E2 1590 aa35.22■■■■□ 3.23
TNFRSF25-216ENST00000502588 UBR1Q8IWV7 1749 aa35.2■■■■□ 3.23
TNFRSF25-216ENST00000502588 ARHGAP31Q2M1Z3 1444 aa35.17■■■■□ 3.22
TNFRSF25-216ENST00000502588 LMTK2Q8IWU2 1503 aa35.14■■■■□ 3.22
TNFRSF25-216ENST00000502588 THEMISQ8N1K5 641 aaPredicted RBP35.12■■■■□ 3.21
TNFRSF25-216ENST00000502588 KANK1Q14678 1352 aa35.12■■■■□ 3.21
TNFRSF25-216ENST00000502588 PIK3C2BO00750 1634 aa35.1■■■■□ 3.21
TNFRSF25-216ENST00000502588 ANKRD50Q9ULJ7 1429 aa35.09■■■■□ 3.21
TNFRSF25-216ENST00000502588 EFCAB6Q5THR3 1501 aa35.09■■■■□ 3.21
TNFRSF25-216ENST00000502588 IQSEC2Q5JU85 1478 aa35.09■■■■□ 3.21
TNFRSF25-216ENST00000502588 IQGAP1P46940 1657 aa35.08■■■■□ 3.21
TNFRSF25-216ENST00000502588 SYNMO15061 1565 aa35.06■■■■□ 3.2
TNFRSF25-216ENST00000502588 ANKLE2Q86XL3 938 aa35.06■■■■□ 3.2
TNFRSF25-216ENST00000502588 MED14O60244 1454 aa35.05■■■■□ 3.2
TNFRSF25-216ENST00000502588 NPHP4O75161 1426 aaPredicted RBP35.05■■■■□ 3.2
TNFRSF25-216ENST00000502588 UNC13BO14795 1591 aa35.03■■■■□ 3.2
TNFRSF25-216ENST00000502588 TET3O43151 1660 aa34.98■■■■□ 3.19
TNFRSF25-216ENST00000502588 STRCP1A6NGW2 1772 aa34.98■■■■□ 3.19
TNFRSF25-216ENST00000502588 ARHGAP23Q9P227 1491 aa34.97■■■■□ 3.19
TNFRSF25-216ENST00000502588 SLIT1O75093 1534 aa34.96■■■■□ 3.19
TNFRSF25-216ENST00000502588 GCC2Q8IWJ2 1684 aa34.96■■■■□ 3.19
TNFRSF25-216ENST00000502588 ITGAEP38570 1179 aa34.96■■■■□ 3.19
TNFRSF25-216ENST00000502588 ROCK1Q13464 1354 aa34.95■■■■□ 3.19
TNFRSF25-216ENST00000502588 NOS1P29475 1434 aa34.95■■■■□ 3.19
TNFRSF25-216ENST00000502588 KDM5AP29375 1690 aaKnown RBP34.94■■■■□ 3.18
TNFRSF25-216ENST00000502588 SCAF11Q99590 1463 aaKnown RBP34.92■■■■□ 3.18
TNFRSF25-216ENST00000502588 CPS1P31327 1500 aa34.91■■■■□ 3.18
TNFRSF25-216ENST00000502588 MYO5BQ9ULV0 1848 aa34.9■■■■□ 3.18
TNFRSF25-216ENST00000502588 E9PCH4 1651 aa34.89■■■■□ 3.18
TNFRSF25-216ENST00000502588 LTKP29376 864 aa34.89■■■■□ 3.18
TNFRSF25-216ENST00000502588 IDI1Q13907 227 aa34.88■■■■□ 3.17
TNFRSF25-216ENST00000502588 IQGAP3Q86VI3 1631 aa34.88■■■■□ 3.17
TNFRSF25-216ENST00000502588 ADGRB3O60242 1522 aa34.86■■■■□ 3.17
TNFRSF25-216ENST00000502588 RPRD2Q5VT52 1461 aaKnown RBP34.85■■■■□ 3.17
TNFRSF25-216ENST00000502588 TMEM2Q9UHN6 1383 aa34.83■■■■□ 3.17
TNFRSF25-216ENST00000502588 RRBP1Q9P2E9 1410 aaKnown RBP34.82■■■■□ 3.17
TNFRSF25-216ENST00000502588 UBAP1LF5GYI3 381 aa34.82■■■■□ 3.16
TNFRSF25-216ENST00000502588 TXNDC2Q86VQ3 553 aa34.82■■■■□ 3.16
TNFRSF25-216ENST00000502588 STAG3Q9UJ98 1225 aa34.79■■■■□ 3.16
TNFRSF25-216ENST00000502588 TMEM131LA2VDJ0 1609 aa34.73■■■■□ 3.15
TNFRSF25-216ENST00000502588 ALKQ9UM73 1620 aa34.73■■■■□ 3.15
TNFRSF25-216ENST00000502588 LRRC7Q96NW7 1537 aa34.73■■■■□ 3.15
TNFRSF25-216ENST00000502588 XIRP1Q702N8 1843 aaKnown RBP34.72■■■■□ 3.15
TNFRSF25-216ENST00000502588 EID1Q9Y6B2 187 aa34.72■■■■□ 3.15
TNFRSF25-216ENST00000502588 SLC52A1Q9NWF4 448 aa34.7■■■■□ 3.15
TNFRSF25-216ENST00000502588 NUP155O75694 1391 aa34.7■■■■□ 3.15
TNFRSF25-216ENST00000502588 ZFYVE9O95405 1425 aa34.64■■■■□ 3.14
TNFRSF25-216ENST00000502588 SPHKAPQ2M3C7 1700 aa34.62■■■■□ 3.13
TNFRSF25-216ENST00000502588 NAIPQ13075 1403 aa34.61■■■■□ 3.13
TNFRSF25-216ENST00000502588 PIP4K2BP78356 416 aa34.6■■■■□ 3.13
TNFRSF25-216ENST00000502588 SENP3Q9H4L4 574 aaPredicted RBP34.6■■■■□ 3.13
TNFRSF25-216ENST00000502588 SCAF1Q9H7N4 1312 aaKnown RBP34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms