RNA–Protein interactions for RNA: ENST00000502572.1

GDNF-205, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene GDNF, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-205ENST00000502572 TNRQ92752 1358 aa28.76■■■□□ 2.2
GDNF-205ENST00000502572 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
GDNF-205ENST00000502572 MED14O60244 1454 aa28.75■■■□□ 2.19
GDNF-205ENST00000502572 ANKLE2Q86XL3 938 aa28.75■■■□□ 2.19
GDNF-205ENST00000502572 DEPDC5O75140 1603 aa28.75■■■□□ 2.19
GDNF-205ENST00000502572 FAM135AQ9P2D6 1515 aa28.73■■■□□ 2.19
GDNF-205ENST00000502572 PZPP20742 1482 aa28.72■■■□□ 2.19
GDNF-205ENST00000502572 THEMISQ8N1K5 641 aaPredicted RBP28.7■■■□□ 2.18
GDNF-205ENST00000502572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.7■■■□□ 2.18
GDNF-205ENST00000502572 NPHP4O75161 1426 aaPredicted RBP28.69■■■□□ 2.18
GDNF-205ENST00000502572 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
GDNF-205ENST00000502572 CCNB3Q8WWL7 1395 aa28.69■■■□□ 2.18
GDNF-205ENST00000502572 RTEL1-TNFRSF6BF6WH68 1400 aa28.69■■■□□ 2.18
GDNF-205ENST00000502572 DHX29Q7Z478 1369 aaKnown RBP28.68■■■□□ 2.18
GDNF-205ENST00000502572 KDM5DQ9BY66 1539 aa28.68■■■□□ 2.18
GDNF-205ENST00000502572 IQGAP1P46940 1657 aa28.67■■■□□ 2.18
GDNF-205ENST00000502572 NLRP1Q9C000 1473 aa28.67■■■□□ 2.18
GDNF-205ENST00000502572 RNF17Q9BXT8 1623 aaKnown RBP28.67■■■□□ 2.18
GDNF-205ENST00000502572 STRCP1A6NGW2 1772 aa28.67■■■□□ 2.18
GDNF-205ENST00000502572 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
GDNF-205ENST00000502572 SYNMO15061 1565 aa28.65■■■□□ 2.18
GDNF-205ENST00000502572 MBD5Q9P267 1494 aa28.64■■■□□ 2.17
GDNF-205ENST00000502572 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.17
GDNF-205ENST00000502572 MIA2Q96PC5 1412 aa28.63■■■□□ 2.17
GDNF-205ENST00000502572 RGS17Q9UGC6 210 aaPredicted RBP28.61■■■□□ 2.17
GDNF-205ENST00000502572 KIF3BO15066 747 aa28.58■■■□□ 2.17
GDNF-205ENST00000502572 TIAM1Q13009 1591 aa28.56■■■□□ 2.16
GDNF-205ENST00000502572 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
GDNF-205ENST00000502572 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
GDNF-205ENST00000502572 SENP3Q9H4L4 574 aaPredicted RBP28.55■■■□□ 2.16
GDNF-205ENST00000502572 MTUS2Q5JR59 1369 aa28.52■■■□□ 2.16
GDNF-205ENST00000502572 ZC3H13Q5T200 1668 aaKnown RBP28.51■■■□□ 2.15
GDNF-205ENST00000502572 CCDC141Q6ZP82 1450 aa28.46■■■□□ 2.15
GDNF-205ENST00000502572 XIRP1Q702N8 1843 aaKnown RBP28.46■■■□□ 2.15
GDNF-205ENST00000502572 EHBP1L1Q8N3D4 1523 aa28.42■■■□□ 2.14
GDNF-205ENST00000502572 RSPH4AQ5TD94 716 aa28.41■■■□□ 2.14
GDNF-205ENST00000502572 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
GDNF-205ENST00000502572 UBR1Q8IWV7 1749 aa28.39■■■□□ 2.14
GDNF-205ENST00000502572 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
GDNF-205ENST00000502572 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
GDNF-205ENST00000502572 ERVK-7P63135 1459 aa28.36■■■□□ 2.13
GDNF-205ENST00000502572 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
GDNF-205ENST00000502572 ABCC3O15438 1527 aa28.36■■■□□ 2.13
GDNF-205ENST00000502572 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
GDNF-205ENST00000502572 ARHGEF5Q12774 1597 aa28.32■■■□□ 2.12
GDNF-205ENST00000502572 ARHGAP23Q9P227 1491 aa28.31■■■□□ 2.12
GDNF-205ENST00000502572 SLIT1O75093 1534 aa28.3■■■□□ 2.12
GDNF-205ENST00000502572 CFAP65Q6ZU64 1925 aaKnown RBP28.3■■■□□ 2.12
GDNF-205ENST00000502572 NCOA2Q15596 1464 aa28.29■■■□□ 2.12
GDNF-205ENST00000502572 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
GDNF-205ENST00000502572 EIF2AK4Q9P2K8 1649 aaKnown RBP28.27■■■□□ 2.12
GDNF-205ENST00000502572 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.12
GDNF-205ENST00000502572 LTKP29376 864 aa28.26■■■□□ 2.11
GDNF-205ENST00000502572 TSPY4P0CV99 314 aa28.25■■■□□ 2.11
GDNF-205ENST00000502572 TSPY10P0CW01 314 aa28.25■■■□□ 2.11
GDNF-205ENST00000502572 ROBO1Q9Y6N7 1651 aa28.25■■■□□ 2.11
GDNF-205ENST00000502572 TXNDC2Q86VQ3 553 aa28.24■■■□□ 2.11
GDNF-205ENST00000502572 MROH1Q8NDA8 1641 aa28.23■■■□□ 2.11
GDNF-205ENST00000502572 CEP152O94986 1710 aa28.23■■■□□ 2.11
GDNF-205ENST00000502572 MAST1Q9Y2H9 1570 aa28.2■■■□□ 2.11
GDNF-205ENST00000502572 EID1Q9Y6B2 187 aa28.18■■■□□ 2.1
GDNF-205ENST00000502572 LRRC9Q6ZRR7 1453 aa28.17■■■□□ 2.1
GDNF-205ENST00000502572 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
GDNF-205ENST00000502572 MAP3K1Q13233 1512 aa28.15■■■□□ 2.1
GDNF-205ENST00000502572 ARHGAP31Q2M1Z3 1444 aa28.13■■■□□ 2.09
GDNF-205ENST00000502572 KDM5AP29375 1690 aaKnown RBP28.11■■■□□ 2.09
GDNF-205ENST00000502572 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
GDNF-205ENST00000502572 PIK3C2BO00750 1634 aa28.1■■■□□ 2.09
GDNF-205ENST00000502572 PHLPP1O60346 1717 aa28.1■■■□□ 2.09
GDNF-205ENST00000502572 KCNA6P17658 529 aa28.1■■■□□ 2.09
GDNF-205ENST00000502572 JCADQ9P266 1359 aa28.07■■■□□ 2.08
GDNF-205ENST00000502572 PRDM15P57071 1507 aaPredicted RBP28.07■■■□□ 2.08
GDNF-205ENST00000502572 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
GDNF-205ENST00000502572 TET3O43151 1660 aa28.06■■■□□ 2.08
GDNF-205ENST00000502572 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
GDNF-205ENST00000502572 NKTRP30414 1462 aaKnown RBP28.04■■■□□ 2.08
GDNF-205ENST00000502572 UPF1Q92900 1129 aaKnown RBP eCLIP28.04■■■□□ 2.08
GDNF-205ENST00000502572 NWD1Q149M9 1564 aa28.03■■■□□ 2.08
GDNF-205ENST00000502572 EFCAB6Q5THR3 1501 aa28.02■■■□□ 2.08
GDNF-205ENST00000502572 MSH6P52701 1360 aa28■■■□□ 2.07
GDNF-205ENST00000502572 SLAIN2Q9P270 581 aa27.99■■■□□ 2.07
GDNF-205ENST00000502572 COL16A1Q07092 1604 aaPredicted RBP27.99■■■□□ 2.07
GDNF-205ENST00000502572 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
GDNF-205ENST00000502572 STAG3Q9UJ98 1225 aa27.98■■■□□ 2.07
GDNF-205ENST00000502572 SLC26A8Q96RN1 970 aa27.96■■■□□ 2.07
GDNF-205ENST00000502572 ZNF772Q68DY9 489 aaPredicted RBP27.95■■■□□ 2.06
GDNF-205ENST00000502572 SPATA31A6Q5VVP1 1343 aa27.93■■■□□ 2.06
GDNF-205ENST00000502572 FGD6Q6ZV73 1430 aa27.93■■■□□ 2.06
GDNF-205ENST00000502572 ERBINQ96RT1 1412 aa27.92■■■□□ 2.06
GDNF-205ENST00000502572 LRP6O75581 1613 aa27.92■■■□□ 2.06
GDNF-205ENST00000502572 IDI1Q13907 227 aa27.91■■■□□ 2.06
GDNF-205ENST00000502572 CHD2O14647 1828 aaKnown RBP27.9■■■□□ 2.06
GDNF-205ENST00000502572 SHPRHQ149N8 1683 aa27.88■■■□□ 2.05
GDNF-205ENST00000502572 MYOM3Q5VTT5 1437 aa27.88■■■□□ 2.05
GDNF-205ENST00000502572 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
GDNF-205ENST00000502572 KIF15Q9NS87 1388 aa27.87■■■□□ 2.05
GDNF-205ENST00000502572 SRCAPQ6ZRS2 3230 aa27.87■■■□□ 2.05
GDNF-205ENST00000502572 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
GDNF-205ENST00000502572 ADGRB3O60242 1522 aa27.86■■■□□ 2.05
GDNF-205ENST00000502572 LMTK2Q8IWU2 1503 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms