RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 MYO3AQ8NEV4 1616 aa30.92■■■□□ 2.54
SFXN1-203ENST00000502393 KDM5DQ9BY66 1539 aa30.92■■■□□ 2.54
SFXN1-203ENST00000502393 WASHC2CQ9Y4E1 1318 aa30.92■■■□□ 2.54
SFXN1-203ENST00000502393 ZNF142P52746 1687 aaPredicted RBP30.9■■■□□ 2.54
SFXN1-203ENST00000502393 CEP170BQ9Y4F5 1589 aaPredicted RBP30.88■■■□□ 2.53
SFXN1-203ENST00000502393 PZPP20742 1482 aa30.85■■■□□ 2.53
SFXN1-203ENST00000502393 PLA2R1Q13018 1463 aa30.83■■■□□ 2.53
SFXN1-203ENST00000502393 FBXO31Q5XUX0 539 aaPredicted RBP30.82■■■□□ 2.52
SFXN1-203ENST00000502393 RNF17Q9BXT8 1623 aaKnown RBP30.82■■■□□ 2.52
SFXN1-203ENST00000502393 PTPN23Q9H3S7 1636 aa30.82■■■□□ 2.52
SFXN1-203ENST00000502393 EIF2AK4Q9P2K8 1649 aaKnown RBP30.81■■■□□ 2.52
SFXN1-203ENST00000502393 NCKAP5LQ9HCH0 1330 aa30.81■■■□□ 2.52
SFXN1-203ENST00000502393 PKD2Q13563 968 aa30.81■■■□□ 2.52
SFXN1-203ENST00000502393 A2ML1A8K2U0 1454 aa30.81■■■□□ 2.52
SFXN1-203ENST00000502393 TNRQ92752 1358 aa30.8■■■□□ 2.52
SFXN1-203ENST00000502393 SHANK2Q9UPX8 1470 aa30.79■■■□□ 2.52
SFXN1-203ENST00000502393 DUOX2Q9NRD8 1548 aa30.78■■■□□ 2.52
SFXN1-203ENST00000502393 ABCC5O15440 1437 aa30.78■■■□□ 2.52
SFXN1-203ENST00000502393 FGD6Q6ZV73 1430 aa30.78■■■□□ 2.52
SFXN1-203ENST00000502393 TCOF1Q13428 1488 aaKnown RBP30.76■■■□□ 2.52
SFXN1-203ENST00000502393 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.51
SFXN1-203ENST00000502393 CROCC2H7BZ55 1655 aa30.74■■■□□ 2.51
SFXN1-203ENST00000502393 ZC3H13Q5T200 1668 aaKnown RBP30.74■■■□□ 2.51
SFXN1-203ENST00000502393 ABCC3O15438 1527 aa30.73■■■□□ 2.51
SFXN1-203ENST00000502393 KIF15Q9NS87 1388 aa30.73■■■□□ 2.51
SFXN1-203ENST00000502393 DAPK1P53355 1430 aa30.73■■■□□ 2.51
SFXN1-203ENST00000502393 LTBP4Q8N2S1 1624 aa30.72■■■□□ 2.51
SFXN1-203ENST00000502393 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.51
SFXN1-203ENST00000502393 ERBINQ96RT1 1412 aa30.69■■■□□ 2.5
SFXN1-203ENST00000502393 NLRP1Q9C000 1473 aa30.69■■■□□ 2.5
SFXN1-203ENST00000502393 MROH1Q8NDA8 1641 aa30.69■■■□□ 2.5
SFXN1-203ENST00000502393 THEMISQ8N1K5 641 aaPredicted RBP30.64■■■□□ 2.5
SFXN1-203ENST00000502393 IQSEC2Q5JU85 1478 aa30.63■■■□□ 2.49
SFXN1-203ENST00000502393 SPATA31D1Q6ZQQ2 1576 aa30.62■■■□□ 2.49
SFXN1-203ENST00000502393 ANKRD30AQ9BXX3 1397 aa30.62■■■□□ 2.49
SFXN1-203ENST00000502393 ZNF335Q9H4Z2 1342 aaPredicted RBP30.61■■■□□ 2.49
SFXN1-203ENST00000502393 PRDM15P57071 1507 aaPredicted RBP30.61■■■□□ 2.49
SFXN1-203ENST00000502393 UGGT1Q9NYU2 1555 aa30.61■■■□□ 2.49
SFXN1-203ENST00000502393 CHIC2Q9UKJ5 165 aa30.6■■■□□ 2.49
SFXN1-203ENST00000502393 ERVK-7P63135 1459 aa30.59■■■□□ 2.49
SFXN1-203ENST00000502393 CEP152O94986 1710 aa30.59■■■□□ 2.49
SFXN1-203ENST00000502393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.58■■■□□ 2.49
SFXN1-203ENST00000502393 ANKLE2Q86XL3 938 aa30.58■■■□□ 2.49
SFXN1-203ENST00000502393 POLR1AO95602 1720 aaPredicted RBP30.57■■■□□ 2.48
SFXN1-203ENST00000502393 ARHGAP31Q2M1Z3 1444 aa30.55■■■□□ 2.48
SFXN1-203ENST00000502393 DEPDC5O75140 1603 aa30.55■■■□□ 2.48
SFXN1-203ENST00000502393 FAM50AQ14320 339 aaKnown RBP30.54■■■□□ 2.48
SFXN1-203ENST00000502393 NEURL4Q96JN8 1562 aa30.54■■■□□ 2.48
SFXN1-203ENST00000502393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.53■■■□□ 2.488e-7■■□□□ 11.6
SFXN1-203ENST00000502393 KANK1Q14678 1352 aa30.53■■■□□ 2.48
SFXN1-203ENST00000502393 ADGRL2O95490 1459 aa30.51■■■□□ 2.48
SFXN1-203ENST00000502393 MED14O60244 1454 aa30.48■■■□□ 2.47
SFXN1-203ENST00000502393 CFAP65Q6ZU64 1925 aaKnown RBP30.45■■■□□ 2.46
SFXN1-203ENST00000502393 LMTK2Q8IWU2 1503 aa30.44■■■□□ 2.46
SFXN1-203ENST00000502393 NPHP4O75161 1426 aaPredicted RBP30.44■■■□□ 2.46
SFXN1-203ENST00000502393 VWDEQ8N2E2 1590 aa30.43■■■□□ 2.46
SFXN1-203ENST00000502393 UBR1Q8IWV7 1749 aa30.41■■■□□ 2.46
SFXN1-203ENST00000502393 CPS1P31327 1500 aa30.39■■■□□ 2.46
SFXN1-203ENST00000502393 ANKRD50Q9ULJ7 1429 aa30.39■■■□□ 2.45
SFXN1-203ENST00000502393 UBAP1LF5GYI3 381 aa30.37■■■□□ 2.45
SFXN1-203ENST00000502393 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
SFXN1-203ENST00000502393 SLIT1O75093 1534 aa30.32■■■□□ 2.44
SFXN1-203ENST00000502393 EFCAB6Q5THR3 1501 aa30.32■■■□□ 2.44
SFXN1-203ENST00000502393 ARHGAP23Q9P227 1491 aa30.32■■■□□ 2.44
SFXN1-203ENST00000502393 SCAF11Q99590 1463 aaKnown RBP30.31■■■□□ 2.44
SFXN1-203ENST00000502393 PIK3C2BO00750 1634 aa30.29■■■□□ 2.44
SFXN1-203ENST00000502393 ROCK1Q13464 1354 aa30.29■■■□□ 2.44
SFXN1-203ENST00000502393 TXNDC2Q86VQ3 553 aa30.29■■■□□ 2.44
SFXN1-203ENST00000502393 STAG3Q9UJ98 1225 aa30.29■■■□□ 2.44
SFXN1-203ENST00000502393 LTKP29376 864 aa30.28■■■□□ 2.44
SFXN1-203ENST00000502393 IDI1Q13907 227 aa30.28■■■□□ 2.44
SFXN1-203ENST00000502393 EID1Q9Y6B2 187 aa30.28■■■□□ 2.44
SFXN1-203ENST00000502393 NOS1P29475 1434 aa30.28■■■□□ 2.44
SFXN1-203ENST00000502393 KDM5AP29375 1690 aaKnown RBP30.27■■■□□ 2.44
SFXN1-203ENST00000502393 TMEM2Q9UHN6 1383 aa30.26■■■□□ 2.43
SFXN1-203ENST00000502393 RPRD2Q5VT52 1461 aaKnown RBP30.25■■■□□ 2.43
SFXN1-203ENST00000502393 SYNMO15061 1565 aa30.24■■■□□ 2.43
SFXN1-203ENST00000502393 PPARGC1BQ86YN6 1023 aaKnown RBP30.24■■■□□ 2.43
SFXN1-203ENST00000502393 SLC52A1Q9NWF4 448 aa30.24■■■□□ 2.43
SFXN1-203ENST00000502393 TOM1O60784 492 aa30.22■■■□□ 2.43
SFXN1-203ENST00000502393 TET3O43151 1660 aa30.2■■■□□ 2.42
SFXN1-203ENST00000502393 UNC13BO14795 1591 aa30.2■■■□□ 2.42
SFXN1-203ENST00000502393 STRCP1A6NGW2 1772 aa30.16■■■□□ 2.42
SFXN1-203ENST00000502393 ITGAEP38570 1179 aa30.16■■■□□ 2.42
SFXN1-203ENST00000502393 ADGRB3O60242 1522 aa30.15■■■□□ 2.42
SFXN1-203ENST00000502393 LRRC7Q96NW7 1537 aa30.14■■■□□ 2.42
SFXN1-203ENST00000502393 GCC2Q8IWJ2 1684 aa30.14■■■□□ 2.41
SFXN1-203ENST00000502393 DISP3Q9P2K9 1392 aa30.13■■■□□ 2.41
SFXN1-203ENST00000502393 PIP4K2BP78356 416 aa30.12■■■□□ 2.41
SFXN1-203ENST00000502393 SCAF1Q9H7N4 1312 aaKnown RBP30.11■■■□□ 2.41
SFXN1-203ENST00000502393 IQGAP3Q86VI3 1631 aa30.08■■■□□ 2.41
SFXN1-203ENST00000502393 NUP155O75694 1391 aa30.06■■■□□ 2.4
SFXN1-203ENST00000502393 RRBP1Q9P2E9 1410 aaKnown RBP30.05■■■□□ 2.4
SFXN1-203ENST00000502393 E9PCH4 1651 aa30.04■■■□□ 2.4
SFXN1-203ENST00000502393 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
SFXN1-203ENST00000502393 HSPA1LP34931 641 aa30.02■■■□□ 2.4
SFXN1-203ENST00000502393 HDGFP51858 240 aaKnown RBP30.02■■■□□ 2.4
SFXN1-203ENST00000502393 SLC26A8Q96RN1 970 aa30.01■■■□□ 2.39
SFXN1-203ENST00000502393 TMEM131LA2VDJ0 1609 aa30■■■□□ 2.39
SFXN1-203ENST00000502393 ZFYVE9O95405 1425 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms