RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
NEAT1-201ENST00000499732 RICTORQ6R327 1708 aa20.5■□□□□ 0.87
NEAT1-201ENST00000499732 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
NEAT1-201ENST00000499732 PTPRMP28827 1452 aa20.48■□□□□ 0.87
NEAT1-201ENST00000499732 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
NEAT1-201ENST00000499732 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
NEAT1-201ENST00000499732 KDM5DQ9BY66 1539 aa20.46■□□□□ 0.87
NEAT1-201ENST00000499732 KIDINS220Q9ULH0 1771 aa20.45■□□□□ 0.87
NEAT1-201ENST00000499732 ADAMTSL3P82987 1691 aa20.45■□□□□ 0.86
NEAT1-201ENST00000499732 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
NEAT1-201ENST00000499732 ZMYM4Q5VZL5 1548 aa20.44■□□□□ 0.86
NEAT1-201ENST00000499732 PPP1R15AO75807 674 aaPredicted RBP20.43■□□□□ 0.86
NEAT1-201ENST00000499732 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
NEAT1-201ENST00000499732 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
NEAT1-201ENST00000499732 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
NEAT1-201ENST00000499732 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
NEAT1-201ENST00000499732 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
NEAT1-201ENST00000499732 FOXD1Q16676 465 aa20.42■□□□□ 0.86
NEAT1-201ENST00000499732 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
NEAT1-201ENST00000499732 CCER2I3L3R5 266 aa20.41■□□□□ 0.86
NEAT1-201ENST00000499732 ABCA6Q8N139 1617 aa20.39■□□□□ 0.85
NEAT1-201ENST00000499732 UNC13BO14795 1591 aa20.39■□□□□ 0.85
NEAT1-201ENST00000499732 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
NEAT1-201ENST00000499732 ILDR1Q86SU0 546 aaPredicted RBP20.39■□□□□ 0.85
NEAT1-201ENST00000499732 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
NEAT1-201ENST00000499732 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
NEAT1-201ENST00000499732 NUP155O75694 1391 aa20.37■□□□□ 0.85
NEAT1-201ENST00000499732 YEATS2Q9ULM3 1422 aa20.37■□□□□ 0.85
NEAT1-201ENST00000499732 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
NEAT1-201ENST00000499732 DIP2CQ9Y2E4 1556 aa20.36■□□□□ 0.85
NEAT1-201ENST00000499732 DHX29Q7Z478 1369 aaKnown RBP20.35■□□□□ 0.85
NEAT1-201ENST00000499732 ATP10AO60312 1499 aa20.33■□□□□ 0.85
NEAT1-201ENST00000499732 A2MP01023 1474 aa20.33■□□□□ 0.85
NEAT1-201ENST00000499732 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.85
NEAT1-201ENST00000499732 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.84
NEAT1-201ENST00000499732 PKD2Q13563 968 aa20.32■□□□□ 0.84
NEAT1-201ENST00000499732 IQGAP3Q86VI3 1631 aa20.3■□□□□ 0.84
NEAT1-201ENST00000499732 ANP32CO43423 234 aa20.3■□□□□ 0.84
NEAT1-201ENST00000499732 MLECQ14165 292 aa20.3■□□□□ 0.84
NEAT1-201ENST00000499732 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
NEAT1-201ENST00000499732 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
NEAT1-201ENST00000499732 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
NEAT1-201ENST00000499732 L3MBTL2Q969R5 705 aa20.25■□□□□ 0.83
NEAT1-201ENST00000499732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
NEAT1-201ENST00000499732 KIF3BO15066 747 aa20.25■□□□□ 0.83
NEAT1-201ENST00000499732 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
NEAT1-201ENST00000499732 RNF17Q9BXT8 1623 aaKnown RBP20.24■□□□□ 0.83
NEAT1-201ENST00000499732 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
NEAT1-201ENST00000499732 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
NEAT1-201ENST00000499732 FKBP8Q14318 412 aa20.23■□□□□ 0.83
NEAT1-201ENST00000499732 NEFLP07196 543 aa20.23■□□□□ 0.83
NEAT1-201ENST00000499732 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
NEAT1-201ENST00000499732 KANK1Q14678 1352 aa20.21■□□□□ 0.83
NEAT1-201ENST00000499732 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
NEAT1-201ENST00000499732 SIGLEC1Q9BZZ2 1709 aa20.17■□□□□ 0.82
NEAT1-201ENST00000499732 FBXO41Q8TF61 875 aa20.17■□□□□ 0.82
NEAT1-201ENST00000499732 ESF1Q9H501 851 aaKnown RBP20.17■□□□□ 0.82
NEAT1-201ENST00000499732 FER1L4A9Z1Z3 1794 aa20.16■□□□□ 0.82
NEAT1-201ENST00000499732 HSPA2P54652 639 aa20.16■□□□□ 0.82
NEAT1-201ENST00000499732 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
NEAT1-201ENST00000499732 TET3O43151 1660 aa20.15■□□□□ 0.82
NEAT1-201ENST00000499732 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
NEAT1-201ENST00000499732 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
NEAT1-201ENST00000499732 AGLP35573 1532 aa20.14■□□□□ 0.81
NEAT1-201ENST00000499732 BCANQ96GW7 911 aa20.13■□□□□ 0.81
NEAT1-201ENST00000499732 CEP152O94986 1710 aa20.13■□□□□ 0.81
NEAT1-201ENST00000499732 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
NEAT1-201ENST00000499732 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
NEAT1-201ENST00000499732 E9PCH4 1651 aa20.12■□□□□ 0.81
NEAT1-201ENST00000499732 GGT6Q6P531 493 aa20.11■□□□□ 0.81
NEAT1-201ENST00000499732 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
NEAT1-201ENST00000499732 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
NEAT1-201ENST00000499732 ABCC3O15438 1527 aa20.09■□□□□ 0.81
NEAT1-201ENST00000499732 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
NEAT1-201ENST00000499732 ZC3H13Q5T200 1668 aaKnown RBP20.08■□□□□ 0.81
NEAT1-201ENST00000499732 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
NEAT1-201ENST00000499732 CNTLNQ9NXG0 1405 aa20.07■□□□□ 0.8
NEAT1-201ENST00000499732 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
NEAT1-201ENST00000499732 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
NEAT1-201ENST00000499732 POLR1AO95602 1720 aaPredicted RBP20.05■□□□□ 0.8
NEAT1-201ENST00000499732 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
NEAT1-201ENST00000499732 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
NEAT1-201ENST00000499732 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
NEAT1-201ENST00000499732 PTPRTO14522 1441 aa20.04■□□□□ 0.8
NEAT1-201ENST00000499732 PREX1Q8TCU6 1659 aa20.03■□□□□ 0.8
NEAT1-201ENST00000499732 TRPM2O94759 1503 aa20.02■□□□□ 0.8
NEAT1-201ENST00000499732 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
NEAT1-201ENST00000499732 EIF4G2P78344 907 aaKnown RBP eCLIP20.01■□□□□ 0.79
NEAT1-201ENST00000499732 RALGAPBQ86X10 1494 aa20■□□□□ 0.79
NEAT1-201ENST00000499732 ARHGAP31Q2M1Z3 1444 aa19.98■□□□□ 0.79
NEAT1-201ENST00000499732 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
NEAT1-201ENST00000499732 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
NEAT1-201ENST00000499732 CLTCQ00610 1675 aaKnown RBP19.98■□□□□ 0.79
NEAT1-201ENST00000499732 NPATQ14207 1427 aa19.98■□□□□ 0.79
NEAT1-201ENST00000499732 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
NEAT1-201ENST00000499732 CERKQ8TCT0 537 aa19.97■□□□□ 0.79
NEAT1-201ENST00000499732 SETD1BQ9UPS6 1966 aaKnown RBP19.97■□□□□ 0.79
NEAT1-201ENST00000499732 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
NEAT1-201ENST00000499732 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
NEAT1-201ENST00000499732 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms