RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 KIF3BO15066 747 aa23.59■■□□□ 1.37
SEC61A1-207ENST00000498837 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
SEC61A1-207ENST00000498837 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
SEC61A1-207ENST00000498837 CCDC141Q6ZP82 1450 aa23.56■■□□□ 1.36
SEC61A1-207ENST00000498837 NEURL4Q96JN8 1562 aa23.56■■□□□ 1.36
SEC61A1-207ENST00000498837 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
SEC61A1-207ENST00000498837 TNRQ92752 1358 aa23.55■■□□□ 1.36
SEC61A1-207ENST00000498837 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
SEC61A1-207ENST00000498837 PZPP20742 1482 aa23.54■■□□□ 1.36
SEC61A1-207ENST00000498837 CFAP65Q6ZU64 1925 aaKnown RBP23.51■■□□□ 1.35
SEC61A1-207ENST00000498837 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
SEC61A1-207ENST00000498837 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
SEC61A1-207ENST00000498837 RSPH4AQ5TD94 716 aa23.49■■□□□ 1.35
SEC61A1-207ENST00000498837 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
SEC61A1-207ENST00000498837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.47■■□□□ 1.35
SEC61A1-207ENST00000498837 SHANK2Q9UPX8 1470 aa23.47■■□□□ 1.35
SEC61A1-207ENST00000498837 MIA2Q96PC5 1412 aa23.46■■□□□ 1.35
SEC61A1-207ENST00000498837 CPS1P31327 1500 aa23.45■■□□□ 1.34
SEC61A1-207ENST00000498837 UGGT1Q9NYU2 1555 aa23.44■■□□□ 1.34
SEC61A1-207ENST00000498837 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
SEC61A1-207ENST00000498837 ANKLE2Q86XL3 938 aa23.44■■□□□ 1.34
SEC61A1-207ENST00000498837 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
SEC61A1-207ENST00000498837 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
SEC61A1-207ENST00000498837 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
SEC61A1-207ENST00000498837 THEMISQ8N1K5 641 aaPredicted RBP23.43■■□□□ 1.34
SEC61A1-207ENST00000498837 VWDEQ8N2E2 1590 aa23.43■■□□□ 1.34
SEC61A1-207ENST00000498837 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
SEC61A1-207ENST00000498837 HSPA1LP34931 641 aa23.42■■□□□ 1.34
SEC61A1-207ENST00000498837 NLRP1Q9C000 1473 aa23.42■■□□□ 1.34
SEC61A1-207ENST00000498837 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
SEC61A1-207ENST00000498837 TOM1O60784 492 aa23.4■■□□□ 1.34
SEC61A1-207ENST00000498837 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
SEC61A1-207ENST00000498837 IQGAP1P46940 1657 aa23.39■■□□□ 1.34
SEC61A1-207ENST00000498837 CEP152O94986 1710 aa23.39■■□□□ 1.33
SEC61A1-207ENST00000498837 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
SEC61A1-207ENST00000498837 MED14O60244 1454 aa23.38■■□□□ 1.33
SEC61A1-207ENST00000498837 NPHP4O75161 1426 aaPredicted RBP23.38■■□□□ 1.33
SEC61A1-207ENST00000498837 MAST1Q9Y2H9 1570 aa23.38■■□□□ 1.33
SEC61A1-207ENST00000498837 ABCC3O15438 1527 aa23.37■■□□□ 1.33
SEC61A1-207ENST00000498837 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
SEC61A1-207ENST00000498837 MED1Q15648 1581 aaPredicted RBP23.36■■□□□ 1.33
SEC61A1-207ENST00000498837 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
SEC61A1-207ENST00000498837 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
SEC61A1-207ENST00000498837 MROH1Q8NDA8 1641 aa23.34■■□□□ 1.33
SEC61A1-207ENST00000498837 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
SEC61A1-207ENST00000498837 ERVK-7P63135 1459 aa23.31■■□□□ 1.32
SEC61A1-207ENST00000498837 VPS8Q8N3P4 1428 aa23.31■■□□□ 1.32
SEC61A1-207ENST00000498837 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
SEC61A1-207ENST00000498837 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
SEC61A1-207ENST00000498837 LRRC7Q96NW7 1537 aa23.26■■□□□ 1.31
SEC61A1-207ENST00000498837 MYOM3Q5VTT5 1437 aa23.25■■□□□ 1.31
SEC61A1-207ENST00000498837 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
SEC61A1-207ENST00000498837 SYNMO15061 1565 aa23.23■■□□□ 1.31
SEC61A1-207ENST00000498837 XIRP1Q702N8 1843 aaKnown RBP23.23■■□□□ 1.31
SEC61A1-207ENST00000498837 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
SEC61A1-207ENST00000498837 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
SEC61A1-207ENST00000498837 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
SEC61A1-207ENST00000498837 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
SEC61A1-207ENST00000498837 LTKP29376 864 aa23.19■■□□□ 1.3
SEC61A1-207ENST00000498837 SLIT1O75093 1534 aa23.17■■□□□ 1.3
SEC61A1-207ENST00000498837 PRDM15P57071 1507 aaPredicted RBP23.17■■□□□ 1.3
SEC61A1-207ENST00000498837 ARHGAP23Q9P227 1491 aa23.17■■□□□ 1.3
SEC61A1-207ENST00000498837 PIK3C2BO00750 1634 aa23.16■■□□□ 1.3
SEC61A1-207ENST00000498837 KIF15Q9NS87 1388 aa23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 ARHGAP31Q2M1Z3 1444 aa23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 PTPN23Q9H3S7 1636 aa23.15■■□□□ 1.3
SEC61A1-207ENST00000498837 ABCC5O15440 1437 aa23.14■■□□□ 1.29
SEC61A1-207ENST00000498837 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
SEC61A1-207ENST00000498837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.12■■□□□ 1.29
SEC61A1-207ENST00000498837 EID1Q9Y6B2 187 aa23.08■■□□□ 1.29
SEC61A1-207ENST00000498837 DAPK1P53355 1430 aa23.08■■□□□ 1.28
SEC61A1-207ENST00000498837 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
SEC61A1-207ENST00000498837 TMEM2Q9UHN6 1383 aa23.05■■□□□ 1.28
SEC61A1-207ENST00000498837 STAG3Q9UJ98 1225 aa23.04■■□□□ 1.28
SEC61A1-207ENST00000498837 KANK1Q14678 1352 aa23.03■■□□□ 1.28
SEC61A1-207ENST00000498837 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
SEC61A1-207ENST00000498837 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
SEC61A1-207ENST00000498837 IDI1Q13907 227 aa23.02■■□□□ 1.28
SEC61A1-207ENST00000498837 FGD6Q6ZV73 1430 aa23.01■■□□□ 1.27
SEC61A1-207ENST00000498837 LMTK2Q8IWU2 1503 aa23.01■■□□□ 1.27
SEC61A1-207ENST00000498837 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
SEC61A1-207ENST00000498837 TET3O43151 1660 aa23■■□□□ 1.27
SEC61A1-207ENST00000498837 APLP2Q06481 763 aa22.99■■□□□ 1.27
SEC61A1-207ENST00000498837 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
SEC61A1-207ENST00000498837 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
SEC61A1-207ENST00000498837 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
SEC61A1-207ENST00000498837 TMEM94Q12767 1356 aa22.97■■□□□ 1.27
SEC61A1-207ENST00000498837 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
SEC61A1-207ENST00000498837 FAM135BQ49AJ0 1406 aa22.96■■□□□ 1.27
SEC61A1-207ENST00000498837 KCNA6P17658 529 aa22.95■■□□□ 1.26
SEC61A1-207ENST00000498837 NOS1P29475 1434 aa22.95■■□□□ 1.26
SEC61A1-207ENST00000498837 RBM33Q96EV2 1170 aaKnown RBP22.95■■□□□ 1.26
SEC61A1-207ENST00000498837 ADGRB3O60242 1522 aa22.94■■□□□ 1.26
SEC61A1-207ENST00000498837 PROSER2Q86WR7 435 aaPredicted RBP22.94■■□□□ 1.26
SEC61A1-207ENST00000498837 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
SEC61A1-207ENST00000498837 NWD1Q149M9 1564 aa22.9■■□□□ 1.26
SEC61A1-207ENST00000498837 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms