RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 MYOM3Q5VTT5 1437 aa6.1□□□□□ -1.43
TNC-208ENST00000498724 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
TNC-208ENST00000498724 FAM212AQ96EL1 285 aa6.1□□□□□ -1.43
TNC-208ENST00000498724 TAOK2Q9UL54 1235 aa6.1□□□□□ -1.43
TNC-208ENST00000498724 KIAA0556O60303 1618 aa6.1□□□□□ -1.43
TNC-208ENST00000498724 MAP3K4Q9Y6R4 1608 aa6.1□□□□□ -1.43
TNC-208ENST00000498724 WDR7Q9Y4E6 1490 aa6.09□□□□□ -1.43
TNC-208ENST00000498724 PTPRKQ15262 1439 aa6.09□□□□□ -1.43
TNC-208ENST00000498724 SUPT6HQ7KZ85 1726 aaKnown RBP6.09□□□□□ -1.43
TNC-208ENST00000498724 PAK3O75914 559 aaPredicted RBP6.09□□□□□ -1.43
TNC-208ENST00000498724 EIF4G2P78344 907 aaKnown RBP eCLIP6.09□□□□□ -1.43
TNC-208ENST00000498724 HECW1Q76N89 1606 aa6.09□□□□□ -1.43
TNC-208ENST00000498724 GCC2Q8IWJ2 1684 aa6.08□□□□□ -1.44
TNC-208ENST00000498724 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
TNC-208ENST00000498724 RAPGEF3O95398 923 aa6.08□□□□□ -1.44
TNC-208ENST00000498724 CREBZFQ9NS37 354 aa6.08□□□□□ -1.44
TNC-208ENST00000498724 CIZ1Q9ULV3 898 aaPredicted RBP6.08□□□□□ -1.44
TNC-208ENST00000498724 SAMD9Q5K651 1589 aa6.07□□□□□ -1.44
TNC-208ENST00000498724 TCOF1Q13428 1488 aaKnown RBP6.07□□□□□ -1.44
TNC-208ENST00000498724 AKNAQ7Z591 1439 aa6.07□□□□□ -1.44
TNC-208ENST00000498724 CCDC7Q96M83 1385 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 ARID4BQ4LE39 1312 aaPredicted RBP6.06□□□□□ -1.44
TNC-208ENST00000498724 ZBED9Q6R2W3 1325 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 PRKAR2AP13861 404 aaKnown RBP6.06□□□□□ -1.44
TNC-208ENST00000498724 MRS2Q9HD23 443 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 ATP10BO94823 1461 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 NCOA1Q15788 1441 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 ABCA8O94911 1581 aa6.06□□□□□ -1.44
TNC-208ENST00000498724 MAGI3Q5TCQ9 1506 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 PLEKHD1A6NEE1 506 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 FXR2P51116 673 aaKnown RBP eCLIP6.05□□□□□ -1.44
TNC-208ENST00000498724 DCAF8Q5TAQ9 597 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 FAM9BQ8IZU0 186 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 RRP7BPQ9NSQ0 103 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 NOP58Q9Y2X3 529 aaKnown RBP6.05□□□□□ -1.44
TNC-208ENST00000498724 HECW2Q9P2P5 1572 aa6.05□□□□□ -1.44
TNC-208ENST00000498724 ECM2O94769 699 aaPredicted RBP6.04□□□□□ -1.44
TNC-208ENST00000498724 DEKP35659 375 aaKnown RBP6.04□□□□□ -1.44
TNC-208ENST00000498724 B4GALNT3Q6L9W6 998 aa6.04□□□□□ -1.44
TNC-208ENST00000498724 PRKRIP1Q9H875 184 aaPredicted RBP6.04□□□□□ -1.44
TNC-208ENST00000498724 LRRIQ1Q96JM4 1722 aa6.04□□□□□ -1.44
TNC-208ENST00000498724 SMG6Q86US8 1419 aaKnown RBP6.03□□□□□ -1.44
TNC-208ENST00000498724 CCDC184Q52MB2 194 aa6.03□□□□□ -1.44
TNC-208ENST00000498724 MPHOSPH9Q99550 1183 aa6.03□□□□□ -1.44
TNC-208ENST00000498724 FARP1Q9Y4F1 1045 aaPredicted RBP6.03□□□□□ -1.44
TNC-208ENST00000498724 MIA2Q96PC5 1412 aa6.02□□□□□ -1.45
TNC-208ENST00000498724 L3MBTL2Q969R5 705 aa6.02□□□□□ -1.45
TNC-208ENST00000498724 CHIC2Q9UKJ5 165 aa6.02□□□□□ -1.45
TNC-208ENST00000498724 ARAP3Q8WWN8 1544 aa6.02□□□□□ -1.45
TNC-208ENST00000498724 DENND4BO75064 1496 aaPredicted RBP6.02□□□□□ -1.45
TNC-208ENST00000498724 ANP32AP39687 249 aaKnown RBP6.01□□□□□ -1.45
TNC-208ENST00000498724 MLECQ14165 292 aa6.01□□□□□ -1.45
TNC-208ENST00000498724 KIF7Q2M1P5 1343 aa6□□□□□ -1.45
TNC-208ENST00000498724 POLR1AO95602 1720 aaPredicted RBP6□□□□□ -1.45
TNC-208ENST00000498724 C11orf95C9JLR9 678 aaPredicted RBP6□□□□□ -1.45
TNC-208ENST00000498724 RTL5Q5HYW3 569 aaPredicted RBP6□□□□□ -1.45
TNC-208ENST00000498724 PIP4P2Q8N4L2 257 aa6□□□□□ -1.45
TNC-208ENST00000498724 NUDCQ9Y266 331 aa6□□□□□ -1.45
TNC-208ENST00000498724 RPRD2Q5VT52 1461 aaKnown RBP6□□□□□ -1.45
TNC-208ENST00000498724 PTPRMP28827 1452 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 ROCK1Q13464 1354 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 ANKRD30BQ9BXX2 1392 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 MNX1P50219 401 aaPredicted RBP5.99□□□□□ -1.45
TNC-208ENST00000498724 NUBP1P53384 320 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 HSPA2P54652 639 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 NBR1Q14596 966 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 CHADLQ6NUI6 762 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 FBXO41Q8TF61 875 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 CCDC136Q96JN2 1154 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 ABCA9Q8IUA7 1624 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 RAPGEF6Q8TEU7 1601 aa5.99□□□□□ -1.45
TNC-208ENST00000498724 NBPF8Q3BBV2 869 aa5.98□□□□□ -1.45
TNC-208ENST00000498724 DAPK1P53355 1430 aa5.98□□□□□ -1.45
TNC-208ENST00000498724 RNF123Q5XPI4 1314 aa5.98□□□□□ -1.45
TNC-208ENST00000498724 NUP153P49790 1475 aaKnown RBP5.97□□□□□ -1.45
TNC-208ENST00000498724 NEO1Q92859 1461 aa5.97□□□□□ -1.45
TNC-208ENST00000498724 PKD2Q13563 968 aa5.97□□□□□ -1.45
TNC-208ENST00000498724 IPO9Q96P70 1041 aaKnown RBP5.97□□□□□ -1.45
TNC-208ENST00000498724 CDK13Q14004 1512 aaKnown RBP5.97□□□□□ -1.45
TNC-208ENST00000498724 SPATA31E1Q6ZUB1 1445 aa5.97□□□□□ -1.45
TNC-208ENST00000498724 DNMT1P26358 1616 aaKnown RBP5.96□□□□□ -1.45
TNC-208ENST00000498724 ADAMTSL3P82987 1691 aa5.96□□□□□ -1.46
TNC-208ENST00000498724 CHRM1P11229 460 aaPredicted RBP5.96□□□□□ -1.46
TNC-208ENST00000498724 POLR3GLQ9BT43 218 aa5.96□□□□□ -1.46
TNC-208ENST00000498724 FANCAO15360 1455 aa5.96□□□□□ -1.46
TNC-208ENST00000498724 ROCK2O75116 1388 aaKnown RBP5.95□□□□□ -1.46
TNC-208ENST00000498724 DHX29Q7Z478 1369 aaKnown RBP5.95□□□□□ -1.46
TNC-208ENST00000498724 USP47Q96K76 1375 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 ABCC5O15440 1437 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 CEBPAP49715 358 aaPredicted RBP5.95□□□□□ -1.46
TNC-208ENST00000498724 CLCN6P51797 869 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 EFCAB2Q5VUJ9 269 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 KIF14Q15058 1648 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 MBD5Q9P267 1494 aa5.95□□□□□ -1.46
TNC-208ENST00000498724 BCORL1Q5H9F3 1711 aa5.94□□□□□ -1.46
TNC-208ENST00000498724 SCAPERQ9BY12 1400 aa5.94□□□□□ -1.46
TNC-208ENST00000498724 KIAA1107Q9UPP5 1409 aa5.94□□□□□ -1.46
TNC-208ENST00000498724 CNGB1Q14028 1251 aaPredicted RBP5.94□□□□□ -1.46
TNC-208ENST00000498724 ZNF467Q7Z7K2 595 aaPredicted RBP5.94□□□□□ -1.46
TNC-208ENST00000498724 AFAP1Q8N556 730 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms