RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
LMNA-217ENST00000498722 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
LMNA-217ENST00000498722 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
LMNA-217ENST00000498722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
LMNA-217ENST00000498722 NCOA1Q15788 1441 aa24.49■■□□□ 1.51
LMNA-217ENST00000498722 CEBPAP49715 358 aaPredicted RBP24.49■■□□□ 1.51
LMNA-217ENST00000498722 ERBINQ96RT1 1412 aa24.49■■□□□ 1.51
LMNA-217ENST00000498722 PTPRKQ15262 1439 aa24.47■■□□□ 1.51
LMNA-217ENST00000498722 CEP152O94986 1710 aa24.47■■□□□ 1.51
LMNA-217ENST00000498722 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
LMNA-217ENST00000498722 SETD1BQ9UPS6 1966 aaKnown RBP24.46■■□□□ 1.51
LMNA-217ENST00000498722 ZC3H13Q5T200 1668 aaKnown RBP24.44■■□□□ 1.5
LMNA-217ENST00000498722 PREX1Q8TCU6 1659 aa24.44■■□□□ 1.5
LMNA-217ENST00000498722 PPP6R1Q9UPN7 881 aa24.44■■□□□ 1.5
LMNA-217ENST00000498722 CFAP65Q6ZU64 1925 aaKnown RBP24.43■■□□□ 1.5
LMNA-217ENST00000498722 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
LMNA-217ENST00000498722 FAM135AQ9P2D6 1515 aa24.42■■□□□ 1.5
LMNA-217ENST00000498722 MROH1Q8NDA8 1641 aa24.42■■□□□ 1.5
LMNA-217ENST00000498722 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
LMNA-217ENST00000498722 DEPDC5O75140 1603 aa24.41■■□□□ 1.5
LMNA-217ENST00000498722 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
LMNA-217ENST00000498722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.51e-7■□□□□ 10.9
LMNA-217ENST00000498722 PRDM15P57071 1507 aaPredicted RBP24.38■■□□□ 1.49
LMNA-217ENST00000498722 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
LMNA-217ENST00000498722 CAMSAP1Q5T5Y3 1602 aa24.37■■□□□ 1.49
LMNA-217ENST00000498722 ABCC3O15438 1527 aa24.37■■□□□ 1.49
LMNA-217ENST00000498722 KANK1Q14678 1352 aa24.34■■□□□ 1.49
LMNA-217ENST00000498722 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
LMNA-217ENST00000498722 GCC2Q8IWJ2 1684 aa24.33■■□□□ 1.48
LMNA-217ENST00000498722 NPATQ14207 1427 aa24.31■■□□□ 1.48
LMNA-217ENST00000498722 UHRF1BP1Q6BDS2 1440 aa24.31■■□□□ 1.48
LMNA-217ENST00000498722 PZPP20742 1482 aa24.3■■□□□ 1.48
LMNA-217ENST00000498722 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
LMNA-217ENST00000498722 UNC13BO14795 1591 aa24.28■■□□□ 1.48
LMNA-217ENST00000498722 VWDEQ8N2E2 1590 aa24.25■■□□□ 1.47
LMNA-217ENST00000498722 HSPA2P54652 639 aa24.25■■□□□ 1.47
LMNA-217ENST00000498722 FBXO31Q5XUX0 539 aaPredicted RBP24.25■■□□□ 1.47
LMNA-217ENST00000498722 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
LMNA-217ENST00000498722 TET3O43151 1660 aa24.22■■□□□ 1.47
LMNA-217ENST00000498722 TNRQ92752 1358 aa24.21■■□□□ 1.47
LMNA-217ENST00000498722 NAIPQ13075 1403 aa24.2■■□□□ 1.46
LMNA-217ENST00000498722 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
LMNA-217ENST00000498722 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.46
LMNA-217ENST00000498722 EFCAB6Q5THR3 1501 aa24.19■■□□□ 1.46
LMNA-217ENST00000498722 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
LMNA-217ENST00000498722 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
LMNA-217ENST00000498722 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
LMNA-217ENST00000498722 SPATA31D1Q6ZQQ2 1576 aa24.17■■□□□ 1.46
LMNA-217ENST00000498722 NUP155O75694 1391 aa24.15■■□□□ 1.46
LMNA-217ENST00000498722 ARHGAP31Q2M1Z3 1444 aa24.15■■□□□ 1.46
LMNA-217ENST00000498722 E9PCH4 1651 aa24.13■■□□□ 1.45
LMNA-217ENST00000498722 A2ML1A8K2U0 1454 aa24.12■■□□□ 1.45
LMNA-217ENST00000498722 STRCQ7RTU9 1775 aa24.12■■□□□ 1.45
LMNA-217ENST00000498722 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
LMNA-217ENST00000498722 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
LMNA-217ENST00000498722 TRIM52Q96A61 297 aa24.09■■□□□ 1.45
LMNA-217ENST00000498722 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
LMNA-217ENST00000498722 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
LMNA-217ENST00000498722 SYNMO15061 1565 aa24.05■■□□□ 1.44
LMNA-217ENST00000498722 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
LMNA-217ENST00000498722 PIK3C2BO00750 1634 aa24.05■■□□□ 1.44
LMNA-217ENST00000498722 POLR1AO95602 1720 aaPredicted RBP24.05■■□□□ 1.44
LMNA-217ENST00000498722 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
LMNA-217ENST00000498722 MYO5BQ9ULV0 1848 aa24.01■■□□□ 1.43
LMNA-217ENST00000498722 SETD5Q9C0A6 1442 aa24■■□□□ 1.43
LMNA-217ENST00000498722 NOS1P29475 1434 aa24■■□□□ 1.43
LMNA-217ENST00000498722 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
LMNA-217ENST00000498722 PLA2R1Q13018 1463 aa23.99■■□□□ 1.43
LMNA-217ENST00000498722 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
LMNA-217ENST00000498722 KDM5AP29375 1690 aaKnown RBP23.96■■□□□ 1.43
LMNA-217ENST00000498722 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.43
LMNA-217ENST00000498722 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
LMNA-217ENST00000498722 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
LMNA-217ENST00000498722 IDI1Q13907 227 aa23.93■■□□□ 1.42
LMNA-217ENST00000498722 RAB3GAP2Q9H2M9 1393 aa23.92■■□□□ 1.42
LMNA-217ENST00000498722 SLC52A1Q9NWF4 448 aa23.92■■□□□ 1.42
LMNA-217ENST00000498722 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
LMNA-217ENST00000498722 PKD2Q13563 968 aa23.91■■□□□ 1.42
LMNA-217ENST00000498722 ANKLE2Q86XL3 938 aa23.89■■□□□ 1.42
LMNA-217ENST00000498722 KIF1BO60333 1816 aa23.89■■□□□ 1.41
LMNA-217ENST00000498722 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
LMNA-217ENST00000498722 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
LMNA-217ENST00000498722 HRCP23327 699 aa23.87■■□□□ 1.41
LMNA-217ENST00000498722 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
LMNA-217ENST00000498722 PTPRTO14522 1441 aa23.87■■□□□ 1.41
LMNA-217ENST00000498722 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
LMNA-217ENST00000498722 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
LMNA-217ENST00000498722 CLTCL1P53675 1640 aa23.85■■□□□ 1.41
LMNA-217ENST00000498722 TRPM2O94759 1503 aa23.85■■□□□ 1.41
LMNA-217ENST00000498722 SLIT1O75093 1534 aa23.84■■□□□ 1.41
LMNA-217ENST00000498722 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.4
LMNA-217ENST00000498722 EID1Q9Y6B2 187 aa23.83■■□□□ 1.4
LMNA-217ENST00000498722 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
LMNA-217ENST00000498722 FOXD1Q16676 465 aa23.82■■□□□ 1.4
LMNA-217ENST00000498722 TMEM2Q9UHN6 1383 aa23.82■■□□□ 1.4
LMNA-217ENST00000498722 ARHGAP23Q9P227 1491 aa23.81■■□□□ 1.4
LMNA-217ENST00000498722 TXNDC2Q86VQ3 553 aa23.81■■□□□ 1.4
LMNA-217ENST00000498722 NPHP4O75161 1426 aaPredicted RBP23.8■■□□□ 1.4
LMNA-217ENST00000498722 MED14O60244 1454 aa23.77■■□□□ 1.4
LMNA-217ENST00000498722 LTKP29376 864 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms