RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 WASHC2CQ9Y4E1 1318 aa40.11■■■■■ 4.01
MKRN1-216ENST00000498535 A2ML1A8K2U0 1454 aa40.08■■■■■ 4.01
MKRN1-216ENST00000498535 IQSEC2Q5JU85 1478 aa40.08■■■■■ 4.01
MKRN1-216ENST00000498535 KDM5DQ9BY66 1539 aa40.08■■■■■ 4.01
MKRN1-216ENST00000498535 FAM135AQ9P2D6 1515 aa40.08■■■■■ 4.01
MKRN1-216ENST00000498535 TCOF1Q13428 1488 aaKnown RBP40.07■■■■■ 4
MKRN1-216ENST00000498535 FBXO31Q5XUX0 539 aaPredicted RBP40.05■■■■■ 4
MKRN1-216ENST00000498535 TNRQ92752 1358 aa40.04■■■■■ 4
MKRN1-216ENST00000498535 MAP3K1Q13233 1512 aa40.04■■■■■ 4
MKRN1-216ENST00000498535 ZNF335Q9H4Z2 1342 aaPredicted RBP40.03■■■■■ 4
MKRN1-216ENST00000498535 KANK4Q5T7N3 995 aaPredicted RBP40.03■■■■■ 4
MKRN1-216ENST00000498535 PZPP20742 1482 aa40.02■■■■■ 4
MKRN1-216ENST00000498535 DNMT1P26358 1616 aaKnown RBP40■■■■□ 3.99
MKRN1-216ENST00000498535 MYOM3Q5VTT5 1437 aa39.95■■■■□ 3.99
MKRN1-216ENST00000498535 MIA2Q96PC5 1412 aa39.95■■■■□ 3.99
MKRN1-216ENST00000498535 MAST1Q9Y2H9 1570 aa39.93■■■■□ 3.98
MKRN1-216ENST00000498535 APLP2Q06481 763 aa39.88■■■■□ 3.97
MKRN1-216ENST00000498535 THEMISQ8N1K5 641 aaPredicted RBP39.86■■■■□ 3.97
MKRN1-216ENST00000498535 NLRP1Q9C000 1473 aa39.85■■■■□ 3.97
MKRN1-216ENST00000498535 DISP3Q9P2K9 1392 aa39.84■■■■□ 3.97
MKRN1-216ENST00000498535 RNF17Q9BXT8 1623 aaKnown RBP39.84■■■■□ 3.97
MKRN1-216ENST00000498535 UBAP1LF5GYI3 381 aa39.84■■■■□ 3.97
MKRN1-216ENST00000498535 ANKLE2Q86XL3 938 aa39.83■■■■□ 3.97
MKRN1-216ENST00000498535 POLR1AO95602 1720 aaPredicted RBP39.82■■■■□ 3.96
MKRN1-216ENST00000498535 EIF2AK4Q9P2K8 1649 aaKnown RBP39.81■■■■□ 3.96
MKRN1-216ENST00000498535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.8■■■■□ 3.96
MKRN1-216ENST00000498535 ABCC3O15438 1527 aa39.79■■■■□ 3.96
MKRN1-216ENST00000498535 ZC3H13Q5T200 1668 aaKnown RBP39.78■■■■□ 3.96
MKRN1-216ENST00000498535 UGGT1Q9NYU2 1555 aa39.78■■■■□ 3.96
MKRN1-216ENST00000498535 NEURL4Q96JN8 1562 aa39.75■■■■□ 3.95
MKRN1-216ENST00000498535 DUOX2Q9NRD8 1548 aa39.75■■■■□ 3.95
MKRN1-216ENST00000498535 SPATA31D1Q6ZQQ2 1576 aa39.68■■■■□ 3.94
MKRN1-216ENST00000498535 KIF15Q9NS87 1388 aa39.68■■■■□ 3.94
MKRN1-216ENST00000498535 MROH1Q8NDA8 1641 aa39.67■■■■□ 3.94
MKRN1-216ENST00000498535 CPS1P31327 1500 aa39.66■■■■□ 3.94
MKRN1-216ENST00000498535 PTPN23Q9H3S7 1636 aa39.66■■■■□ 3.94
MKRN1-216ENST00000498535 ERVK-7P63135 1459 aa39.66■■■■□ 3.94
MKRN1-216ENST00000498535 SHANK2Q9UPX8 1470 aa39.66■■■■□ 3.94
MKRN1-216ENST00000498535 ABCC5O15440 1437 aa39.65■■■■□ 3.94
MKRN1-216ENST00000498535 RRP7BPQ9NSQ0 103 aa39.65■■■■□ 3.94
MKRN1-216ENST00000498535 NPHP4O75161 1426 aaPredicted RBP39.65■■■■□ 3.94
MKRN1-216ENST00000498535 DEPDC5O75140 1603 aa39.64■■■■□ 3.94
MKRN1-216ENST00000498535 CEP152O94986 1710 aa39.62■■■■□ 3.93
MKRN1-216ENST00000498535 MED14O60244 1454 aa39.62■■■■□ 3.93
MKRN1-216ENST00000498535 CROCC2H7BZ55 1655 aa39.6■■■■□ 3.93
MKRN1-216ENST00000498535 ERBINQ96RT1 1412 aa39.6■■■■□ 3.93
MKRN1-216ENST00000498535 CFAP65Q6ZU64 1925 aaKnown RBP39.59■■■■□ 3.93
MKRN1-216ENST00000498535 ILDR2Q71H61 639 aa39.58■■■■□ 3.93
MKRN1-216ENST00000498535 DAPK1P53355 1430 aa39.57■■■■□ 3.93
MKRN1-216ENST00000498535 FGD6Q6ZV73 1430 aa39.57■■■■□ 3.93
MKRN1-216ENST00000498535 TOM1O60784 492 aa39.56■■■■□ 3.92
MKRN1-216ENST00000498535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.55■■■■□ 3.922e-7■■□□□ 12.3
MKRN1-216ENST00000498535 SCAF1Q9H7N4 1312 aaKnown RBP39.55■■■■□ 3.92
MKRN1-216ENST00000498535 PRDM15P57071 1507 aaPredicted RBP39.54■■■■□ 3.92
MKRN1-216ENST00000498535 VWDEQ8N2E2 1590 aa39.54■■■■□ 3.92
MKRN1-216ENST00000498535 IQGAP1P46940 1657 aa39.53■■■■□ 3.92
MKRN1-216ENST00000498535 ARHGAP31Q2M1Z3 1444 aa39.51■■■■□ 3.92
MKRN1-216ENST00000498535 KANK1Q14678 1352 aa39.5■■■■□ 3.91
MKRN1-216ENST00000498535 PIP4K2BP78356 416 aa39.5■■■■□ 3.91
MKRN1-216ENST00000498535 CHIC2Q9UKJ5 165 aa39.49■■■■□ 3.91
MKRN1-216ENST00000498535 ANKRD30AQ9BXX3 1397 aa39.48■■■■□ 3.91
MKRN1-216ENST00000498535 UBR1Q8IWV7 1749 aa39.45■■■■□ 3.91
MKRN1-216ENST00000498535 SOCS7O14512 581 aa39.4■■■■□ 3.9
MKRN1-216ENST00000498535 SCAF11Q99590 1463 aaKnown RBP39.4■■■■□ 3.9
MKRN1-216ENST00000498535 HSPA1LP34931 641 aa39.39■■■■□ 3.9
MKRN1-216ENST00000498535 TXNDC2Q86VQ3 553 aa39.39■■■■□ 3.9
MKRN1-216ENST00000498535 EID1Q9Y6B2 187 aa39.37■■■■□ 3.89
MKRN1-216ENST00000498535 STAG3Q9UJ98 1225 aa39.36■■■■□ 3.89
MKRN1-216ENST00000498535 LTKP29376 864 aa39.35■■■■□ 3.89
MKRN1-216ENST00000498535 SLIT1O75093 1534 aa39.34■■■■□ 3.89
MKRN1-216ENST00000498535 ARHGAP23Q9P227 1491 aa39.33■■■■□ 3.89
MKRN1-216ENST00000498535 FAM50AQ14320 339 aaKnown RBP39.33■■■■□ 3.89
MKRN1-216ENST00000498535 LMTK2Q8IWU2 1503 aa39.3■■■■□ 3.88
MKRN1-216ENST00000498535 LRRC7Q96NW7 1537 aa39.3■■■■□ 3.88
MKRN1-216ENST00000498535 STRCP1A6NGW2 1772 aa39.29■■■■□ 3.88
MKRN1-216ENST00000498535 PIK3C2BO00750 1634 aa39.28■■■■□ 3.88
MKRN1-216ENST00000498535 SYNMO15061 1565 aa39.26■■■■□ 3.88
MKRN1-216ENST00000498535 ADGRL2O95490 1459 aa39.25■■■■□ 3.87
MKRN1-216ENST00000498535 TMEM2Q9UHN6 1383 aa39.25■■■■□ 3.87
MKRN1-216ENST00000498535 IDI1Q13907 227 aa39.24■■■■□ 3.87
MKRN1-216ENST00000498535 EFCAB6Q5THR3 1501 aa39.19■■■■□ 3.86
MKRN1-216ENST00000498535 ALKQ9UM73 1620 aa39.19■■■■□ 3.86
MKRN1-216ENST00000498535 KDM5AP29375 1690 aaKnown RBP39.17■■■■□ 3.86
MKRN1-216ENST00000498535 ANKRD50Q9ULJ7 1429 aa39.16■■■■□ 3.86
MKRN1-216ENST00000498535 NOS1P29475 1434 aa39.14■■■■□ 3.86
MKRN1-216ENST00000498535 SLC52A1Q9NWF4 448 aa39.13■■■■□ 3.85
MKRN1-216ENST00000498535 MED1Q15648 1581 aaPredicted RBP39.1■■■■□ 3.85
MKRN1-216ENST00000498535 SENP3Q9H4L4 574 aaPredicted RBP39.09■■■■□ 3.85
MKRN1-216ENST00000498535 RPRD2Q5VT52 1461 aaKnown RBP39.06■■■■□ 3.84
MKRN1-216ENST00000498535 ADGRB3O60242 1522 aa39.05■■■■□ 3.84
MKRN1-216ENST00000498535 SLC26A8Q96RN1 970 aa39.03■■■■□ 3.84
MKRN1-216ENST00000498535 KCNA6P17658 529 aa39.01■■■■□ 3.84
MKRN1-216ENST00000498535 BCANQ96GW7 911 aa39.01■■■■□ 3.84
MKRN1-216ENST00000498535 XIRP1Q702N8 1843 aaKnown RBP38.98■■■■□ 3.83
MKRN1-216ENST00000498535 TET3O43151 1660 aa38.97■■■■□ 3.83
MKRN1-216ENST00000498535 PHF23Q9BUL5 403 aaPredicted RBP38.97■■■■□ 3.83
MKRN1-216ENST00000498535 PROSER2Q86WR7 435 aaPredicted RBP38.95■■■■□ 3.83
MKRN1-216ENST00000498535 TMEM94Q12767 1356 aa38.95■■■■□ 3.83
MKRN1-216ENST00000498535 HDGFP51858 240 aaKnown RBP38.94■■■■□ 3.82
MKRN1-216ENST00000498535 ROCK1Q13464 1354 aa38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms