RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
CNOT4-211ENST00000498534 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
CNOT4-211ENST00000498534 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
CNOT4-211ENST00000498534 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
CNOT4-211ENST00000498534 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
CNOT4-211ENST00000498534 MYO3AQ8NEV4 1616 aa19.02■□□□□ 0.64
CNOT4-211ENST00000498534 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
CNOT4-211ENST00000498534 ZNF142P52746 1687 aaPredicted RBP19■□□□□ 0.63
CNOT4-211ENST00000498534 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
CNOT4-211ENST00000498534 A2ML1A8K2U0 1454 aa18.99■□□□□ 0.63
CNOT4-211ENST00000498534 TNRQ92752 1358 aa18.99■□□□□ 0.63
CNOT4-211ENST00000498534 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
CNOT4-211ENST00000498534 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
CNOT4-211ENST00000498534 LRRC9Q6ZRR7 1453 aa18.98■□□□□ 0.63
CNOT4-211ENST00000498534 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CNOT4-211ENST00000498534 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
CNOT4-211ENST00000498534 ARHGEF5Q12774 1597 aa18.97■□□□□ 0.63
CNOT4-211ENST00000498534 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
CNOT4-211ENST00000498534 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
CNOT4-211ENST00000498534 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
CNOT4-211ENST00000498534 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
CNOT4-211ENST00000498534 PZPP20742 1482 aa18.95■□□□□ 0.62
CNOT4-211ENST00000498534 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
CNOT4-211ENST00000498534 APLP2Q06481 763 aa18.93■□□□□ 0.62
CNOT4-211ENST00000498534 MIA2Q96PC5 1412 aa18.92■□□□□ 0.62
CNOT4-211ENST00000498534 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
CNOT4-211ENST00000498534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
CNOT4-211ENST00000498534 NLRP1Q9C000 1473 aa18.89■□□□□ 0.61
CNOT4-211ENST00000498534 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
CNOT4-211ENST00000498534 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
CNOT4-211ENST00000498534 TOM1O60784 492 aa18.85■□□□□ 0.61
CNOT4-211ENST00000498534 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
CNOT4-211ENST00000498534 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
CNOT4-211ENST00000498534 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
CNOT4-211ENST00000498534 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
CNOT4-211ENST00000498534 SHANK2Q9UPX8 1470 aa18.83■□□□□ 0.6
CNOT4-211ENST00000498534 RNF17Q9BXT8 1623 aaKnown RBP18.82■□□□□ 0.6
CNOT4-211ENST00000498534 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
CNOT4-211ENST00000498534 ABCC3O15438 1527 aa18.82■□□□□ 0.6
CNOT4-211ENST00000498534 CPS1P31327 1500 aa18.81■□□□□ 0.6
CNOT4-211ENST00000498534 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
CNOT4-211ENST00000498534 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
CNOT4-211ENST00000498534 EIF2AK4Q9P2K8 1649 aaKnown RBP18.81■□□□□ 0.6
CNOT4-211ENST00000498534 DUOX2Q9NRD8 1548 aa18.8■□□□□ 0.6
CNOT4-211ENST00000498534 SOCS7O14512 581 aa18.8■□□□□ 0.6
CNOT4-211ENST00000498534 NPHP4O75161 1426 aaPredicted RBP18.8■□□□□ 0.6
CNOT4-211ENST00000498534 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
CNOT4-211ENST00000498534 ZC3H13Q5T200 1668 aaKnown RBP18.79■□□□□ 0.6
CNOT4-211ENST00000498534 SPATA31D1Q6ZQQ2 1576 aa18.79■□□□□ 0.6
CNOT4-211ENST00000498534 MED14O60244 1454 aa18.78■□□□□ 0.6
CNOT4-211ENST00000498534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■□□□ 11.9
CNOT4-211ENST00000498534 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
CNOT4-211ENST00000498534 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
CNOT4-211ENST00000498534 ERVK-7P63135 1459 aa18.77■□□□□ 0.59
CNOT4-211ENST00000498534 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
CNOT4-211ENST00000498534 ABCC5O15440 1437 aa18.75■□□□□ 0.59
CNOT4-211ENST00000498534 KANK1Q14678 1352 aa18.74■□□□□ 0.59
CNOT4-211ENST00000498534 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
CNOT4-211ENST00000498534 HSPA1LP34931 641 aa18.73■□□□□ 0.59
CNOT4-211ENST00000498534 TXNDC2Q86VQ3 553 aa18.73■□□□□ 0.59
CNOT4-211ENST00000498534 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
CNOT4-211ENST00000498534 EID1Q9Y6B2 187 aa18.73■□□□□ 0.59
CNOT4-211ENST00000498534 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
CNOT4-211ENST00000498534 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
CNOT4-211ENST00000498534 MROH1Q8NDA8 1641 aa18.72■□□□□ 0.59
CNOT4-211ENST00000498534 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
CNOT4-211ENST00000498534 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
CNOT4-211ENST00000498534 CEP152O94986 1710 aa18.71■□□□□ 0.59
CNOT4-211ENST00000498534 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
CNOT4-211ENST00000498534 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
CNOT4-211ENST00000498534 DAPK1P53355 1430 aa18.71■□□□□ 0.59
CNOT4-211ENST00000498534 ARHGAP31Q2M1Z3 1444 aa18.71■□□□□ 0.59
CNOT4-211ENST00000498534 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
CNOT4-211ENST00000498534 LTKP29376 864 aa18.68■□□□□ 0.58
CNOT4-211ENST00000498534 SCAF11Q99590 1463 aaKnown RBP18.67■□□□□ 0.58
CNOT4-211ENST00000498534 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
CNOT4-211ENST00000498534 UBR1Q8IWV7 1749 aa18.66■□□□□ 0.58
CNOT4-211ENST00000498534 PRDM15P57071 1507 aaPredicted RBP18.66■□□□□ 0.58
CNOT4-211ENST00000498534 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
CNOT4-211ENST00000498534 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
CNOT4-211ENST00000498534 IDI1Q13907 227 aa18.63■□□□□ 0.57
CNOT4-211ENST00000498534 SLIT1O75093 1534 aa18.63■□□□□ 0.57
CNOT4-211ENST00000498534 ARHGAP23Q9P227 1491 aa18.62■□□□□ 0.57
CNOT4-211ENST00000498534 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
CNOT4-211ENST00000498534 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
CNOT4-211ENST00000498534 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
CNOT4-211ENST00000498534 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.56
CNOT4-211ENST00000498534 PIK3C2BO00750 1634 aa18.57■□□□□ 0.56
CNOT4-211ENST00000498534 SYNMO15061 1565 aa18.57■□□□□ 0.56
CNOT4-211ENST00000498534 BCANQ96GW7 911 aa18.57■□□□□ 0.56
CNOT4-211ENST00000498534 EFCAB6Q5THR3 1501 aa18.55■□□□□ 0.56
CNOT4-211ENST00000498534 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
CNOT4-211ENST00000498534 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
CNOT4-211ENST00000498534 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
CNOT4-211ENST00000498534 KCNA6P17658 529 aa18.54■□□□□ 0.56
CNOT4-211ENST00000498534 HDGFP51858 240 aaKnown RBP18.54■□□□□ 0.56
CNOT4-211ENST00000498534 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
CNOT4-211ENST00000498534 MED1Q15648 1581 aaPredicted RBP18.54■□□□□ 0.56
CNOT4-211ENST00000498534 NOS1P29475 1434 aa18.53■□□□□ 0.56
CNOT4-211ENST00000498534 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms