RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
SHANK2-217ENST00000498519 FAM135AQ9P2D6 1515 aa21.79■■□□□ 1.08
SHANK2-217ENST00000498519 WASHC2CQ9Y4E1 1318 aa21.79■■□□□ 1.08
SHANK2-217ENST00000498519 TNRQ92752 1358 aa21.76■■□□□ 1.07
SHANK2-217ENST00000498519 ILDR2Q71H61 639 aa21.76■■□□□ 1.07
SHANK2-217ENST00000498519 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
SHANK2-217ENST00000498519 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
SHANK2-217ENST00000498519 KDM5DQ9BY66 1539 aa21.73■■□□□ 1.07
SHANK2-217ENST00000498519 SPATA31D1Q6ZQQ2 1576 aa21.73■■□□□ 1.07
SHANK2-217ENST00000498519 PZPP20742 1482 aa21.72■■□□□ 1.07
SHANK2-217ENST00000498519 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
SHANK2-217ENST00000498519 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
SHANK2-217ENST00000498519 FBXO31Q5XUX0 539 aaPredicted RBP21.71■■□□□ 1.07
SHANK2-217ENST00000498519 TOM1O60784 492 aa21.69■■□□□ 1.06
SHANK2-217ENST00000498519 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
SHANK2-217ENST00000498519 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
SHANK2-217ENST00000498519 NLRP1Q9C000 1473 aa21.68■■□□□ 1.06
SHANK2-217ENST00000498519 CPS1P31327 1500 aa21.66■■□□□ 1.06
SHANK2-217ENST00000498519 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
SHANK2-217ENST00000498519 SHANK2Q9UPX8 1470 aa21.63■■□□□ 1.05
SHANK2-217ENST00000498519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.62■■□□□ 1.05
SHANK2-217ENST00000498519 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
SHANK2-217ENST00000498519 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
SHANK2-217ENST00000498519 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
SHANK2-217ENST00000498519 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
SHANK2-217ENST00000498519 NPHP4O75161 1426 aaPredicted RBP21.58■■□□□ 1.05
SHANK2-217ENST00000498519 PIP4K2BP78356 416 aa21.58■■□□□ 1.05
SHANK2-217ENST00000498519 MED14O60244 1454 aa21.58■■□□□ 1.04
SHANK2-217ENST00000498519 NEURL4Q96JN8 1562 aa21.55■■□□□ 1.04
SHANK2-217ENST00000498519 HSPA1LP34931 641 aa21.54■■□□□ 1.04
SHANK2-217ENST00000498519 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
SHANK2-217ENST00000498519 MYOM3Q5VTT5 1437 aa21.54■■□□□ 1.04
SHANK2-217ENST00000498519 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
SHANK2-217ENST00000498519 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.04
SHANK2-217ENST00000498519 DEPDC5O75140 1603 aa21.52■■□□□ 1.04
SHANK2-217ENST00000498519 ABCC3O15438 1527 aa21.52■■□□□ 1.04
SHANK2-217ENST00000498519 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
SHANK2-217ENST00000498519 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
SHANK2-217ENST00000498519 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
SHANK2-217ENST00000498519 APLP2Q06481 763 aa21.49■■□□□ 1.03
SHANK2-217ENST00000498519 VWDEQ8N2E2 1590 aa21.48■■□□□ 1.03
SHANK2-217ENST00000498519 ERVK-7P63135 1459 aa21.48■■□□□ 1.03
SHANK2-217ENST00000498519 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
SHANK2-217ENST00000498519 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-217ENST00000498519 EID1Q9Y6B2 187 aa21.45■■□□□ 1.02
SHANK2-217ENST00000498519 ARHGAP31Q2M1Z3 1444 aa21.44■■□□□ 1.02
SHANK2-217ENST00000498519 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
SHANK2-217ENST00000498519 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
SHANK2-217ENST00000498519 ERBINQ96RT1 1412 aa21.43■■□□□ 1.02
SHANK2-217ENST00000498519 IQGAP1P46940 1657 aa21.42■■□□□ 1.02
SHANK2-217ENST00000498519 KANK1Q14678 1352 aa21.42■■□□□ 1.02
SHANK2-217ENST00000498519 PHF23Q9BUL5 403 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-217ENST00000498519 TXNDC2Q86VQ3 553 aa21.41■■□□□ 1.02
SHANK2-217ENST00000498519 SCAF11Q99590 1463 aaKnown RBP21.4■■□□□ 1.02
SHANK2-217ENST00000498519 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
SHANK2-217ENST00000498519 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.01
SHANK2-217ENST00000498519 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
SHANK2-217ENST00000498519 MED1Q15648 1581 aaPredicted RBP21.38■■□□□ 1.01
SHANK2-217ENST00000498519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.014e-7■□□□□ 10.4
SHANK2-217ENST00000498519 ABCC5O15440 1437 aa21.37■■□□□ 1.01
SHANK2-217ENST00000498519 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
SHANK2-217ENST00000498519 SYNMO15061 1565 aa21.36■■□□□ 1.01
SHANK2-217ENST00000498519 SLIT1O75093 1534 aa21.35■■□□□ 1.01
SHANK2-217ENST00000498519 PRDM15P57071 1507 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-217ENST00000498519 ARHGAP23Q9P227 1491 aa21.35■■□□□ 1.01
SHANK2-217ENST00000498519 LTKP29376 864 aa21.35■■□□□ 1.01
SHANK2-217ENST00000498519 ANKRD30AQ9BXX3 1397 aa21.34■■□□□ 1.01
SHANK2-217ENST00000498519 TMEM2Q9UHN6 1383 aa21.33■■□□□ 1
SHANK2-217ENST00000498519 DAPK1P53355 1430 aa21.31■■□□□ 1
SHANK2-217ENST00000498519 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
SHANK2-217ENST00000498519 ALKQ9UM73 1620 aa21.29■■□□□ 1
SHANK2-217ENST00000498519 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
SHANK2-217ENST00000498519 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
SHANK2-217ENST00000498519 SLC52A1Q9NWF4 448 aa21.27■■□□□ 1
SHANK2-217ENST00000498519 CEP152O94986 1710 aa21.26■□□□□ 0.99
SHANK2-217ENST00000498519 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
SHANK2-217ENST00000498519 IDI1Q13907 227 aa21.26■□□□□ 0.99
SHANK2-217ENST00000498519 KCNA6P17658 529 aa21.25■□□□□ 0.99
SHANK2-217ENST00000498519 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
SHANK2-217ENST00000498519 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
SHANK2-217ENST00000498519 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
SHANK2-217ENST00000498519 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
SHANK2-217ENST00000498519 HDGFP51858 240 aaKnown RBP21.22■□□□□ 0.99
SHANK2-217ENST00000498519 CROCC2H7BZ55 1655 aa21.21■□□□□ 0.99
SHANK2-217ENST00000498519 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.99
SHANK2-217ENST00000498519 TMEM94Q12767 1356 aa21.2■□□□□ 0.98
SHANK2-217ENST00000498519 KDM5AP29375 1690 aaKnown RBP21.19■□□□□ 0.98
SHANK2-217ENST00000498519 PROSER2Q86WR7 435 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-217ENST00000498519 BCANQ96GW7 911 aa21.19■□□□□ 0.98
SHANK2-217ENST00000498519 NOS1P29475 1434 aa21.19■□□□□ 0.98
SHANK2-217ENST00000498519 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
SHANK2-217ENST00000498519 SLC26A8Q96RN1 970 aa21.18■□□□□ 0.98
SHANK2-217ENST00000498519 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
SHANK2-217ENST00000498519 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
SHANK2-217ENST00000498519 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
SHANK2-217ENST00000498519 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
SHANK2-217ENST00000498519 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
SHANK2-217ENST00000498519 MSH6P52701 1360 aa21.13■□□□□ 0.97
SHANK2-217ENST00000498519 PPP1R15AO75807 674 aaPredicted RBP21.13■□□□□ 0.97
SHANK2-217ENST00000498519 ADGRB3O60242 1522 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms