RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 ZNF142P52746 1687 aaPredicted RBP31.91■■■□□ 2.7
LMBR1-219ENST00000498034 KDM5DQ9BY66 1539 aa31.9■■■□□ 2.7
LMBR1-219ENST00000498034 WASHC2CQ9Y4E1 1318 aa31.89■■■□□ 2.7
LMBR1-219ENST00000498034 CEP170BQ9Y4F5 1589 aaPredicted RBP31.89■■■□□ 2.7
LMBR1-219ENST00000498034 FBXO31Q5XUX0 539 aaPredicted RBP31.87■■■□□ 2.69
LMBR1-219ENST00000498034 FAM135AQ9P2D6 1515 aa31.86■■■□□ 2.69
LMBR1-219ENST00000498034 NCKAP5LQ9HCH0 1330 aa31.86■■■□□ 2.69
LMBR1-219ENST00000498034 PTPN23Q9H3S7 1636 aa31.83■■■□□ 2.69
LMBR1-219ENST00000498034 PZPP20742 1482 aa31.83■■■□□ 2.69
LMBR1-219ENST00000498034 TNRQ92752 1358 aa31.81■■■□□ 2.68
LMBR1-219ENST00000498034 A2ML1A8K2U0 1454 aa31.8■■■□□ 2.68
LMBR1-219ENST00000498034 RNF17Q9BXT8 1623 aaKnown RBP31.8■■■□□ 2.68
LMBR1-219ENST00000498034 PLA2R1Q13018 1463 aa31.79■■■□□ 2.68
LMBR1-219ENST00000498034 ABCC5O15440 1437 aa31.78■■■□□ 2.68
LMBR1-219ENST00000498034 EIF2AK4Q9P2K8 1649 aaKnown RBP31.78■■■□□ 2.68
LMBR1-219ENST00000498034 DNMT1P26358 1616 aaKnown RBP31.77■■■□□ 2.68
LMBR1-219ENST00000498034 FGD6Q6ZV73 1430 aa31.76■■■□□ 2.68
LMBR1-219ENST00000498034 PKD2Q13563 968 aa31.76■■■□□ 2.67
LMBR1-219ENST00000498034 TCOF1Q13428 1488 aaKnown RBP31.75■■■□□ 2.67
LMBR1-219ENST00000498034 CROCC2H7BZ55 1655 aa31.75■■■□□ 2.67
LMBR1-219ENST00000498034 LTBP4Q8N2S1 1624 aa31.75■■■□□ 2.67
LMBR1-219ENST00000498034 DUOX2Q9NRD8 1548 aa31.75■■■□□ 2.67
LMBR1-219ENST00000498034 ABCC3O15438 1527 aa31.73■■■□□ 2.67
LMBR1-219ENST00000498034 SHANK2Q9UPX8 1470 aa31.72■■■□□ 2.67
LMBR1-219ENST00000498034 MROH1Q8NDA8 1641 aa31.72■■■□□ 2.67
LMBR1-219ENST00000498034 DAPK1P53355 1430 aa31.72■■■□□ 2.67
LMBR1-219ENST00000498034 KIF15Q9NS87 1388 aa31.71■■■□□ 2.67
LMBR1-219ENST00000498034 RRP7BPQ9NSQ0 103 aa31.71■■■□□ 2.67
LMBR1-219ENST00000498034 ZC3H13Q5T200 1668 aaKnown RBP31.7■■■□□ 2.66
LMBR1-219ENST00000498034 ZNF335Q9H4Z2 1342 aaPredicted RBP31.66■■■□□ 2.66
LMBR1-219ENST00000498034 CEP152O94986 1710 aa31.66■■■□□ 2.66
LMBR1-219ENST00000498034 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
LMBR1-219ENST00000498034 NLRP1Q9C000 1473 aa31.64■■■□□ 2.66
LMBR1-219ENST00000498034 ERBINQ96RT1 1412 aa31.63■■■□□ 2.65
LMBR1-219ENST00000498034 SPATA31D1Q6ZQQ2 1576 aa31.6■■■□□ 2.65
LMBR1-219ENST00000498034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.6■■■□□ 2.654e-7■■■■□ 21.6
LMBR1-219ENST00000498034 UGGT1Q9NYU2 1555 aa31.6■■■□□ 2.65
LMBR1-219ENST00000498034 POLR1AO95602 1720 aaPredicted RBP31.59■■■□□ 2.65
LMBR1-219ENST00000498034 THEMISQ8N1K5 641 aaPredicted RBP31.59■■■□□ 2.65
LMBR1-219ENST00000498034 ERVK-7P63135 1459 aa31.59■■■□□ 2.65
LMBR1-219ENST00000498034 CFAP65Q6ZU64 1925 aaKnown RBP31.57■■■□□ 2.64
LMBR1-219ENST00000498034 ANKRD30AQ9BXX3 1397 aa31.57■■■□□ 2.64
LMBR1-219ENST00000498034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.57■■■□□ 2.641e-8■■■□□ 15.2
LMBR1-219ENST00000498034 PRDM15P57071 1507 aaPredicted RBP31.57■■■□□ 2.64
LMBR1-219ENST00000498034 NEURL4Q96JN8 1562 aa31.56■■■□□ 2.64
LMBR1-219ENST00000498034 IQSEC2Q5JU85 1478 aa31.56■■■□□ 2.64
LMBR1-219ENST00000498034 FAM50AQ14320 339 aaKnown RBP31.55■■■□□ 2.64
LMBR1-219ENST00000498034 ANKLE2Q86XL3 938 aa31.55■■■□□ 2.64
LMBR1-219ENST00000498034 DEPDC5O75140 1603 aa31.52■■■□□ 2.64
LMBR1-219ENST00000498034 ARHGAP31Q2M1Z3 1444 aa31.49■■■□□ 2.63
LMBR1-219ENST00000498034 KANK1Q14678 1352 aa31.47■■■□□ 2.63
LMBR1-219ENST00000498034 ADGRL2O95490 1459 aa31.46■■■□□ 2.63
LMBR1-219ENST00000498034 NPHP4O75161 1426 aaPredicted RBP31.44■■■□□ 2.62
LMBR1-219ENST00000498034 MED14O60244 1454 aa31.43■■■□□ 2.62
LMBR1-219ENST00000498034 UBR1Q8IWV7 1749 aa31.41■■■□□ 2.62
LMBR1-219ENST00000498034 VWDEQ8N2E2 1590 aa31.4■■■□□ 2.62
LMBR1-219ENST00000498034 UBAP1LF5GYI3 381 aa31.39■■■□□ 2.62
LMBR1-219ENST00000498034 LMTK2Q8IWU2 1503 aa31.39■■■□□ 2.61
LMBR1-219ENST00000498034 IQGAP1P46940 1657 aa31.37■■■□□ 2.61
LMBR1-219ENST00000498034 ANKRD50Q9ULJ7 1429 aa31.35■■■□□ 2.61
LMBR1-219ENST00000498034 PPARGC1BQ86YN6 1023 aaKnown RBP31.35■■■□□ 2.61
LMBR1-219ENST00000498034 CPS1P31327 1500 aa31.34■■■□□ 2.61
LMBR1-219ENST00000498034 PIK3C2BO00750 1634 aa31.32■■■□□ 2.6
LMBR1-219ENST00000498034 LTKP29376 864 aa31.3■■■□□ 2.6
LMBR1-219ENST00000498034 ARHGAP23Q9P227 1491 aa31.29■■■□□ 2.6
LMBR1-219ENST00000498034 SLIT1O75093 1534 aa31.29■■■□□ 2.6
LMBR1-219ENST00000498034 EFCAB6Q5THR3 1501 aa31.29■■■□□ 2.6
LMBR1-219ENST00000498034 SCAF11Q99590 1463 aaKnown RBP31.28■■■□□ 2.6
LMBR1-219ENST00000498034 TXNDC2Q86VQ3 553 aa31.28■■■□□ 2.6
LMBR1-219ENST00000498034 IDI1Q13907 227 aa31.27■■■□□ 2.6
LMBR1-219ENST00000498034 SYNMO15061 1565 aa31.26■■■□□ 2.6
LMBR1-219ENST00000498034 STAG3Q9UJ98 1225 aa31.26■■■□□ 2.59
LMBR1-219ENST00000498034 NOS1P29475 1434 aa31.24■■■□□ 2.59
LMBR1-219ENST00000498034 STRCP1A6NGW2 1772 aa31.22■■■□□ 2.59
LMBR1-219ENST00000498034 EID1Q9Y6B2 187 aa31.22■■■□□ 2.59
LMBR1-219ENST00000498034 TMEM2Q9UHN6 1383 aa31.21■■■□□ 2.59
LMBR1-219ENST00000498034 ITGAEP38570 1179 aa31.21■■■□□ 2.59
LMBR1-219ENST00000498034 ROCK1Q13464 1354 aa31.19■■■□□ 2.58
LMBR1-219ENST00000498034 KDM5AP29375 1690 aaKnown RBP31.19■■■□□ 2.58
LMBR1-219ENST00000498034 TOM1O60784 492 aa31.17■■■□□ 2.58
LMBR1-219ENST00000498034 UNC13BO14795 1591 aa31.17■■■□□ 2.58
LMBR1-219ENST00000498034 TET3O43151 1660 aa31.16■■■□□ 2.58
LMBR1-219ENST00000498034 PIP4K2BP78356 416 aa31.16■■■□□ 2.58
LMBR1-219ENST00000498034 SCAF1Q9H7N4 1312 aaKnown RBP31.16■■■□□ 2.58
LMBR1-219ENST00000498034 DISP3Q9P2K9 1392 aa31.16■■■□□ 2.58
LMBR1-219ENST00000498034 RPRD2Q5VT52 1461 aaKnown RBP31.15■■■□□ 2.58
LMBR1-219ENST00000498034 SLC52A1Q9NWF4 448 aa31.15■■■□□ 2.58
LMBR1-219ENST00000498034 LRRC7Q96NW7 1537 aa31.14■■■□□ 2.57
LMBR1-219ENST00000498034 ADGRB3O60242 1522 aa31.13■■■□□ 2.57
LMBR1-219ENST00000498034 GCC2Q8IWJ2 1684 aa31.11■■■□□ 2.57
LMBR1-219ENST00000498034 ALKQ9UM73 1620 aa31.07■■■□□ 2.56
LMBR1-219ENST00000498034 E9PCH4 1651 aa31.06■■■□□ 2.56
LMBR1-219ENST00000498034 IQGAP3Q86VI3 1631 aa31.05■■■□□ 2.56
LMBR1-219ENST00000498034 HSPA1LP34931 641 aa31.04■■■□□ 2.56
LMBR1-219ENST00000498034 SLC26A8Q96RN1 970 aa31.03■■■□□ 2.56
LMBR1-219ENST00000498034 NUP155O75694 1391 aa31.03■■■□□ 2.56
LMBR1-219ENST00000498034 MYO5BQ9ULV0 1848 aa31.03■■■□□ 2.56
LMBR1-219ENST00000498034 ILDR2Q71H61 639 aa30.99■■■□□ 2.55
LMBR1-219ENST00000498034 TMEM131LA2VDJ0 1609 aa30.98■■■□□ 2.55
LMBR1-219ENST00000498034 SENP3Q9H4L4 574 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms