RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 MS4A1P11836 297 aa10.4□□□□□ -0.74
NEB-216ENST00000497809 DRC1Q96MC2 740 aa10.4□□□□□ -0.74
NEB-216ENST00000497809 NEFLP07196 543 aa10.39□□□□□ -0.75
NEB-216ENST00000497809 TXNDC2Q86VQ3 553 aa10.39□□□□□ -0.75
NEB-216ENST00000497809 CD44P16070 742 aaKnown RBP10.39□□□□□ -0.75
NEB-216ENST00000497809 SIRT1Q96EB6 747 aa10.39□□□□□ -0.75
NEB-216ENST00000497809 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
NEB-216ENST00000497809 USTQ9Y2C2 406 aa10.38□□□□□ -0.75
NEB-216ENST00000497809 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
NEB-216ENST00000497809 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
NEB-216ENST00000497809 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
NEB-216ENST00000497809 PYGBP11216 843 aa10.37□□□□□ -0.75
NEB-216ENST00000497809 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.36□□□□□ -0.75
NEB-216ENST00000497809 OXER1Q8TDS5 423 aa10.36□□□□□ -0.75
NEB-216ENST00000497809 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
NEB-216ENST00000497809 IRF6O14896 467 aa10.35□□□□□ -0.75
NEB-216ENST00000497809 CALR3Q96L12 384 aaKnown RBP10.35□□□□□ -0.75
NEB-216ENST00000497809 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
NEB-216ENST00000497809 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
NEB-216ENST00000497809 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
NEB-216ENST00000497809 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
NEB-216ENST00000497809 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
NEB-216ENST00000497809 NOL8Q76FK4 1167 aaKnown RBP10.34□□□□□ -0.75
NEB-216ENST00000497809 PBXIP1Q96AQ6 731 aa10.34□□□□□ -0.75
NEB-216ENST00000497809 TBC1D12O60347 775 aa10.34□□□□□ -0.75
NEB-216ENST00000497809 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
NEB-216ENST00000497809 POM121CA8CG34 1229 aa10.32□□□□□ -0.76
NEB-216ENST00000497809 TCF3P15923 654 aa10.32□□□□□ -0.76
NEB-216ENST00000497809 SNRKQ9NRH2 765 aa10.32□□□□□ -0.76
NEB-216ENST00000497809 MFSD10Q14728 455 aa10.32□□□□□ -0.76
NEB-216ENST00000497809 GLMNQ92990 594 aa10.32□□□□□ -0.76
NEB-216ENST00000497809 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
NEB-216ENST00000497809 MARCH6O60337 910 aa10.31□□□□□ -0.76
NEB-216ENST00000497809 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
NEB-216ENST00000497809 PROCA1Q8NCQ7 364 aaPredicted RBP10.31□□□□□ -0.76
NEB-216ENST00000497809 HIRIP3Q9BW71 556 aaPredicted RBP10.31□□□□□ -0.76
NEB-216ENST00000497809 CSB-PGBD3P0DP91 1061 aa10.3□□□□□ -0.76
NEB-216ENST00000497809 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
NEB-216ENST00000497809 LOC102724159A0A0B4J2E5 919 aa10.3□□□□□ -0.76
NEB-216ENST00000497809 RFX1P22670 979 aa10.3□□□□□ -0.76
NEB-216ENST00000497809 PWP2Q15269 919 aaKnown RBP10.3□□□□□ -0.76
NEB-216ENST00000497809 ZNF662Q6ZS27 426 aa10.3□□□□□ -0.76
NEB-216ENST00000497809 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
NEB-216ENST00000497809 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
NEB-216ENST00000497809 GIMAP6Q6P9H5 292 aa10.28□□□□□ -0.76
NEB-216ENST00000497809 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
NEB-216ENST00000497809 SRPK2P78362 688 aaKnown RBP10.28□□□□□ -0.76
NEB-216ENST00000497809 RASEFQ8IZ41 740 aa10.28□□□□□ -0.76
NEB-216ENST00000497809 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
NEB-216ENST00000497809 RIPOR2Q9Y4F9 1068 aa10.28□□□□□ -0.76
NEB-216ENST00000497809 ZNF16P17020 682 aaPredicted RBP10.27□□□□□ -0.77
NEB-216ENST00000497809 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
NEB-216ENST00000497809 GDPD2Q9HCC8 539 aa10.26□□□□□ -0.77
NEB-216ENST00000497809 FECHP22830 423 aa10.26□□□□□ -0.77
NEB-216ENST00000497809 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
NEB-216ENST00000497809 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
NEB-216ENST00000497809 DNAJC14Q6Y2X3 702 aaPredicted RBP10.25□□□□□ -0.77
NEB-216ENST00000497809 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
NEB-216ENST00000497809 DDX27Q96GQ7 796 aaKnown RBP10.25□□□□□ -0.77
NEB-216ENST00000497809 DCBLD2Q96PD2 775 aa10.25□□□□□ -0.77
NEB-216ENST00000497809 ZNF579Q8NAF0 562 aaKnown RBP10.24□□□□□ -0.77
NEB-216ENST00000497809 UBXN4Q92575 508 aa10.23□□□□□ -0.77
NEB-216ENST00000497809 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
NEB-216ENST00000497809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEB-216ENST00000497809 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
NEB-216ENST00000497809 PLEKHD1A6NEE1 506 aa10.22□□□□□ -0.77
NEB-216ENST00000497809 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
NEB-216ENST00000497809 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
NEB-216ENST00000497809 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.77
NEB-216ENST00000497809 PPME1Q9Y570 386 aa10.21□□□□□ -0.77
NEB-216ENST00000497809 PDE4AP27815 886 aa10.21□□□□□ -0.78
NEB-216ENST00000497809 MICAL1Q8TDZ2 1067 aa10.21□□□□□ -0.78
NEB-216ENST00000497809 TMEM88BA6NKF7 163 aa10.2□□□□□ -0.78
NEB-216ENST00000497809 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
NEB-216ENST00000497809 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
NEB-216ENST00000497809 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
NEB-216ENST00000497809 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
NEB-216ENST00000497809 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
NEB-216ENST00000497809 SUGT1Q9Y2Z0 365 aa10.19□□□□□ -0.78
NEB-216ENST00000497809 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
NEB-216ENST00000497809 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
NEB-216ENST00000497809 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
NEB-216ENST00000497809 EXOC8Q8IYI6 725 aa10.17□□□□□ -0.78
NEB-216ENST00000497809 ADAMTS19Q8TE59 1207 aa10.17□□□□□ -0.78
NEB-216ENST00000497809 CREBZFQ9NS37 354 aa10.17□□□□□ -0.78
NEB-216ENST00000497809 RAB11FIP3O75154 756 aa10.17□□□□□ -0.78
NEB-216ENST00000497809 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
NEB-216ENST00000497809 FGD1P98174 961 aa10.16□□□□□ -0.78
NEB-216ENST00000497809 NAALADL2Q58DX5 795 aa10.16□□□□□ -0.78
NEB-216ENST00000497809 TEX2Q8IWB9 1127 aa10.16□□□□□ -0.78
NEB-216ENST00000497809 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
NEB-216ENST00000497809 ABL2P42684 1182 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 FOSBP53539 338 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 MTMR14Q8NCE2 650 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 GNPATO15228 680 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 GIPC2Q8TF65 315 aa10.15□□□□□ -0.78
NEB-216ENST00000497809 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
NEB-216ENST00000497809 DPYSL4O14531 572 aa10.14□□□□□ -0.79
NEB-216ENST00000497809 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms