RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
PTPN3-206ENST00000497739 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
PTPN3-206ENST00000497739 MROH2AA6NES4 1674 aa15.19■□□□□ 0.02
PTPN3-206ENST00000497739 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
PTPN3-206ENST00000497739 PLXNC1O60486 1568 aa15.18■□□□□ 0.02
PTPN3-206ENST00000497739 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
PTPN3-206ENST00000497739 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
PTPN3-206ENST00000497739 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
PTPN3-206ENST00000497739 TCOF1Q13428 1488 aaKnown RBP15.15■□□□□ 0.02
PTPN3-206ENST00000497739 SYCP2Q9BX26 1530 aa15.15■□□□□ 0.02
PTPN3-206ENST00000497739 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
PTPN3-206ENST00000497739 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
PTPN3-206ENST00000497739 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
PTPN3-206ENST00000497739 ZMYM3Q14202 1370 aa15.14■□□□□ 0.01
PTPN3-206ENST00000497739 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
PTPN3-206ENST00000497739 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
PTPN3-206ENST00000497739 ZNF335Q9H4Z2 1342 aaPredicted RBP15.14■□□□□ 0.01
PTPN3-206ENST00000497739 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
PTPN3-206ENST00000497739 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
PTPN3-206ENST00000497739 PTPRKQ15262 1439 aa15.13■□□□□ 0.01
PTPN3-206ENST00000497739 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
PTPN3-206ENST00000497739 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
PTPN3-206ENST00000497739 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
PTPN3-206ENST00000497739 CEP170BQ9Y4F5 1589 aaPredicted RBP15.11■□□□□ 0.01
PTPN3-206ENST00000497739 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
PTPN3-206ENST00000497739 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
PTPN3-206ENST00000497739 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
PTPN3-206ENST00000497739 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
PTPN3-206ENST00000497739 A2MP01023 1474 aa15.08■□□□□ 0
PTPN3-206ENST00000497739 SUPT6HQ7KZ85 1726 aaKnown RBP15.07■□□□□ 0
PTPN3-206ENST00000497739 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
PTPN3-206ENST00000497739 PKD2Q13563 968 aa15.06■□□□□ 0
PTPN3-206ENST00000497739 UBAP1LF5GYI3 381 aa15.05■□□□□ -0
PTPN3-206ENST00000497739 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
PTPN3-206ENST00000497739 NEURL4Q96JN8 1562 aa15.03■□□□□ -0
PTPN3-206ENST00000497739 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
PTPN3-206ENST00000497739 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
PTPN3-206ENST00000497739 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
PTPN3-206ENST00000497739 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
PTPN3-206ENST00000497739 DNMT1P26358 1616 aaKnown RBP15.02□□□□□ -0.01
PTPN3-206ENST00000497739 MBD5Q9P267 1494 aa15.01□□□□□ -0.01
PTPN3-206ENST00000497739 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
PTPN3-206ENST00000497739 MED1Q15648 1581 aaPredicted RBP15□□□□□ -0.01
PTPN3-206ENST00000497739 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
PTPN3-206ENST00000497739 ADGBQ8N7X0 1667 aa14.98□□□□□ -0.01
PTPN3-206ENST00000497739 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
PTPN3-206ENST00000497739 TIAM1Q13009 1591 aa14.98□□□□□ -0.01
PTPN3-206ENST00000497739 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
PTPN3-206ENST00000497739 GGT6Q6P531 493 aa14.97□□□□□ -0.01
PTPN3-206ENST00000497739 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
PTPN3-206ENST00000497739 CPS1P31327 1500 aa14.97□□□□□ -0.01
PTPN3-206ENST00000497739 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.01
PTPN3-206ENST00000497739 RTEL1-TNFRSF6BF6WH68 1400 aa14.96□□□□□ -0.01
PTPN3-206ENST00000497739 HSPA1LP34931 641 aa14.96□□□□□ -0.01
PTPN3-206ENST00000497739 VWDEQ8N2E2 1590 aa14.96□□□□□ -0.01
PTPN3-206ENST00000497739 EHBP1L1Q8N3D4 1523 aa14.96□□□□□ -0.02
PTPN3-206ENST00000497739 PZPP20742 1482 aa14.95□□□□□ -0.02
PTPN3-206ENST00000497739 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
PTPN3-206ENST00000497739 FAM135AQ9P2D6 1515 aa14.94□□□□□ -0.02
PTPN3-206ENST00000497739 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
PTPN3-206ENST00000497739 TNRQ92752 1358 aa14.94□□□□□ -0.02
PTPN3-206ENST00000497739 POLR1AO95602 1720 aaPredicted RBP14.94□□□□□ -0.02
PTPN3-206ENST00000497739 KDM5DQ9BY66 1539 aa14.93□□□□□ -0.02
PTPN3-206ENST00000497739 FBXO31Q5XUX0 539 aaPredicted RBP14.93□□□□□ -0.02
PTPN3-206ENST00000497739 MED14O60244 1454 aa14.91□□□□□ -0.02
PTPN3-206ENST00000497739 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
PTPN3-206ENST00000497739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTPN3-206ENST00000497739 PIP4K2BP78356 416 aa14.88□□□□□ -0.03
PTPN3-206ENST00000497739 NLRP1Q9C000 1473 aa14.88□□□□□ -0.03
PTPN3-206ENST00000497739 MIA2Q96PC5 1412 aa14.87□□□□□ -0.03
PTPN3-206ENST00000497739 CCDC141Q6ZP82 1450 aa14.87□□□□□ -0.03
PTPN3-206ENST00000497739 NPHP4O75161 1426 aaPredicted RBP14.86□□□□□ -0.03
PTPN3-206ENST00000497739 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
PTPN3-206ENST00000497739 TOM1O60784 492 aa14.86□□□□□ -0.03
PTPN3-206ENST00000497739 SPDYE1Q8NFV5 336 aaPredicted RBP14.86□□□□□ -0.03
PTPN3-206ENST00000497739 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
PTPN3-206ENST00000497739 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
PTPN3-206ENST00000497739 LRRC7Q96NW7 1537 aa14.84□□□□□ -0.03
PTPN3-206ENST00000497739 KIF3BO15066 747 aa14.84□□□□□ -0.03
PTPN3-206ENST00000497739 STRCP1A6NGW2 1772 aa14.83□□□□□ -0.03
PTPN3-206ENST00000497739 ABCC3O15438 1527 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 MAP3K1Q13233 1512 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
PTPN3-206ENST00000497739 IQGAP1P46940 1657 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
PTPN3-206ENST00000497739 SYNMO15061 1565 aa14.81□□□□□ -0.04
PTPN3-206ENST00000497739 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
PTPN3-206ENST00000497739 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
PTPN3-206ENST00000497739 WASHC2CQ9Y4E1 1318 aa14.81□□□□□ -0.04
PTPN3-206ENST00000497739 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
PTPN3-206ENST00000497739 THEMISQ8N1K5 641 aaPredicted RBP14.8□□□□□ -0.04
PTPN3-206ENST00000497739 MROH1Q8NDA8 1641 aa14.8□□□□□ -0.04
PTPN3-206ENST00000497739 ERVK-7P63135 1459 aa14.79□□□□□ -0.04
PTPN3-206ENST00000497739 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
PTPN3-206ENST00000497739 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
PTPN3-206ENST00000497739 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
PTPN3-206ENST00000497739 RGS17Q9UGC6 210 aaPredicted RBP14.75□□□□□ -0.05
PTPN3-206ENST00000497739 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms