RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 COL17A1Q9UMD9 1497 aaPredicted RBP16.21■□□□□ 0.19
COMMD6-212ENST00000497707 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
COMMD6-212ENST00000497707 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
COMMD6-212ENST00000497707 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
COMMD6-212ENST00000497707 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
COMMD6-212ENST00000497707 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
COMMD6-212ENST00000497707 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
COMMD6-212ENST00000497707 ERBINQ96RT1 1412 aa16.15■□□□□ 0.18
COMMD6-212ENST00000497707 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
COMMD6-212ENST00000497707 NUP155O75694 1391 aa16.14■□□□□ 0.17
COMMD6-212ENST00000497707 UNC13BO14795 1591 aa16.14■□□□□ 0.17
COMMD6-212ENST00000497707 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
COMMD6-212ENST00000497707 ABCA6Q8N139 1617 aa16.13■□□□□ 0.17
COMMD6-212ENST00000497707 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
COMMD6-212ENST00000497707 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
COMMD6-212ENST00000497707 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
COMMD6-212ENST00000497707 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
COMMD6-212ENST00000497707 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
COMMD6-212ENST00000497707 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
COMMD6-212ENST00000497707 A2MP01023 1474 aa16.1■□□□□ 0.17
COMMD6-212ENST00000497707 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
COMMD6-212ENST00000497707 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
COMMD6-212ENST00000497707 ANKRD30BQ9BXX2 1392 aa16.1■□□□□ 0.17
COMMD6-212ENST00000497707 PKD2Q13563 968 aa16.09■□□□□ 0.17
COMMD6-212ENST00000497707 DEPDC5O75140 1603 aa16.08■□□□□ 0.17
COMMD6-212ENST00000497707 KIF3BO15066 747 aa16.08■□□□□ 0.16
COMMD6-212ENST00000497707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
COMMD6-212ENST00000497707 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
COMMD6-212ENST00000497707 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
COMMD6-212ENST00000497707 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
COMMD6-212ENST00000497707 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
COMMD6-212ENST00000497707 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
COMMD6-212ENST00000497707 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
COMMD6-212ENST00000497707 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
COMMD6-212ENST00000497707 ATP10AO60312 1499 aa16.03■□□□□ 0.16
COMMD6-212ENST00000497707 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.16
COMMD6-212ENST00000497707 PLA2R1Q13018 1463 aa16.02■□□□□ 0.15
COMMD6-212ENST00000497707 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
COMMD6-212ENST00000497707 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
COMMD6-212ENST00000497707 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
COMMD6-212ENST00000497707 REREQ9P2R6 1566 aa15.98■□□□□ 0.15
COMMD6-212ENST00000497707 E9PCH4 1651 aa15.98■□□□□ 0.15
COMMD6-212ENST00000497707 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
COMMD6-212ENST00000497707 GGT6Q6P531 493 aa15.97■□□□□ 0.15
COMMD6-212ENST00000497707 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
COMMD6-212ENST00000497707 LMTK2Q8IWU2 1503 aa15.96■□□□□ 0.15
COMMD6-212ENST00000497707 TET3O43151 1660 aa15.95■□□□□ 0.14
COMMD6-212ENST00000497707 AGLP35573 1532 aa15.95■□□□□ 0.14
COMMD6-212ENST00000497707 CEP152O94986 1710 aa15.95■□□□□ 0.14
COMMD6-212ENST00000497707 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
COMMD6-212ENST00000497707 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
COMMD6-212ENST00000497707 KANK1Q14678 1352 aa15.94■□□□□ 0.14
COMMD6-212ENST00000497707 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
COMMD6-212ENST00000497707 PTPRTO14522 1441 aa15.93■□□□□ 0.14
COMMD6-212ENST00000497707 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
COMMD6-212ENST00000497707 ABCC3O15438 1527 aa15.91■□□□□ 0.14
COMMD6-212ENST00000497707 TONSLQ96HA7 1378 aa15.89■□□□□ 0.13
COMMD6-212ENST00000497707 WASHC2CQ9Y4E1 1318 aa15.89■□□□□ 0.13
COMMD6-212ENST00000497707 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
COMMD6-212ENST00000497707 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
COMMD6-212ENST00000497707 NPATQ14207 1427 aa15.86■□□□□ 0.13
COMMD6-212ENST00000497707 SPHKAPQ2M3C7 1700 aa15.86■□□□□ 0.13
COMMD6-212ENST00000497707 CAMSAP1Q5T5Y3 1602 aa15.86■□□□□ 0.13
COMMD6-212ENST00000497707 NBPF8Q3BBV2 869 aa15.85■□□□□ 0.13
COMMD6-212ENST00000497707 TRPM2O94759 1503 aa15.84■□□□□ 0.13
COMMD6-212ENST00000497707 ARHGAP31Q2M1Z3 1444 aa15.84■□□□□ 0.13
COMMD6-212ENST00000497707 MLECQ14165 292 aa15.83■□□□□ 0.12
COMMD6-212ENST00000497707 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
COMMD6-212ENST00000497707 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.12
COMMD6-212ENST00000497707 CCDC144AA2RUR9 1427 aa15.82■□□□□ 0.12
COMMD6-212ENST00000497707 NOS1P29475 1434 aa15.82■□□□□ 0.12
COMMD6-212ENST00000497707 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
COMMD6-212ENST00000497707 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
COMMD6-212ENST00000497707 UGGT1Q9NYU2 1555 aa15.8■□□□□ 0.12
COMMD6-212ENST00000497707 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
COMMD6-212ENST00000497707 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
COMMD6-212ENST00000497707 SYNMO15061 1565 aa15.78■□□□□ 0.12
COMMD6-212ENST00000497707 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
COMMD6-212ENST00000497707 UHRF1BP1Q6BDS2 1440 aa15.76■□□□□ 0.11
COMMD6-212ENST00000497707 CNTLNQ9NXG0 1405 aa15.76■□□□□ 0.11
COMMD6-212ENST00000497707 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
COMMD6-212ENST00000497707 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
COMMD6-212ENST00000497707 PREX1Q8TCU6 1659 aa15.75■□□□□ 0.11
COMMD6-212ENST00000497707 PIK3C2BO00750 1634 aa15.75■□□□□ 0.11
COMMD6-212ENST00000497707 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
COMMD6-212ENST00000497707 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
COMMD6-212ENST00000497707 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
COMMD6-212ENST00000497707 IDI1Q13907 227 aa15.73■□□□□ 0.11
COMMD6-212ENST00000497707 NEURL4Q96JN8 1562 aa15.73■□□□□ 0.11
COMMD6-212ENST00000497707 KIF1BO60333 1816 aa15.73■□□□□ 0.11
COMMD6-212ENST00000497707 MROH2AA6NES4 1674 aa15.72■□□□□ 0.11
COMMD6-212ENST00000497707 ERVK-7P63135 1459 aa15.71■□□□□ 0.11
COMMD6-212ENST00000497707 SPATA31D1Q6ZQQ2 1576 aa15.7■□□□□ 0.1
COMMD6-212ENST00000497707 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
COMMD6-212ENST00000497707 SLC52A1Q9NWF4 448 aa15.68■□□□□ 0.1
COMMD6-212ENST00000497707 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
COMMD6-212ENST00000497707 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
COMMD6-212ENST00000497707 IFT172Q9UG01 1749 aa15.67■□□□□ 0.1
COMMD6-212ENST00000497707 MYO5BQ9ULV0 1848 aa15.66■□□□□ 0.1
COMMD6-212ENST00000497707 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms