RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 RTEL1-TNFRSF6BF6WH68 1400 aa30.35■■■□□ 2.45
CTSD-206ENST00000497544 NCKAP5LQ9HCH0 1330 aa30.32■■■□□ 2.44
CTSD-206ENST00000497544 ABCA6Q8N139 1617 aa30.32■■■□□ 2.44
CTSD-206ENST00000497544 ATP7AQ04656 1500 aa30.32■■■□□ 2.44
CTSD-206ENST00000497544 KIDINS220Q9ULH0 1771 aa30.31■■■□□ 2.44
CTSD-206ENST00000497544 SHANK2Q9UPX8 1470 aa30.29■■■□□ 2.44
CTSD-206ENST00000497544 CROCC2H7BZ55 1655 aa30.29■■■□□ 2.44
CTSD-206ENST00000497544 AGLP35573 1532 aa30.28■■■□□ 2.44
CTSD-206ENST00000497544 MAST1Q9Y2H9 1570 aa30.28■■■□□ 2.44
CTSD-206ENST00000497544 INO80Q9ULG1 1556 aaPredicted RBP30.27■■■□□ 2.44
CTSD-206ENST00000497544 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
CTSD-206ENST00000497544 ANKRD30AQ9BXX3 1397 aa30.25■■■□□ 2.43
CTSD-206ENST00000497544 SCAF1Q9H7N4 1312 aaKnown RBP30.24■■■□□ 2.43
CTSD-206ENST00000497544 PHF23Q9BUL5 403 aaPredicted RBP30.24■■■□□ 2.43
CTSD-206ENST00000497544 RRP7BPQ9NSQ0 103 aa30.24■■■□□ 2.43
CTSD-206ENST00000497544 ESF1Q9H501 851 aaKnown RBP30.23■■■□□ 2.43
CTSD-206ENST00000497544 ZNF142P52746 1687 aaPredicted RBP30.21■■■□□ 2.43
CTSD-206ENST00000497544 PIP4K2BP78356 416 aa30.21■■■□□ 2.43
CTSD-206ENST00000497544 MROH2AA6NES4 1674 aa30.2■■■□□ 2.43
CTSD-206ENST00000497544 NPATQ14207 1427 aa30.2■■■□□ 2.42
CTSD-206ENST00000497544 CNTLNQ9NXG0 1405 aa30.2■■■□□ 2.42
CTSD-206ENST00000497544 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
CTSD-206ENST00000497544 TRIM26Q12899 539 aaPredicted RBP30.17■■■□□ 2.42
CTSD-206ENST00000497544 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
CTSD-206ENST00000497544 MYO3AQ8NEV4 1616 aa30.16■■■□□ 2.42
CTSD-206ENST00000497544 ADGRL2O95490 1459 aa30.16■■■□□ 2.42
CTSD-206ENST00000497544 A2MP01023 1474 aa30.16■■■□□ 2.42
CTSD-206ENST00000497544 ROCK1Q13464 1354 aa30.15■■■□□ 2.42
CTSD-206ENST00000497544 KIF15Q9NS87 1388 aa30.15■■■□□ 2.42
CTSD-206ENST00000497544 PLXNC1O60486 1568 aa30.15■■■□□ 2.42
CTSD-206ENST00000497544 DHX29Q7Z478 1369 aaKnown RBP30.15■■■□□ 2.42
CTSD-206ENST00000497544 PKD2Q13563 968 aa30.13■■■□□ 2.41
CTSD-206ENST00000497544 DUOX2Q9NRD8 1548 aa30.09■■■□□ 2.41
CTSD-206ENST00000497544 CEP170BQ9Y4F5 1589 aaPredicted RBP30.09■■■□□ 2.41
CTSD-206ENST00000497544 TOM1O60784 492 aa30.08■■■□□ 2.41
CTSD-206ENST00000497544 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
CTSD-206ENST00000497544 KIF3BO15066 747 aa30.06■■■□□ 2.4
CTSD-206ENST00000497544 ZMYM3Q14202 1370 aa30.04■■■□□ 2.4
CTSD-206ENST00000497544 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
CTSD-206ENST00000497544 CPS1P31327 1500 aa30.03■■■□□ 2.4
CTSD-206ENST00000497544 ANKRD50Q9ULJ7 1429 aa30.01■■■□□ 2.39
CTSD-206ENST00000497544 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.39
CTSD-206ENST00000497544 ERBINQ96RT1 1412 aa30■■■□□ 2.39
CTSD-206ENST00000497544 GGT6Q6P531 493 aa30■■■□□ 2.39
CTSD-206ENST00000497544 HFM1A2PYH4 1435 aa29.97■■■□□ 2.39
CTSD-206ENST00000497544 NAIPQ13075 1403 aa29.97■■■□□ 2.39
CTSD-206ENST00000497544 POLR1AO95602 1720 aaPredicted RBP29.96■■■□□ 2.39
CTSD-206ENST00000497544 EIF2AK4Q9P2K8 1649 aaKnown RBP29.93■■■□□ 2.38
CTSD-206ENST00000497544 RGS17Q9UGC6 210 aaPredicted RBP29.93■■■□□ 2.38
CTSD-206ENST00000497544 NEURL4Q96JN8 1562 aa29.92■■■□□ 2.38
CTSD-206ENST00000497544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.91■■■□□ 2.38
CTSD-206ENST00000497544 GCC2Q8IWJ2 1684 aa29.91■■■□□ 2.38
CTSD-206ENST00000497544 SETD5Q9C0A6 1442 aa29.89■■■□□ 2.38
CTSD-206ENST00000497544 SENP3Q9H4L4 574 aaPredicted RBP29.85■■■□□ 2.37
CTSD-206ENST00000497544 VWDEQ8N2E2 1590 aa29.85■■■□□ 2.37
CTSD-206ENST00000497544 PCGF6Q9BYE7 350 aa29.84■■■□□ 2.37
CTSD-206ENST00000497544 A2ML1A8K2U0 1454 aa29.83■■■□□ 2.37
CTSD-206ENST00000497544 KANK1Q14678 1352 aa29.83■■■□□ 2.37
CTSD-206ENST00000497544 RNF17Q9BXT8 1623 aaKnown RBP29.82■■■□□ 2.36
CTSD-206ENST00000497544 WASHC2CQ9Y4E1 1318 aa29.82■■■□□ 2.36
CTSD-206ENST00000497544 TRIM52Q96A61 297 aa29.82■■■□□ 2.36
CTSD-206ENST00000497544 RAB3GAP2Q9H2M9 1393 aa29.78■■■□□ 2.36
CTSD-206ENST00000497544 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
CTSD-206ENST00000497544 DEPDC5O75140 1603 aa29.77■■■□□ 2.36
CTSD-206ENST00000497544 NUP155O75694 1391 aa29.77■■■□□ 2.36
CTSD-206ENST00000497544 HRCP23327 699 aa29.75■■■□□ 2.35
CTSD-206ENST00000497544 MROH1Q8NDA8 1641 aa29.74■■■□□ 2.35
CTSD-206ENST00000497544 UNC13BO14795 1591 aa29.73■■■□□ 2.35
CTSD-206ENST00000497544 PRDM15P57071 1507 aaPredicted RBP29.72■■■□□ 2.35
CTSD-206ENST00000497544 SETD1AO15047 1707 aaKnown RBP29.72■■■□□ 2.35
CTSD-206ENST00000497544 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
CTSD-206ENST00000497544 KDM5DQ9BY66 1539 aa29.7■■■□□ 2.34
CTSD-206ENST00000497544 FAM135AQ9P2D6 1515 aa29.7■■■□□ 2.34
CTSD-206ENST00000497544 POTEAQ6S8J7 498 aa29.69■■■□□ 2.34
CTSD-206ENST00000497544 ABCC3O15438 1527 aa29.66■■■□□ 2.34
CTSD-206ENST00000497544 CEP152O94986 1710 aa29.66■■■□□ 2.34
CTSD-206ENST00000497544 ZC3H13Q5T200 1668 aaKnown RBP29.66■■■□□ 2.34
CTSD-206ENST00000497544 LRRC7Q96NW7 1537 aa29.64■■■□□ 2.34
CTSD-206ENST00000497544 SLC4A1APQ9BWU0 796 aaKnown RBP29.63■■■□□ 2.33
CTSD-206ENST00000497544 SYNMO15061 1565 aa29.62■■■□□ 2.33
CTSD-206ENST00000497544 IQGAP3Q86VI3 1631 aa29.62■■■□□ 2.33
CTSD-206ENST00000497544 LMTK2Q8IWU2 1503 aa29.61■■■□□ 2.33
CTSD-206ENST00000497544 MPHOSPH9Q99550 1183 aa29.59■■■□□ 2.33
CTSD-206ENST00000497544 NPHP4O75161 1426 aaPredicted RBP29.59■■■□□ 2.33
CTSD-206ENST00000497544 MED14O60244 1454 aa29.59■■■□□ 2.33
CTSD-206ENST00000497544 IQGAP1P46940 1657 aa29.59■■■□□ 2.33
CTSD-206ENST00000497544 CFAP65Q6ZU64 1925 aaKnown RBP29.59■■■□□ 2.33
CTSD-206ENST00000497544 TET3O43151 1660 aa29.56■■■□□ 2.32
CTSD-206ENST00000497544 ANKLE2Q86XL3 938 aa29.56■■■□□ 2.32
CTSD-206ENST00000497544 TNRQ92752 1358 aa29.55■■■□□ 2.32
CTSD-206ENST00000497544 PZPP20742 1482 aa29.55■■■□□ 2.32
CTSD-206ENST00000497544 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
CTSD-206ENST00000497544 FBXO31Q5XUX0 539 aaPredicted RBP29.53■■■□□ 2.32
CTSD-206ENST00000497544 EFCAB6Q5THR3 1501 aa29.5■■■□□ 2.31
CTSD-206ENST00000497544 XIRP1Q702N8 1843 aaKnown RBP29.48■■■□□ 2.31
CTSD-206ENST00000497544 RPRD2Q5VT52 1461 aaKnown RBP29.47■■■□□ 2.31
CTSD-206ENST00000497544 UGGT1Q9NYU2 1555 aa29.46■■■□□ 2.31
CTSD-206ENST00000497544 E9PCH4 1651 aa29.46■■■□□ 2.31
CTSD-206ENST00000497544 FOXD1Q16676 465 aa29.43■■■□□ 2.3
CTSD-206ENST00000497544 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms