RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-219ENST00000497483 SHANK2Q9UPX8 1470 aa38.88■■■■□ 3.81
HDAC10-219ENST00000497483 KIF3BO15066 747 aa38.88■■■■□ 3.81
HDAC10-219ENST00000497483 TCOF1Q13428 1488 aaKnown RBP38.86■■■■□ 3.81
HDAC10-219ENST00000497483 FGD6Q6ZV73 1430 aa38.85■■■■□ 3.81
HDAC10-219ENST00000497483 DNMT1P26358 1616 aaKnown RBP38.83■■■■□ 3.81
HDAC10-219ENST00000497483 CEP170BQ9Y4F5 1589 aaPredicted RBP38.82■■■■□ 3.81
HDAC10-219ENST00000497483 NCOA1Q15788 1441 aa38.81■■■■□ 3.8
HDAC10-219ENST00000497483 ZC3H13Q5T200 1668 aaKnown RBP38.81■■■■□ 3.8
HDAC10-219ENST00000497483 DMRT2Q9Y5R5 561 aa38.8■■■■□ 3.8
HDAC10-219ENST00000497483 PZPP20742 1482 aa38.79■■■■□ 3.8
HDAC10-219ENST00000497483 DUOX2Q9NRD8 1548 aa38.79■■■■□ 3.8
HDAC10-219ENST00000497483 CAMSAP1Q5T5Y3 1602 aa38.78■■■■□ 3.8
HDAC10-219ENST00000497483 PTPRTO14522 1441 aa38.77■■■■□ 3.8
HDAC10-219ENST00000497483 ABCC5O15440 1437 aa38.77■■■■□ 3.8
HDAC10-219ENST00000497483 MROH1Q8NDA8 1641 aa38.75■■■■□ 3.79
HDAC10-219ENST00000497483 FBXO41Q8TF61 875 aa38.75■■■■□ 3.79
HDAC10-219ENST00000497483 DAPK1P53355 1430 aa38.74■■■■□ 3.79
HDAC10-219ENST00000497483 PLA2R1Q13018 1463 aa38.72■■■■□ 3.79
HDAC10-219ENST00000497483 WASHC2CQ9Y4E1 1318 aa38.7■■■■□ 3.79
HDAC10-219ENST00000497483 ABCC3O15438 1527 aa38.69■■■■□ 3.78
HDAC10-219ENST00000497483 A2ML1A8K2U0 1454 aa38.68■■■■□ 3.78
HDAC10-219ENST00000497483 KIF15Q9NS87 1388 aa38.67■■■■□ 3.78
HDAC10-219ENST00000497483 ERBINQ96RT1 1412 aa38.66■■■■□ 3.78
HDAC10-219ENST00000497483 PRDM15P57071 1507 aaPredicted RBP38.63■■■■□ 3.78
HDAC10-219ENST00000497483 CEP152O94986 1710 aa38.63■■■■□ 3.78
HDAC10-219ENST00000497483 TNRQ92752 1358 aa38.63■■■■□ 3.77
HDAC10-219ENST00000497483 DEPDC5O75140 1603 aa38.6■■■■□ 3.77
HDAC10-219ENST00000497483 CERKQ8TCT0 537 aa38.59■■■■□ 3.77
HDAC10-219ENST00000497483 FBXO31Q5XUX0 539 aaPredicted RBP38.57■■■■□ 3.76
HDAC10-219ENST00000497483 SPATA31D1Q6ZQQ2 1576 aa38.57■■■■□ 3.76
HDAC10-219ENST00000497483 NLRP1Q9C000 1473 aa38.55■■■■□ 3.76
HDAC10-219ENST00000497483 ADGRL2O95490 1459 aa38.54■■■■□ 3.76
HDAC10-219ENST00000497483 ANKRD30AQ9BXX3 1397 aa38.53■■■■□ 3.76
HDAC10-219ENST00000497483 POLR1AO95602 1720 aaPredicted RBP38.52■■■■□ 3.76
HDAC10-219ENST00000497483 PKD2Q13563 968 aa38.51■■■■□ 3.76
HDAC10-219ENST00000497483 LTBP4Q8N2S1 1624 aa38.5■■■■□ 3.75
HDAC10-219ENST00000497483 RRP7BPQ9NSQ0 103 aa38.5■■■■□ 3.75
HDAC10-219ENST00000497483 ERVK-7P63135 1459 aa38.48■■■■□ 3.75
HDAC10-219ENST00000497483 NCKAP5LQ9HCH0 1330 aa38.46■■■■□ 3.75
HDAC10-219ENST00000497483 ARHGAP31Q2M1Z3 1444 aa38.44■■■■□ 3.74
HDAC10-219ENST00000497483 UGGT1Q9NYU2 1555 aa38.44■■■■□ 3.74
HDAC10-219ENST00000497483 VWDEQ8N2E2 1590 aa38.41■■■■□ 3.74
HDAC10-219ENST00000497483 NEURL4Q96JN8 1562 aa38.41■■■■□ 3.74
HDAC10-219ENST00000497483 CHIC2Q9UKJ5 165 aa38.4■■■■□ 3.74
HDAC10-219ENST00000497483 CFAP65Q6ZU64 1925 aaKnown RBP38.39■■■■□ 3.74
HDAC10-219ENST00000497483 LMTK2Q8IWU2 1503 aa38.38■■■■□ 3.74
HDAC10-219ENST00000497483 FAM50AQ14320 339 aaKnown RBP38.38■■■■□ 3.73
HDAC10-219ENST00000497483 IQSEC2Q5JU85 1478 aa38.38■■■■□ 3.73
HDAC10-219ENST00000497483 KANK1Q14678 1352 aa38.34■■■■□ 3.73
HDAC10-219ENST00000497483 UBR1Q8IWV7 1749 aa38.32■■■■□ 3.72
HDAC10-219ENST00000497483 THEMISQ8N1K5 641 aaPredicted RBP38.31■■■■□ 3.72
HDAC10-219ENST00000497483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.3■■■■□ 3.72
HDAC10-219ENST00000497483 ANKRD50Q9ULJ7 1429 aa38.27■■■■□ 3.72
HDAC10-219ENST00000497483 MED14O60244 1454 aa38.27■■■■□ 3.72
HDAC10-219ENST00000497483 EFCAB6Q5THR3 1501 aa38.26■■■■□ 3.72
HDAC10-219ENST00000497483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.25■■■■□ 3.71
HDAC10-219ENST00000497483 ZNF335Q9H4Z2 1342 aaPredicted RBP38.25■■■■□ 3.71
HDAC10-219ENST00000497483 ANKLE2Q86XL3 938 aa38.22■■■■□ 3.71
HDAC10-219ENST00000497483 IQGAP1P46940 1657 aa38.2■■■■□ 3.71
HDAC10-219ENST00000497483 KDM5AP29375 1690 aaKnown RBP38.2■■■■□ 3.71
HDAC10-219ENST00000497483 ROCK1Q13464 1354 aa38.19■■■■□ 3.7
HDAC10-219ENST00000497483 UNC13BO14795 1591 aa38.19■■■■□ 3.7
HDAC10-219ENST00000497483 PIK3C2BO00750 1634 aa38.17■■■■□ 3.7
HDAC10-219ENST00000497483 NPHP4O75161 1426 aaPredicted RBP38.16■■■■□ 3.7
HDAC10-219ENST00000497483 TET3O43151 1660 aa38.14■■■■□ 3.7
HDAC10-219ENST00000497483 SLIT1O75093 1534 aa38.14■■■■□ 3.7
HDAC10-219ENST00000497483 SYNMO15061 1565 aa38.14■■■■□ 3.7
HDAC10-219ENST00000497483 ARHGAP23Q9P227 1491 aa38.13■■■■□ 3.69
HDAC10-219ENST00000497483 CPS1P31327 1500 aa38.12■■■■□ 3.69
HDAC10-219ENST00000497483 GCC2Q8IWJ2 1684 aa38.11■■■■□ 3.69
HDAC10-219ENST00000497483 RPRD2Q5VT52 1461 aaKnown RBP38.11■■■■□ 3.69
HDAC10-219ENST00000497483 NOS1P29475 1434 aa38.11■■■■□ 3.69
HDAC10-219ENST00000497483 SCAF11Q99590 1463 aaKnown RBP38.07■■■■□ 3.68
HDAC10-219ENST00000497483 PPARGC1BQ86YN6 1023 aaKnown RBP38.03■■■■□ 3.68
HDAC10-219ENST00000497483 IQGAP3Q86VI3 1631 aa38.02■■■■□ 3.68
HDAC10-219ENST00000497483 RRBP1Q9P2E9 1410 aaKnown RBP38.01■■■■□ 3.68
HDAC10-219ENST00000497483 ADGRB3O60242 1522 aa38■■■■□ 3.67
HDAC10-219ENST00000497483 TMEM2Q9UHN6 1383 aa37.95■■■■□ 3.67
HDAC10-219ENST00000497483 E9PCH4 1651 aa37.95■■■■□ 3.67
HDAC10-219ENST00000497483 STRCP1A6NGW2 1772 aa37.95■■■■□ 3.67
HDAC10-219ENST00000497483 IDI1Q13907 227 aa37.94■■■■□ 3.66
HDAC10-219ENST00000497483 SLC52A1Q9NWF4 448 aa37.91■■■■□ 3.66
HDAC10-219ENST00000497483 LTKP29376 864 aa37.9■■■■□ 3.66
HDAC10-219ENST00000497483 ITGAEP38570 1179 aa37.89■■■■□ 3.66
HDAC10-219ENST00000497483 TXNDC2Q86VQ3 553 aa37.88■■■■□ 3.65
HDAC10-219ENST00000497483 STAG3Q9UJ98 1225 aa37.88■■■■□ 3.65
HDAC10-219ENST00000497483 EID1Q9Y6B2 187 aa37.87■■■■□ 3.65
HDAC10-219ENST00000497483 MYO5BQ9ULV0 1848 aa37.86■■■■□ 3.65
HDAC10-219ENST00000497483 UBAP1LF5GYI3 381 aa37.84■■■■□ 3.65
HDAC10-219ENST00000497483 TMEM131LA2VDJ0 1609 aa37.82■■■■□ 3.64
HDAC10-219ENST00000497483 NUP155O75694 1391 aa37.79■■■■□ 3.64
HDAC10-219ENST00000497483 LRRC7Q96NW7 1537 aa37.78■■■■□ 3.64
HDAC10-219ENST00000497483 ZFYVE9O95405 1425 aa37.73■■■■□ 3.63
HDAC10-219ENST00000497483 NAIPQ13075 1403 aa37.71■■■■□ 3.63
HDAC10-219ENST00000497483 SPHKAPQ2M3C7 1700 aa37.71■■■■□ 3.63
HDAC10-219ENST00000497483 ALKQ9UM73 1620 aa37.71■■■■□ 3.63
HDAC10-219ENST00000497483 XIRP1Q702N8 1843 aaKnown RBP37.69■■■■□ 3.62
HDAC10-219ENST00000497483 TOM1O60784 492 aa37.68■■■■□ 3.62
HDAC10-219ENST00000497483 NWD1Q149M9 1564 aa37.64■■■■□ 3.62
HDAC10-219ENST00000497483 RIMS2Q9UQ26 1411 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms