RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 DEPDC5O75140 1603 aa29.45■■■□□ 2.3
SCAMP3-209ENST00000497470 KIF3BO15066 747 aa29.43■■■□□ 2.3
SCAMP3-209ENST00000497470 UNC13BO14795 1591 aa29.42■■■□□ 2.3
SCAMP3-209ENST00000497470 PRDM15P57071 1507 aaPredicted RBP29.4■■■□□ 2.3
SCAMP3-209ENST00000497470 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
SCAMP3-209ENST00000497470 VWDEQ8N2E2 1590 aa29.37■■■□□ 2.29
SCAMP3-209ENST00000497470 KANK1Q14678 1352 aa29.36■■■□□ 2.29
SCAMP3-209ENST00000497470 SIGLEC1Q9BZZ2 1709 aa29.35■■■□□ 2.29
SCAMP3-209ENST00000497470 MROH1Q8NDA8 1641 aa29.34■■■□□ 2.29
SCAMP3-209ENST00000497470 LMTK2Q8IWU2 1503 aa29.32■■■□□ 2.28
SCAMP3-209ENST00000497470 ARID4BQ4LE39 1312 aaPredicted RBP29.3■■■□□ 2.28
SCAMP3-209ENST00000497470 CNTLNQ9NXG0 1405 aa29.29■■■□□ 2.28
SCAMP3-209ENST00000497470 NUP155O75694 1391 aa29.29■■■□□ 2.28
SCAMP3-209ENST00000497470 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
SCAMP3-209ENST00000497470 IQGAP3Q86VI3 1631 aa29.29■■■□□ 2.28
SCAMP3-209ENST00000497470 GGT6Q6P531 493 aa29.28■■■□□ 2.28
SCAMP3-209ENST00000497470 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
SCAMP3-209ENST00000497470 WASHC2CQ9Y4E1 1318 aa29.22■■■□□ 2.27
SCAMP3-209ENST00000497470 ABCC3O15438 1527 aa29.22■■■□□ 2.27
SCAMP3-209ENST00000497470 TRIM52Q96A61 297 aa29.22■■■□□ 2.27
SCAMP3-209ENST00000497470 PZPP20742 1482 aa29.21■■■□□ 2.27
SCAMP3-209ENST00000497470 ADAMTSL3P82987 1691 aa29.2■■■□□ 2.26
SCAMP3-209ENST00000497470 RPRD2Q5VT52 1461 aaKnown RBP29.19■■■□□ 2.26
SCAMP3-209ENST00000497470 TET3O43151 1660 aa29.18■■■□□ 2.26
SCAMP3-209ENST00000497470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.18■■■□□ 2.26
SCAMP3-209ENST00000497470 MPHOSPH9Q99550 1183 aa29.17■■■□□ 2.26
SCAMP3-209ENST00000497470 ESF1Q9H501 851 aaKnown RBP29.17■■■□□ 2.26
SCAMP3-209ENST00000497470 MROH2AA6NES4 1674 aa29.17■■■□□ 2.26
SCAMP3-209ENST00000497470 SLC4A1APQ9BWU0 796 aaKnown RBP29.15■■■□□ 2.26
SCAMP3-209ENST00000497470 EFCAB6Q5THR3 1501 aa29.14■■■□□ 2.25
SCAMP3-209ENST00000497470 MLECQ14165 292 aa29.12■■■□□ 2.25
SCAMP3-209ENST00000497470 CAMSAP1Q5T5Y3 1602 aa29.09■■■□□ 2.25
SCAMP3-209ENST00000497470 ZMYM3Q14202 1370 aa29.09■■■□□ 2.25
SCAMP3-209ENST00000497470 FER1L4A9Z1Z3 1794 aa29.08■■■□□ 2.25
SCAMP3-209ENST00000497470 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
SCAMP3-209ENST00000497470 DHX57Q6P158 1386 aaKnown RBP29.08■■■□□ 2.25
SCAMP3-209ENST00000497470 CEP152O94986 1710 aa29.08■■■□□ 2.25
SCAMP3-209ENST00000497470 CLTCQ00610 1675 aaKnown RBP29.06■■■□□ 2.24
SCAMP3-209ENST00000497470 NPATQ14207 1427 aa29.06■■■□□ 2.24
SCAMP3-209ENST00000497470 PKD2Q13563 968 aa29.05■■■□□ 2.24
SCAMP3-209ENST00000497470 MADDQ8WXG6 1647 aa29.04■■■□□ 2.24
SCAMP3-209ENST00000497470 PTPRTO14522 1441 aa29.03■■■□□ 2.24
SCAMP3-209ENST00000497470 E9PCH4 1651 aa29.02■■■□□ 2.24
SCAMP3-209ENST00000497470 NOS1P29475 1434 aa29.01■■■□□ 2.23
SCAMP3-209ENST00000497470 SPATA31D1Q6ZQQ2 1576 aa28.97■■■□□ 2.23
SCAMP3-209ENST00000497470 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
SCAMP3-209ENST00000497470 RIMS1Q86UR5 1692 aaKnown RBP28.94■■■□□ 2.22
SCAMP3-209ENST00000497470 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
SCAMP3-209ENST00000497470 C3P01024 1663 aa28.93■■■□□ 2.22
SCAMP3-209ENST00000497470 PTPRMP28827 1452 aa28.93■■■□□ 2.22
SCAMP3-209ENST00000497470 KDM4FA0A1W2PPD8 638 aa28.93■■■□□ 2.22
SCAMP3-209ENST00000497470 SLC52A1Q9NWF4 448 aa28.92■■■□□ 2.22
SCAMP3-209ENST00000497470 TRPM2O94759 1503 aa28.92■■■□□ 2.22
SCAMP3-209ENST00000497470 PREX1Q8TCU6 1659 aa28.91■■■□□ 2.22
SCAMP3-209ENST00000497470 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
SCAMP3-209ENST00000497470 SPHKAPQ2M3C7 1700 aa28.89■■■□□ 2.22
SCAMP3-209ENST00000497470 SETD1BQ9UPS6 1966 aaKnown RBP28.88■■■□□ 2.21
SCAMP3-209ENST00000497470 TNRQ92752 1358 aa28.84■■■□□ 2.21
SCAMP3-209ENST00000497470 NLRP1Q9C000 1473 aa28.84■■■□□ 2.21
SCAMP3-209ENST00000497470 NEURL4Q96JN8 1562 aa28.84■■■□□ 2.21
SCAMP3-209ENST00000497470 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
SCAMP3-209ENST00000497470 PIK3C2BO00750 1634 aa28.83■■■□□ 2.21
SCAMP3-209ENST00000497470 CCDC144AA2RUR9 1427 aa28.82■■■□□ 2.2
SCAMP3-209ENST00000497470 SYNMO15061 1565 aa28.82■■■□□ 2.2
SCAMP3-209ENST00000497470 FOXD1Q16676 465 aa28.81■■■□□ 2.2
SCAMP3-209ENST00000497470 CCER1Q8TC90 406 aaPredicted RBP28.81■■■□□ 2.2
SCAMP3-209ENST00000497470 CEBPAP49715 358 aaPredicted RBP28.79■■■□□ 2.2
SCAMP3-209ENST00000497470 KDM5AP29375 1690 aaKnown RBP28.77■■■□□ 2.2
SCAMP3-209ENST00000497470 TIMELESSQ9UNS1 1208 aa28.75■■■□□ 2.19
SCAMP3-209ENST00000497470 IDI1Q13907 227 aa28.74■■■□□ 2.19
SCAMP3-209ENST00000497470 CFAP65Q6ZU64 1925 aaKnown RBP28.74■■■□□ 2.19
SCAMP3-209ENST00000497470 CLTCL1P53675 1640 aa28.72■■■□□ 2.19
SCAMP3-209ENST00000497470 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
SCAMP3-209ENST00000497470 A2ML1A8K2U0 1454 aa28.7■■■□□ 2.18
SCAMP3-209ENST00000497470 SPATA31E1Q6ZUB1 1445 aa28.69■■■□□ 2.18
SCAMP3-209ENST00000497470 ZNF142P52746 1687 aaPredicted RBP28.66■■■□□ 2.18
SCAMP3-209ENST00000497470 UHRF1BP1Q6BDS2 1440 aa28.66■■■□□ 2.18
SCAMP3-209ENST00000497470 MYO3AQ8NEV4 1616 aa28.65■■■□□ 2.18
SCAMP3-209ENST00000497470 KIF1BO60333 1816 aa28.65■■■□□ 2.18
SCAMP3-209ENST00000497470 RPGRIP1LQ68CZ1 1315 aa28.65■■■□□ 2.18
SCAMP3-209ENST00000497470 ADGRB3O60242 1522 aa28.64■■■□□ 2.18
SCAMP3-209ENST00000497470 TMEM131LA2VDJ0 1609 aa28.64■■■□□ 2.18
SCAMP3-209ENST00000497470 UGGT1Q9NYU2 1555 aa28.63■■■□□ 2.17
SCAMP3-209ENST00000497470 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
SCAMP3-209ENST00000497470 THEMISQ8N1K5 641 aaPredicted RBP28.61■■■□□ 2.17
SCAMP3-209ENST00000497470 SIN3AQ96ST3 1273 aa28.6■■■□□ 2.17
SCAMP3-209ENST00000497470 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
SCAMP3-209ENST00000497470 HDGFP51858 240 aaKnown RBP28.57■■■□□ 2.16
SCAMP3-209ENST00000497470 STAG3Q9UJ98 1225 aa28.56■■■□□ 2.16
SCAMP3-209ENST00000497470 SLIT1O75093 1534 aa28.55■■■□□ 2.16
SCAMP3-209ENST00000497470 ZFYVE9O95405 1425 aa28.55■■■□□ 2.16
SCAMP3-209ENST00000497470 ARHGAP23Q9P227 1491 aa28.54■■■□□ 2.16
SCAMP3-209ENST00000497470 TMEM2Q9UHN6 1383 aa28.52■■■□□ 2.16
SCAMP3-209ENST00000497470 PLPPR3Q6T4P5 718 aa28.52■■■□□ 2.16
SCAMP3-209ENST00000497470 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
SCAMP3-209ENST00000497470 TONSLQ96HA7 1378 aa28.51■■■□□ 2.16
SCAMP3-209ENST00000497470 NEUROD1Q13562 356 aa28.51■■■□□ 2.15
SCAMP3-209ENST00000497470 VGFO15240 615 aaPredicted RBP28.48■■■□□ 2.15
SCAMP3-209ENST00000497470 CHGAP10645 457 aaKnown RBP28.48■■■□□ 2.15
SCAMP3-209ENST00000497470 MYOM2P54296 1465 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms