RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
TOM1-217ENST00000497448 SYNMO15061 1565 aa17.36■□□□□ 0.37
TOM1-217ENST00000497448 DEPDC5O75140 1603 aa17.36■□□□□ 0.37
TOM1-217ENST00000497448 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
TOM1-217ENST00000497448 TNRQ92752 1358 aa17.35■□□□□ 0.37
TOM1-217ENST00000497448 MED14O60244 1454 aa17.33■□□□□ 0.37
TOM1-217ENST00000497448 PZPP20742 1482 aa17.33■□□□□ 0.37
TOM1-217ENST00000497448 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
TOM1-217ENST00000497448 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
TOM1-217ENST00000497448 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
TOM1-217ENST00000497448 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
TOM1-217ENST00000497448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.31■□□□□ 0.36
TOM1-217ENST00000497448 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
TOM1-217ENST00000497448 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
TOM1-217ENST00000497448 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
TOM1-217ENST00000497448 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
TOM1-217ENST00000497448 FBXO31Q5XUX0 539 aaPredicted RBP17.28■□□□□ 0.36
TOM1-217ENST00000497448 NLRP1Q9C000 1473 aa17.28■□□□□ 0.36
TOM1-217ENST00000497448 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
TOM1-217ENST00000497448 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
TOM1-217ENST00000497448 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
TOM1-217ENST00000497448 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
TOM1-217ENST00000497448 CCNB3Q8WWL7 1395 aa17.25■□□□□ 0.35
TOM1-217ENST00000497448 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
TOM1-217ENST00000497448 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
TOM1-217ENST00000497448 XIRP1Q702N8 1843 aaKnown RBP17.24■□□□□ 0.35
TOM1-217ENST00000497448 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
TOM1-217ENST00000497448 DHX29Q7Z478 1369 aaKnown RBP17.23■□□□□ 0.35
TOM1-217ENST00000497448 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
TOM1-217ENST00000497448 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
TOM1-217ENST00000497448 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
TOM1-217ENST00000497448 KIF3BO15066 747 aa17.18■□□□□ 0.34
TOM1-217ENST00000497448 UBR1Q8IWV7 1749 aa17.16■□□□□ 0.34
TOM1-217ENST00000497448 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
TOM1-217ENST00000497448 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
TOM1-217ENST00000497448 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
TOM1-217ENST00000497448 EHBP1L1Q8N3D4 1523 aa17.15■□□□□ 0.34
TOM1-217ENST00000497448 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
TOM1-217ENST00000497448 ABCC3O15438 1527 aa17.13■□□□□ 0.33
TOM1-217ENST00000497448 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
TOM1-217ENST00000497448 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
TOM1-217ENST00000497448 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
TOM1-217ENST00000497448 CAMSAP2Q08AD1 1489 aa17.11■□□□□ 0.33
TOM1-217ENST00000497448 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
TOM1-217ENST00000497448 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
TOM1-217ENST00000497448 CEP152O94986 1710 aa17.09■□□□□ 0.33
TOM1-217ENST00000497448 SLIT1O75093 1534 aa17.08■□□□□ 0.32
TOM1-217ENST00000497448 ARHGAP23Q9P227 1491 aa17.08■□□□□ 0.32
TOM1-217ENST00000497448 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
TOM1-217ENST00000497448 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
TOM1-217ENST00000497448 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
TOM1-217ENST00000497448 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
TOM1-217ENST00000497448 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
TOM1-217ENST00000497448 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
TOM1-217ENST00000497448 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
TOM1-217ENST00000497448 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
TOM1-217ENST00000497448 LTKP29376 864 aa17.01■□□□□ 0.31
TOM1-217ENST00000497448 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
TOM1-217ENST00000497448 TMEM94Q12767 1356 aa17■□□□□ 0.31
TOM1-217ENST00000497448 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
TOM1-217ENST00000497448 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
TOM1-217ENST00000497448 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
TOM1-217ENST00000497448 TXNDC2Q86VQ3 553 aa16.97■□□□□ 0.31
TOM1-217ENST00000497448 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
TOM1-217ENST00000497448 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.3
TOM1-217ENST00000497448 PRDM15P57071 1507 aaPredicted RBP16.95■□□□□ 0.3
TOM1-217ENST00000497448 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
TOM1-217ENST00000497448 LRP6O75581 1613 aa16.94■□□□□ 0.3
TOM1-217ENST00000497448 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
TOM1-217ENST00000497448 JCADQ9P266 1359 aa16.93■□□□□ 0.3
TOM1-217ENST00000497448 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.3
TOM1-217ENST00000497448 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
TOM1-217ENST00000497448 TET3O43151 1660 aa16.92■□□□□ 0.3
TOM1-217ENST00000497448 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
TOM1-217ENST00000497448 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
TOM1-217ENST00000497448 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
TOM1-217ENST00000497448 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
TOM1-217ENST00000497448 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
TOM1-217ENST00000497448 RBM33Q96EV2 1170 aaKnown RBP16.9■□□□□ 0.3
TOM1-217ENST00000497448 KCNA6P17658 529 aa16.89■□□□□ 0.29
TOM1-217ENST00000497448 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
TOM1-217ENST00000497448 MSH6P52701 1360 aa16.88■□□□□ 0.29
TOM1-217ENST00000497448 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
TOM1-217ENST00000497448 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
TOM1-217ENST00000497448 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
TOM1-217ENST00000497448 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
TOM1-217ENST00000497448 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
TOM1-217ENST00000497448 SLC26A8Q96RN1 970 aa16.84■□□□□ 0.29
TOM1-217ENST00000497448 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
TOM1-217ENST00000497448 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.28
TOM1-217ENST00000497448 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
TOM1-217ENST00000497448 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
TOM1-217ENST00000497448 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
TOM1-217ENST00000497448 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
TOM1-217ENST00000497448 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
TOM1-217ENST00000497448 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
TOM1-217ENST00000497448 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
TOM1-217ENST00000497448 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
TOM1-217ENST00000497448 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
TOM1-217ENST00000497448 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms