RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 KIAA1107Q9UPP5 1409 aa15.7■□□□□ 0.1
SCNM1-206ENST00000497147 TNRQ92752 1358 aa15.7■□□□□ 0.1
SCNM1-206ENST00000497147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCNM1-206ENST00000497147 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
SCNM1-206ENST00000497147 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
SCNM1-206ENST00000497147 NPHP4O75161 1426 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-206ENST00000497147 MED14O60244 1454 aa15.66■□□□□ 0.1
SCNM1-206ENST00000497147 LRRC7Q96NW7 1537 aa15.66■□□□□ 0.1
SCNM1-206ENST00000497147 CFDP1Q9UEE9 299 aaPredicted RBP15.65■□□□□ 0.1
SCNM1-206ENST00000497147 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
SCNM1-206ENST00000497147 STRCP1A6NGW2 1772 aa15.64■□□□□ 0.09
SCNM1-206ENST00000497147 PZPP20742 1482 aa15.64■□□□□ 0.09
SCNM1-206ENST00000497147 PLEKHH2Q8IVE3 1493 aa15.64■□□□□ 0.09
SCNM1-206ENST00000497147 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
SCNM1-206ENST00000497147 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
SCNM1-206ENST00000497147 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
SCNM1-206ENST00000497147 DEPDC5O75140 1603 aa15.62■□□□□ 0.09
SCNM1-206ENST00000497147 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
SCNM1-206ENST00000497147 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
SCNM1-206ENST00000497147 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
SCNM1-206ENST00000497147 UGGT1Q9NYU2 1555 aa15.6■□□□□ 0.09
SCNM1-206ENST00000497147 RNF17Q9BXT8 1623 aaKnown RBP15.6■□□□□ 0.09
SCNM1-206ENST00000497147 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
SCNM1-206ENST00000497147 MBD5Q9P267 1494 aa15.59■□□□□ 0.09
SCNM1-206ENST00000497147 KIF3BO15066 747 aa15.59■□□□□ 0.09
SCNM1-206ENST00000497147 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
SCNM1-206ENST00000497147 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
SCNM1-206ENST00000497147 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.09
SCNM1-206ENST00000497147 IQGAP1P46940 1657 aa15.58■□□□□ 0.08
SCNM1-206ENST00000497147 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
SCNM1-206ENST00000497147 FAM135AQ9P2D6 1515 aa15.58■□□□□ 0.08
SCNM1-206ENST00000497147 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
SCNM1-206ENST00000497147 SYNMO15061 1565 aa15.56■□□□□ 0.08
SCNM1-206ENST00000497147 ZC3H13Q5T200 1668 aaKnown RBP15.51■□□□□ 0.07
SCNM1-206ENST00000497147 FAM135BQ49AJ0 1406 aa15.5■□□□□ 0.07
SCNM1-206ENST00000497147 TIAM1Q13009 1591 aa15.49■□□□□ 0.07
SCNM1-206ENST00000497147 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
SCNM1-206ENST00000497147 LTKP29376 864 aa15.48■□□□□ 0.07
SCNM1-206ENST00000497147 SRCAPQ6ZRS2 3230 aa15.48■□□□□ 0.07
SCNM1-206ENST00000497147 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
SCNM1-206ENST00000497147 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
SCNM1-206ENST00000497147 NCOA2Q15596 1464 aa15.45■□□□□ 0.06
SCNM1-206ENST00000497147 CCDC141Q6ZP82 1450 aa15.45■□□□□ 0.06
SCNM1-206ENST00000497147 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
SCNM1-206ENST00000497147 ERVK-7P63135 1459 aa15.44■□□□□ 0.06
SCNM1-206ENST00000497147 ABCC3O15438 1527 aa15.43■□□□□ 0.06
SCNM1-206ENST00000497147 ARHGAP23Q9P227 1491 aa15.42■□□□□ 0.06
SCNM1-206ENST00000497147 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
SCNM1-206ENST00000497147 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
SCNM1-206ENST00000497147 TMEM94Q12767 1356 aa15.41■□□□□ 0.06
SCNM1-206ENST00000497147 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCNM1-206ENST00000497147 SLIT1O75093 1534 aa15.4■□□□□ 0.06
SCNM1-206ENST00000497147 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
SCNM1-206ENST00000497147 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
SCNM1-206ENST00000497147 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
SCNM1-206ENST00000497147 CAMSAP2Q08AD1 1489 aa15.4■□□□□ 0.06
SCNM1-206ENST00000497147 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
SCNM1-206ENST00000497147 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
SCNM1-206ENST00000497147 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
SCNM1-206ENST00000497147 MROH1Q8NDA8 1641 aa15.35■□□□□ 0.05
SCNM1-206ENST00000497147 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
SCNM1-206ENST00000497147 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
SCNM1-206ENST00000497147 KCNA6P17658 529 aa15.34■□□□□ 0.05
SCNM1-206ENST00000497147 EID1Q9Y6B2 187 aa15.34■□□□□ 0.05
SCNM1-206ENST00000497147 ARHGEF5Q12774 1597 aa15.33■□□□□ 0.05
SCNM1-206ENST00000497147 PROSER2Q86WR7 435 aaPredicted RBP15.33■□□□□ 0.04
SCNM1-206ENST00000497147 JCADQ9P266 1359 aa15.33■□□□□ 0.04
SCNM1-206ENST00000497147 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
SCNM1-206ENST00000497147 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
SCNM1-206ENST00000497147 SLAIN2Q9P270 581 aa15.32■□□□□ 0.04
SCNM1-206ENST00000497147 LRP6O75581 1613 aa15.32■□□□□ 0.04
SCNM1-206ENST00000497147 SLC26A8Q96RN1 970 aa15.31■□□□□ 0.04
SCNM1-206ENST00000497147 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
SCNM1-206ENST00000497147 CEP152O94986 1710 aa15.3■□□□□ 0.04
SCNM1-206ENST00000497147 PRDM15P57071 1507 aaPredicted RBP15.3■□□□□ 0.04
SCNM1-206ENST00000497147 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
SCNM1-206ENST00000497147 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
SCNM1-206ENST00000497147 TET3O43151 1660 aa15.29■□□□□ 0.04
SCNM1-206ENST00000497147 APLP2Q06481 763 aa15.29■□□□□ 0.04
SCNM1-206ENST00000497147 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
SCNM1-206ENST00000497147 ARHGAP31Q2M1Z3 1444 aa15.28■□□□□ 0.04
SCNM1-206ENST00000497147 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
SCNM1-206ENST00000497147 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.04
SCNM1-206ENST00000497147 COL16A1Q07092 1604 aaPredicted RBP15.27■□□□□ 0.03
SCNM1-206ENST00000497147 MAST1Q9Y2H9 1570 aa15.27■□□□□ 0.03
SCNM1-206ENST00000497147 MSH6P52701 1360 aa15.26■□□□□ 0.03
SCNM1-206ENST00000497147 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
SCNM1-206ENST00000497147 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
SCNM1-206ENST00000497147 SPATA31A6Q5VVP1 1343 aa15.24■□□□□ 0.03
SCNM1-206ENST00000497147 IDI1Q13907 227 aa15.24■□□□□ 0.03
SCNM1-206ENST00000497147 MEX3CQ5U5Q3 659 aaKnown RBP15.24■□□□□ 0.03
SCNM1-206ENST00000497147 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
SCNM1-206ENST00000497147 RXRBP28702 533 aa15.23■□□□□ 0.03
SCNM1-206ENST00000497147 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
SCNM1-206ENST00000497147 FGD6Q6ZV73 1430 aa15.22■□□□□ 0.03
SCNM1-206ENST00000497147 DUOX2Q9NRD8 1548 aa15.2■□□□□ 0.02
SCNM1-206ENST00000497147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCNM1-206ENST00000497147 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
SCNM1-206ENST00000497147 KDM5AP29375 1690 aaKnown RBP15.19■□□□□ 0.02
SCNM1-206ENST00000497147 KIF15Q9NS87 1388 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms