RNA–Protein interactions for RNA: ENST00000497065.1

SPEG-223, Transcript of SPEG complex locus, human

TSL 4

Gene SPEG, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPEG-223	ENST00000497065	PTPRK	Q15262	1439 aa		28.09	■■■□□ 2.09
SPEG-223	ENST00000497065	RNF17	Q9BXT8	1623 aa	Known RBP	28.08	■■■□□ 2.09
SPEG-223	ENST00000497065	FAM50A	Q14320	339 aa	Known RBP	28.08	■■■□□ 2.09
SPEG-223	ENST00000497065	KIF15	Q9NS87	1388 aa		28.08	■■■□□ 2.09
SPEG-223	ENST00000497065	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.07	■■■□□ 2.08
SPEG-223	ENST00000497065	CHIC2	Q9UKJ5	165 aa		28.06	■■■□□ 2.08
SPEG-223	ENST00000497065	DUOX2	Q9NRD8	1548 aa		28.06	■■■□□ 2.08
SPEG-223	ENST00000497065	STRC	Q7RTU9	1775 aa		28.06	■■■□□ 2.08
SPEG-223	ENST00000497065	RRP7BP	Q9NSQ0	103 aa		28.05	■■■□□ 2.08
SPEG-223	ENST00000497065	PPP6R1	Q9UPN7	881 aa		28.05	■■■□□ 2.08
SPEG-223	ENST00000497065	WASHC2C	Q9Y4E1	1318 aa		28.05	■■■□□ 2.08
SPEG-223	ENST00000497065	MROH1	Q8NDA8	1641 aa		28.03	■■■□□ 2.08
SPEG-223	ENST00000497065	FAM135A	Q9P2D6	1515 aa		28.02	■■■□□ 2.08
SPEG-223	ENST00000497065	CEP152	O94986	1710 aa		28.01	■■■□□ 2.07
SPEG-223	ENST00000497065	ZNF142	P52746	1687 aa	Predicted RBP	28	■■■□□ 2.07
SPEG-223	ENST00000497065	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28	■■■□□ 2.07
SPEG-223	ENST00000497065	ABCC3	O15438	1527 aa		28	■■■□□ 2.07
SPEG-223	ENST00000497065	FBXO31	Q5XUX0	539 aa	Predicted RBP	27.99	■■■□□ 2.07
SPEG-223	ENST00000497065	PZP	P20742	1482 aa		27.98	■■■□□ 2.07
SPEG-223	ENST00000497065	ILDR1	Q86SU0	546 aa	Predicted RBP	27.98	■■■□□ 2.07
SPEG-223	ENST00000497065	CAMSAP1	Q5T5Y3	1602 aa		27.98	■■■□□ 2.07
SPEG-223	ENST00000497065	ZC3H13	Q5T200	1668 aa	Known RBP	27.97	■■■□□ 2.07
SPEG-223	ENST00000497065	ERBIN	Q96RT1	1412 aa		27.96	■■■□□ 2.07
SPEG-223	ENST00000497065	ANKRD30A	Q9BXX3	1397 aa		27.96	■■■□□ 2.07
SPEG-223	ENST00000497065	TNR	Q92752	1358 aa		27.95	■■■□□ 2.06
SPEG-223	ENST00000497065	NCOA1	Q15788	1441 aa		27.94	■■■□□ 2.06
SPEG-223	ENST00000497065	PRDM15	P57071	1507 aa	Predicted RBP	27.92	■■■□□ 2.06
SPEG-223	ENST00000497065	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
SPEG-223	ENST00000497065	A2ML1	A8K2U0	1454 aa		27.89	■■■□□ 2.05
SPEG-223	ENST00000497065	CFAP65	Q6ZU64	1925 aa	Known RBP	27.88	■■■□□ 2.05
SPEG-223	ENST00000497065	DEPDC5	O75140	1603 aa		27.88	■■■□□ 2.05
SPEG-223	ENST00000497065	ADGRL2	O95490	1459 aa		27.88	■■■□□ 2.05
SPEG-223	ENST00000497065	NCKAP5L	Q9HCH0	1330 aa		27.86	■■■□□ 2.05
SPEG-223	ENST00000497065	DMRT2	Q9Y5R5	561 aa		27.84	■■■□□ 2.05
SPEG-223	ENST00000497065	ERVK-7	P63135	1459 aa		27.83	■■■□□ 2.05
SPEG-223	ENST00000497065	ITGAE	P38570	1179 aa		27.83	■■■□□ 2.05
SPEG-223	ENST00000497065	PTPRT	O14522	1441 aa		27.82	■■■□□ 2.04
SPEG-223	ENST00000497065	SPATA31D1	Q6ZQQ2	1576 aa		27.82	■■■□□ 2.04
SPEG-223	ENST00000497065	PLA2R1	Q13018	1463 aa		27.81	■■■□□ 2.04
SPEG-223	ENST00000497065	KANK1	Q14678	1352 aa		27.79	■■■□□ 2.04
SPEG-223	ENST00000497065	NLRP1	Q9C000	1473 aa		27.77	■■■□□ 2.04
SPEG-223	ENST00000497065	ANKRD50	Q9ULJ7	1429 aa		27.76	■■■□□ 2.04
SPEG-223	ENST00000497065	UGGT1	Q9NYU2	1555 aa		27.76	■■■□□ 2.03
SPEG-223	ENST00000497065	POLR1A	O95602	1720 aa	Predicted RBP	27.75	■■■□□ 2.03
SPEG-223	ENST00000497065	CERK	Q8TCT0	537 aa		27.74	■■■□□ 2.03
SPEG-223	ENST00000497065	FBXO41	Q8TF61	875 aa		27.73	■■■□□ 2.03
SPEG-223	ENST00000497065	VWDE	Q8N2E2	1590 aa		27.73	■■■□□ 2.03
SPEG-223	ENST00000497065	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
SPEG-223	ENST00000497065	PKD2	Q13563	968 aa		27.7	■■■□□ 2.02
SPEG-223	ENST00000497065	NEURL4	Q96JN8	1562 aa		27.69	■■■□□ 2.02
SPEG-223	ENST00000497065	ARHGAP31	Q2M1Z3	1444 aa		27.69	■■■□□ 2.02
SPEG-223	ENST00000497065	EFCAB6	Q5THR3	1501 aa		27.68	■■■□□ 2.02
SPEG-223	ENST00000497065	LMTK2	Q8IWU2	1503 aa		27.68	■■■□□ 2.02
SPEG-223	ENST00000497065	ROCK1	Q13464	1354 aa		27.66	■■■□□ 2.02
SPEG-223	ENST00000497065	LTBP4	Q8N2S1	1624 aa		27.66	■■■□□ 2.02
SPEG-223	ENST00000497065	UNC13B	O14795	1591 aa		27.65	■■■□□ 2.02
SPEG-223	ENST00000497065	UBR1	Q8IWV7	1749 aa		27.65	■■■□□ 2.02
SPEG-223	ENST00000497065	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	27.65	■■■□□ 2.02
SPEG-223	ENST00000497065	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.64	■■■□□ 2.02
SPEG-223	ENST00000497065	RRBP1	Q9P2E9	1410 aa	Known RBP	27.63	■■■□□ 2.01
SPEG-223	ENST00000497065	PIK3C2B	O00750	1634 aa		27.63	■■■□□ 2.01
SPEG-223	ENST00000497065	SYNM	O15061	1565 aa		27.61	■■■□□ 2.01
SPEG-223	ENST00000497065	TET3	O43151	1660 aa		27.6	■■■□□ 2.01
SPEG-223	ENST00000497065	ANKLE2	Q86XL3	938 aa		27.59	■■■□□ 2.01
SPEG-223	ENST00000497065	GCC2	Q8IWJ2	1684 aa		27.56	■■■□□ 2
SPEG-223	ENST00000497065	NPHP4	O75161	1426 aa	Predicted RBP	27.56	■■■□□ 2
SPEG-223	ENST00000497065	IQGAP1	P46940	1657 aa		27.56	■■■□□ 2
SPEG-223	ENST00000497065	STAG3	Q9UJ98	1225 aa		27.53	■■■□□ 2
SPEG-223	ENST00000497065	IQGAP3	Q86VI3	1631 aa		27.52	■■■□□ 2
SPEG-223	ENST00000497065	NOS1	P29475	1434 aa		27.52	■■■□□ 2
SPEG-223	ENST00000497065		E9PCH4	1651 aa		27.51	■■□□□ 1.99
SPEG-223	ENST00000497065	RPRD2	Q5VT52	1461 aa	Known RBP	27.5	■■□□□ 1.99
SPEG-223	ENST00000497065	SCAF11	Q99590	1463 aa	Known RBP	27.5	■■□□□ 1.99
SPEG-223	ENST00000497065	NUP155	O75694	1391 aa		27.49	■■□□□ 1.99
SPEG-223	ENST00000497065	IDI1	Q13907	227 aa		27.49	■■□□□ 1.99
SPEG-223	ENST00000497065	MED14	O60244	1454 aa		27.49	■■□□□ 1.99
SPEG-223	ENST00000497065	ADGRB3	O60242	1522 aa		27.48	■■□□□ 1.99
SPEG-223	ENST00000497065	SLIT1	O75093	1534 aa		27.47	■■□□□ 1.99
SPEG-223	ENST00000497065	ARHGAP23	Q9P227	1491 aa		27.46	■■□□□ 1.99
SPEG-223	ENST00000497065	MYO5B	Q9ULV0	1848 aa		27.44	■■□□□ 1.98
SPEG-223	ENST00000497065	LTK	P29376	864 aa		27.44	■■□□□ 1.98
SPEG-223	ENST00000497065	TXNDC2	Q86VQ3	553 aa		27.44	■■□□□ 1.98
SPEG-223	ENST00000497065	TMEM2	Q9UHN6	1383 aa		27.43	■■□□□ 1.98
SPEG-223	ENST00000497065	KDM5A	P29375	1690 aa	Known RBP	27.43	■■□□□ 1.98
SPEG-223	ENST00000497065	NAIP	Q13075	1403 aa		27.42	■■□□□ 1.98
SPEG-223	ENST00000497065	IQSEC2	Q5JU85	1478 aa		27.42	■■□□□ 1.98
SPEG-223	ENST00000497065	EID1	Q9Y6B2	187 aa		27.4	■■□□□ 1.98
SPEG-223	ENST00000497065	SENP3	Q9H4L4	574 aa	Predicted RBP	27.39	■■□□□ 1.98
SPEG-223	ENST00000497065	STRCP1	A6NGW2	1772 aa		27.38	■■□□□ 1.97
SPEG-223	ENST00000497065	CPS1	P31327	1500 aa		27.38	■■□□□ 1.97
SPEG-223	ENST00000497065	SLC52A1	Q9NWF4	448 aa		27.37	■■□□□ 1.97
SPEG-223	ENST00000497065	CHGA	P10645	457 aa	Known RBP	27.36	■■□□□ 1.97
SPEG-223	ENST00000497065	TMEM131L	A2VDJ0	1609 aa		27.34	■■□□□ 1.97
SPEG-223	ENST00000497065	HFM1	A2PYH4	1435 aa		27.34	■■□□□ 1.97
SPEG-223	ENST00000497065	UBAP1L	F5GYI3	381 aa		27.33	■■□□□ 1.97
SPEG-223	ENST00000497065	SPHKAP	Q2M3C7	1700 aa		27.33	■■□□□ 1.96
SPEG-223	ENST00000497065	TRIM52	Q96A61	297 aa		27.29	■■□□□ 1.96
SPEG-223	ENST00000497065	RIMS2	Q9UQ26	1411 aa		27.27	■■□□□ 1.96
SPEG-223	ENST00000497065	BCAN	Q96GW7	911 aa		27.27	■■□□□ 1.96
SPEG-223	ENST00000497065	SLC26A8	Q96RN1	970 aa		27.26	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms