RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 KIF3BO15066 747 aa13.08□□□□□ -0.32
SF1-219ENST00000496969 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
SF1-219ENST00000496969 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
SF1-219ENST00000496969 ZNF142P52746 1687 aaPredicted RBP13.07□□□□□ -0.32
SF1-219ENST00000496969 DAPK1P53355 1430 aa13.06□□□□□ -0.32
SF1-219ENST00000496969 ABCC5O15440 1437 aa13.05□□□□□ -0.32
SF1-219ENST00000496969 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
SF1-219ENST00000496969 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
SF1-219ENST00000496969 WASHC2CQ9Y4E1 1318 aa13.03□□□□□ -0.32
SF1-219ENST00000496969 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
SF1-219ENST00000496969 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
SF1-219ENST00000496969 PZPP20742 1482 aa13.03□□□□□ -0.32
SF1-219ENST00000496969 STRCQ7RTU9 1775 aa13.02□□□□□ -0.32
SF1-219ENST00000496969 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
SF1-219ENST00000496969 CEP152O94986 1710 aa13.02□□□□□ -0.33
SF1-219ENST00000496969 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
SF1-219ENST00000496969 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
SF1-219ENST00000496969 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
SF1-219ENST00000496969 ABCC3O15438 1527 aa13□□□□□ -0.33
SF1-219ENST00000496969 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
SF1-219ENST00000496969 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
SF1-219ENST00000496969 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
SF1-219ENST00000496969 NCOA1Q15788 1441 aa12.98□□□□□ -0.33
SF1-219ENST00000496969 TNRQ92752 1358 aa12.98□□□□□ -0.33
SF1-219ENST00000496969 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
SF1-219ENST00000496969 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
SF1-219ENST00000496969 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
SF1-219ENST00000496969 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
SF1-219ENST00000496969 PTPRTO14522 1441 aa12.96□□□□□ -0.33
SF1-219ENST00000496969 KANK1Q14678 1352 aa12.96□□□□□ -0.33
SF1-219ENST00000496969 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
SF1-219ENST00000496969 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.34
SF1-219ENST00000496969 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
SF1-219ENST00000496969 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
SF1-219ENST00000496969 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
SF1-219ENST00000496969 ERVK-7P63135 1459 aa12.93□□□□□ -0.34
SF1-219ENST00000496969 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
SF1-219ENST00000496969 UGGT1Q9NYU2 1555 aa12.92□□□□□ -0.34
SF1-219ENST00000496969 PKD2Q13563 968 aa12.91□□□□□ -0.34
SF1-219ENST00000496969 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
SF1-219ENST00000496969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.349e-13■■□□□ 14.5
SF1-219ENST00000496969 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
SF1-219ENST00000496969 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
SF1-219ENST00000496969 ANKRD50Q9ULJ7 1429 aa12.89□□□□□ -0.35
SF1-219ENST00000496969 CERKQ8TCT0 537 aa12.89□□□□□ -0.35
SF1-219ENST00000496969 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
SF1-219ENST00000496969 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
SF1-219ENST00000496969 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
SF1-219ENST00000496969 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
SF1-219ENST00000496969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
SF1-219ENST00000496969 UNC13BO14795 1591 aa12.88□□□□□ -0.35
SF1-219ENST00000496969 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
SF1-219ENST00000496969 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
SF1-219ENST00000496969 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
SF1-219ENST00000496969 UBR1Q8IWV7 1749 aa12.87□□□□□ -0.35
SF1-219ENST00000496969 TET3O43151 1660 aa12.86□□□□□ -0.35
SF1-219ENST00000496969 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
SF1-219ENST00000496969 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
SF1-219ENST00000496969 ITGAEP38570 1179 aa12.85□□□□□ -0.35
SF1-219ENST00000496969 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
SF1-219ENST00000496969 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
SF1-219ENST00000496969 IQGAP1P46940 1657 aa12.84□□□□□ -0.35
SF1-219ENST00000496969 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
SF1-219ENST00000496969 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
SF1-219ENST00000496969 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.35
SF1-219ENST00000496969 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
SF1-219ENST00000496969 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.36
SF1-219ENST00000496969 IQGAP3Q86VI3 1631 aa12.82□□□□□ -0.36
SF1-219ENST00000496969 SYNMO15061 1565 aa12.81□□□□□ -0.36
SF1-219ENST00000496969 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
SF1-219ENST00000496969 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
SF1-219ENST00000496969 MED14O60244 1454 aa12.8□□□□□ -0.36
SF1-219ENST00000496969 ADGRB3O60242 1522 aa12.8□□□□□ -0.36
SF1-219ENST00000496969 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
SF1-219ENST00000496969 SLIT1O75093 1534 aa12.79□□□□□ -0.36
SF1-219ENST00000496969 CPS1P31327 1500 aa12.79□□□□□ -0.36
SF1-219ENST00000496969 NOS1P29475 1434 aa12.79□□□□□ -0.36
SF1-219ENST00000496969 SCAF11Q99590 1463 aaKnown RBP12.78□□□□□ -0.36
SF1-219ENST00000496969 E9PCH4 1651 aa12.78□□□□□ -0.36
SF1-219ENST00000496969 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.37
SF1-219ENST00000496969 EID1Q9Y6B2 187 aa12.76□□□□□ -0.37
SF1-219ENST00000496969 NUP155O75694 1391 aa12.74□□□□□ -0.37
SF1-219ENST00000496969 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
SF1-219ENST00000496969 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
SF1-219ENST00000496969 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
SF1-219ENST00000496969 SPHKAPQ2M3C7 1700 aa12.73□□□□□ -0.37
SF1-219ENST00000496969 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
SF1-219ENST00000496969 IDI1Q13907 227 aa12.72□□□□□ -0.37
SF1-219ENST00000496969 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
SF1-219ENST00000496969 NAIPQ13075 1403 aa12.71□□□□□ -0.38
SF1-219ENST00000496969 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
SF1-219ENST00000496969 UBAP1LF5GYI3 381 aa12.69□□□□□ -0.38
SF1-219ENST00000496969 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
SF1-219ENST00000496969 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
SF1-219ENST00000496969 LTKP29376 864 aa12.68□□□□□ -0.38
SF1-219ENST00000496969 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
SF1-219ENST00000496969 HDGFP51858 240 aaKnown RBP12.67□□□□□ -0.38
SF1-219ENST00000496969 BCANQ96GW7 911 aa12.67□□□□□ -0.38
SF1-219ENST00000496969 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
SF1-219ENST00000496969 TRPM2O94759 1503 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms