RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
CDHR3-214ENST00000496633 PREX1Q8TCU6 1659 aa11.61□□□□□ -0.55
CDHR3-214ENST00000496633 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
CDHR3-214ENST00000496633 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
CDHR3-214ENST00000496633 C3P01024 1663 aa11.6□□□□□ -0.55
CDHR3-214ENST00000496633 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
CDHR3-214ENST00000496633 KANK1Q14678 1352 aa11.59□□□□□ -0.55
CDHR3-214ENST00000496633 ADGRL2O95490 1459 aa11.58□□□□□ -0.56
CDHR3-214ENST00000496633 LMTK3Q96Q04 1460 aa11.58□□□□□ -0.56
CDHR3-214ENST00000496633 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
CDHR3-214ENST00000496633 DMRT2Q9Y5R5 561 aa11.58□□□□□ -0.56
CDHR3-214ENST00000496633 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
CDHR3-214ENST00000496633 CLTCQ00610 1675 aaKnown RBP11.58□□□□□ -0.56
CDHR3-214ENST00000496633 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
CDHR3-214ENST00000496633 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
CDHR3-214ENST00000496633 CEBPAP49715 358 aaPredicted RBP11.55□□□□□ -0.56
CDHR3-214ENST00000496633 PZPP20742 1482 aa11.55□□□□□ -0.56
CDHR3-214ENST00000496633 PRDM15P57071 1507 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-214ENST00000496633 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
CDHR3-214ENST00000496633 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
CDHR3-214ENST00000496633 RRBP1Q9P2E9 1410 aaKnown RBP11.52□□□□□ -0.56
CDHR3-214ENST00000496633 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.56
CDHR3-214ENST00000496633 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.57
CDHR3-214ENST00000496633 DEPDC5O75140 1603 aa11.52□□□□□ -0.57
CDHR3-214ENST00000496633 ARHGAP31Q2M1Z3 1444 aa11.52□□□□□ -0.57
CDHR3-214ENST00000496633 NLRP1Q9C000 1473 aa11.51□□□□□ -0.57
CDHR3-214ENST00000496633 ABCC3O15438 1527 aa11.5□□□□□ -0.57
CDHR3-214ENST00000496633 ZNF142P52746 1687 aaPredicted RBP11.49□□□□□ -0.57
CDHR3-214ENST00000496633 PKD2Q13563 968 aa11.49□□□□□ -0.57
CDHR3-214ENST00000496633 SENP3Q9H4L4 574 aaPredicted RBP11.49□□□□□ -0.57
CDHR3-214ENST00000496633 TNRQ92752 1358 aa11.49□□□□□ -0.57
CDHR3-214ENST00000496633 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
CDHR3-214ENST00000496633 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
CDHR3-214ENST00000496633 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
CDHR3-214ENST00000496633 PLA2R1Q13018 1463 aa11.48□□□□□ -0.57
CDHR3-214ENST00000496633 CEP170BQ9Y4F5 1589 aaPredicted RBP11.48□□□□□ -0.57
CDHR3-214ENST00000496633 MROH1Q8NDA8 1641 aa11.48□□□□□ -0.57
CDHR3-214ENST00000496633 MYO3AQ8NEV4 1616 aa11.48□□□□□ -0.57
CDHR3-214ENST00000496633 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
CDHR3-214ENST00000496633 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
CDHR3-214ENST00000496633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDHR3-214ENST00000496633 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.57
CDHR3-214ENST00000496633 HSPA2P54652 639 aa11.46□□□□□ -0.57
CDHR3-214ENST00000496633 PPARGC1BQ86YN6 1023 aaKnown RBP11.46□□□□□ -0.57
CDHR3-214ENST00000496633 PTPRTO14522 1441 aa11.45□□□□□ -0.58
CDHR3-214ENST00000496633 ITGAEP38570 1179 aa11.45□□□□□ -0.58
CDHR3-214ENST00000496633 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
CDHR3-214ENST00000496633 CEP152O94986 1710 aa11.44□□□□□ -0.58
CDHR3-214ENST00000496633 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
CDHR3-214ENST00000496633 UNC13BO14795 1591 aa11.43□□□□□ -0.58
CDHR3-214ENST00000496633 SLC52A1Q9NWF4 448 aa11.43□□□□□ -0.58
CDHR3-214ENST00000496633 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
CDHR3-214ENST00000496633 EFCAB6Q5THR3 1501 aa11.42□□□□□ -0.58
CDHR3-214ENST00000496633 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
CDHR3-214ENST00000496633 ANKLE2Q86XL3 938 aa11.42□□□□□ -0.58
CDHR3-214ENST00000496633 TET3O43151 1660 aa11.41□□□□□ -0.58
CDHR3-214ENST00000496633 KDM5AP29375 1690 aaKnown RBP11.41□□□□□ -0.58
CDHR3-214ENST00000496633 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
CDHR3-214ENST00000496633 KCNA4P22459 653 aa11.4□□□□□ -0.58
CDHR3-214ENST00000496633 HDGFP51858 240 aaKnown RBP11.4□□□□□ -0.58
CDHR3-214ENST00000496633 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
CDHR3-214ENST00000496633 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
CDHR3-214ENST00000496633 NUP155O75694 1391 aa11.4□□□□□ -0.59
CDHR3-214ENST00000496633 IQGAP3Q86VI3 1631 aa11.39□□□□□ -0.59
CDHR3-214ENST00000496633 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
CDHR3-214ENST00000496633 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
CDHR3-214ENST00000496633 NOS1P29475 1434 aa11.37□□□□□ -0.59
CDHR3-214ENST00000496633 NAIPQ13075 1403 aa11.37□□□□□ -0.59
CDHR3-214ENST00000496633 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-214ENST00000496633 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
CDHR3-214ENST00000496633 MED14O60244 1454 aa11.35□□□□□ -0.59
CDHR3-214ENST00000496633 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
CDHR3-214ENST00000496633 IQSEC2Q5JU85 1478 aa11.34□□□□□ -0.59
CDHR3-214ENST00000496633 SLIT1O75093 1534 aa11.34□□□□□ -0.59
CDHR3-214ENST00000496633 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
CDHR3-214ENST00000496633 IDI1Q13907 227 aa11.33□□□□□ -0.6
CDHR3-214ENST00000496633 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
CDHR3-214ENST00000496633 TMEM2Q9UHN6 1383 aa11.32□□□□□ -0.6
CDHR3-214ENST00000496633 ADGRB3O60242 1522 aa11.32□□□□□ -0.6
CDHR3-214ENST00000496633 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDHR3-214ENST00000496633 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
CDHR3-214ENST00000496633 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
CDHR3-214ENST00000496633 NPHP4O75161 1426 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-214ENST00000496633 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
CDHR3-214ENST00000496633 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
CDHR3-214ENST00000496633 E9PCH4 1651 aa11.31□□□□□ -0.6
CDHR3-214ENST00000496633 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
CDHR3-214ENST00000496633 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
CDHR3-214ENST00000496633 SYNMO15061 1565 aa11.31□□□□□ -0.6
CDHR3-214ENST00000496633 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
CDHR3-214ENST00000496633 CPS1P31327 1500 aa11.3□□□□□ -0.6
CDHR3-214ENST00000496633 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
CDHR3-214ENST00000496633 HRCP23327 699 aa11.29□□□□□ -0.6
CDHR3-214ENST00000496633 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
CDHR3-214ENST00000496633 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
CDHR3-214ENST00000496633 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
CDHR3-214ENST00000496633 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
CDHR3-214ENST00000496633 PPP1R15AO75807 674 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-214ENST00000496633 TRPM2O94759 1503 aa11.25□□□□□ -0.61
CDHR3-214ENST00000496633 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms