RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
SMARCD3-215ENST00000496530 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
SMARCD3-215ENST00000496530 C3P01024 1663 aa12.37□□□□□ -0.43
SMARCD3-215ENST00000496530 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
SMARCD3-215ENST00000496530 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
SMARCD3-215ENST00000496530 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
SMARCD3-215ENST00000496530 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
SMARCD3-215ENST00000496530 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
SMARCD3-215ENST00000496530 MSH5O43196 834 aa12.34□□□□□ -0.43
SMARCD3-215ENST00000496530 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
SMARCD3-215ENST00000496530 ADGRL2O95490 1459 aa12.34□□□□□ -0.43
SMARCD3-215ENST00000496530 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.43
SMARCD3-215ENST00000496530 KANK1Q14678 1352 aa12.33□□□□□ -0.44
SMARCD3-215ENST00000496530 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
SMARCD3-215ENST00000496530 NPATQ14207 1427 aa12.32□□□□□ -0.44
SMARCD3-215ENST00000496530 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
SMARCD3-215ENST00000496530 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
SMARCD3-215ENST00000496530 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
SMARCD3-215ENST00000496530 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
SMARCD3-215ENST00000496530 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
SMARCD3-215ENST00000496530 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
SMARCD3-215ENST00000496530 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
SMARCD3-215ENST00000496530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCD3-215ENST00000496530 PZPP20742 1482 aa12.27□□□□□ -0.44
SMARCD3-215ENST00000496530 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
SMARCD3-215ENST00000496530 CEP152O94986 1710 aa12.27□□□□□ -0.45
SMARCD3-215ENST00000496530 ABCC3O15438 1527 aa12.27□□□□□ -0.45
SMARCD3-215ENST00000496530 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
SMARCD3-215ENST00000496530 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
SMARCD3-215ENST00000496530 MROH1Q8NDA8 1641 aa12.25□□□□□ -0.45
SMARCD3-215ENST00000496530 MYO3AQ8NEV4 1616 aa12.25□□□□□ -0.45
SMARCD3-215ENST00000496530 HSPA2P54652 639 aa12.24□□□□□ -0.45
SMARCD3-215ENST00000496530 TNRQ92752 1358 aa12.24□□□□□ -0.45
SMARCD3-215ENST00000496530 ZNF142P52746 1687 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-215ENST00000496530 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
SMARCD3-215ENST00000496530 CEP170BQ9Y4F5 1589 aaPredicted RBP12.22□□□□□ -0.45
SMARCD3-215ENST00000496530 ARHGAP31Q2M1Z3 1444 aa12.21□□□□□ -0.45
SMARCD3-215ENST00000496530 SPATA31D1Q6ZQQ2 1576 aa12.21□□□□□ -0.46
SMARCD3-215ENST00000496530 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.46
SMARCD3-215ENST00000496530 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
SMARCD3-215ENST00000496530 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
SMARCD3-215ENST00000496530 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
SMARCD3-215ENST00000496530 UNC13BO14795 1591 aa12.2□□□□□ -0.46
SMARCD3-215ENST00000496530 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
SMARCD3-215ENST00000496530 VWDEQ8N2E2 1590 aa12.19□□□□□ -0.46
SMARCD3-215ENST00000496530 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
SMARCD3-215ENST00000496530 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
SMARCD3-215ENST00000496530 TET3O43151 1660 aa12.18□□□□□ -0.46
SMARCD3-215ENST00000496530 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
SMARCD3-215ENST00000496530 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 PKD2Q13563 968 aa12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 NUP155O75694 1391 aa12.17□□□□□ -0.46
SMARCD3-215ENST00000496530 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
SMARCD3-215ENST00000496530 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
SMARCD3-215ENST00000496530 IQGAP3Q86VI3 1631 aa12.16□□□□□ -0.46
SMARCD3-215ENST00000496530 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
SMARCD3-215ENST00000496530 NAIPQ13075 1403 aa12.14□□□□□ -0.47
SMARCD3-215ENST00000496530 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
SMARCD3-215ENST00000496530 PTPRTO14522 1441 aa12.13□□□□□ -0.47
SMARCD3-215ENST00000496530 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
SMARCD3-215ENST00000496530 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
SMARCD3-215ENST00000496530 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
SMARCD3-215ENST00000496530 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
SMARCD3-215ENST00000496530 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
SMARCD3-215ENST00000496530 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-215ENST00000496530 UBR1Q8IWV7 1749 aa12.1□□□□□ -0.47
SMARCD3-215ENST00000496530 NOS1P29475 1434 aa12.1□□□□□ -0.47
SMARCD3-215ENST00000496530 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
SMARCD3-215ENST00000496530 E9PCH4 1651 aa12.1□□□□□ -0.47
SMARCD3-215ENST00000496530 PIK3C2BO00750 1634 aa12.09□□□□□ -0.47
SMARCD3-215ENST00000496530 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
SMARCD3-215ENST00000496530 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
SMARCD3-215ENST00000496530 SYNMO15061 1565 aa12.08□□□□□ -0.48
SMARCD3-215ENST00000496530 IDI1Q13907 227 aa12.07□□□□□ -0.48
SMARCD3-215ENST00000496530 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
SMARCD3-215ENST00000496530 SETD5Q9C0A6 1442 aa12.06□□□□□ -0.48
SMARCD3-215ENST00000496530 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
SMARCD3-215ENST00000496530 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
SMARCD3-215ENST00000496530 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
SMARCD3-215ENST00000496530 SLIT1O75093 1534 aa12.05□□□□□ -0.48
SMARCD3-215ENST00000496530 NPHP4O75161 1426 aaPredicted RBP12.04□□□□□ -0.48
SMARCD3-215ENST00000496530 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
SMARCD3-215ENST00000496530 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
SMARCD3-215ENST00000496530 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
SMARCD3-215ENST00000496530 TMEM2Q9UHN6 1383 aa12.04□□□□□ -0.48
SMARCD3-215ENST00000496530 MED14O60244 1454 aa12.03□□□□□ -0.48
SMARCD3-215ENST00000496530 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.48
SMARCD3-215ENST00000496530 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.49
SMARCD3-215ENST00000496530 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.49
SMARCD3-215ENST00000496530 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCD3-215ENST00000496530 BCANQ96GW7 911 aa12.02□□□□□ -0.49
SMARCD3-215ENST00000496530 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms