RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
NPDC1-206ENST00000496498 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
NPDC1-206ENST00000496498 NCOA1Q15788 1441 aa27.65■■■□□ 2.02
NPDC1-206ENST00000496498 SETD1BQ9UPS6 1966 aaKnown RBP27.64■■■□□ 2.02
NPDC1-206ENST00000496498 ZC3H13Q5T200 1668 aaKnown RBP27.64■■■□□ 2.02
NPDC1-206ENST00000496498 RRBP1Q9P2E9 1410 aaKnown RBP27.63■■■□□ 2.01
NPDC1-206ENST00000496498 ZMYM3Q14202 1370 aa27.62■■■□□ 2.01
NPDC1-206ENST00000496498 NPATQ14207 1427 aa27.62■■■□□ 2.01
NPDC1-206ENST00000496498 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
NPDC1-206ENST00000496498 LMTK3Q96Q04 1460 aa27.62■■■□□ 2.01
NPDC1-206ENST00000496498 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
NPDC1-206ENST00000496498 CEBPAP49715 358 aaPredicted RBP27.6■■■□□ 2.01
NPDC1-206ENST00000496498 CHIC2Q9UKJ5 165 aa27.59■■■□□ 2.01
NPDC1-206ENST00000496498 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
NPDC1-206ENST00000496498 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
NPDC1-206ENST00000496498 DEPDC5O75140 1603 aa27.57■■■□□ 2
NPDC1-206ENST00000496498 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
NPDC1-206ENST00000496498 WASHC2CQ9Y4E1 1318 aa27.56■■■□□ 2
NPDC1-206ENST00000496498 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
NPDC1-206ENST00000496498 PTPRKQ15262 1439 aa27.53■■■□□ 2
NPDC1-206ENST00000496498 ABCC3O15438 1527 aa27.52■■■□□ 2
NPDC1-206ENST00000496498 PZPP20742 1482 aa27.51■■■□□ 2
NPDC1-206ENST00000496498 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
NPDC1-206ENST00000496498 KANK1Q14678 1352 aa27.48■■□□□ 1.99
NPDC1-206ENST00000496498 CEP152O94986 1710 aa27.47■■□□□ 1.99
NPDC1-206ENST00000496498 CAMSAP1Q5T5Y3 1602 aa27.46■■□□□ 1.99
NPDC1-206ENST00000496498 MYO3AQ8NEV4 1616 aa27.45■■□□□ 1.98
NPDC1-206ENST00000496498 ZNF142P52746 1687 aaPredicted RBP27.44■■□□□ 1.98
NPDC1-206ENST00000496498 VWDEQ8N2E2 1590 aa27.43■■□□□ 1.98
NPDC1-206ENST00000496498 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
NPDC1-206ENST00000496498 ITGAEP38570 1179 aa27.41■■□□□ 1.98
NPDC1-206ENST00000496498 ARHGAP31Q2M1Z3 1444 aa27.41■■□□□ 1.98
NPDC1-206ENST00000496498 UNC13BO14795 1591 aa27.39■■□□□ 1.97
NPDC1-206ENST00000496498 SPATA31D1Q6ZQQ2 1576 aa27.38■■□□□ 1.97
NPDC1-206ENST00000496498 TNRQ92752 1358 aa27.37■■□□□ 1.97
NPDC1-206ENST00000496498 CEP170BQ9Y4F5 1589 aaPredicted RBP27.37■■□□□ 1.97
NPDC1-206ENST00000496498 HSPA2P54652 639 aa27.36■■□□□ 1.97
NPDC1-206ENST00000496498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
NPDC1-206ENST00000496498 NLRP1Q9C000 1473 aa27.34■■□□□ 1.97
NPDC1-206ENST00000496498 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
NPDC1-206ENST00000496498 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.97
NPDC1-206ENST00000496498 ERVK-7P63135 1459 aa27.33■■□□□ 1.97
NPDC1-206ENST00000496498 FBXO31Q5XUX0 539 aaPredicted RBP27.32■■□□□ 1.96
NPDC1-206ENST00000496498 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
NPDC1-206ENST00000496498 TET3O43151 1660 aa27.3■■□□□ 1.96
NPDC1-206ENST00000496498 IQGAP3Q86VI3 1631 aa27.27■■□□□ 1.96
NPDC1-206ENST00000496498 PLA2R1Q13018 1463 aa27.27■■□□□ 1.96
NPDC1-206ENST00000496498 RPRD2Q5VT52 1461 aaKnown RBP27.27■■□□□ 1.96
NPDC1-206ENST00000496498 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
NPDC1-206ENST00000496498 STRCQ7RTU9 1775 aa27.26■■□□□ 1.95
NPDC1-206ENST00000496498 NAIPQ13075 1403 aa27.25■■□□□ 1.95
NPDC1-206ENST00000496498 DMRT2Q9Y5R5 561 aa27.23■■□□□ 1.95
NPDC1-206ENST00000496498 CFAP65Q6ZU64 1925 aaKnown RBP27.23■■□□□ 1.95
NPDC1-206ENST00000496498 UGGT1Q9NYU2 1555 aa27.21■■□□□ 1.95
NPDC1-206ENST00000496498 NUP155O75694 1391 aa27.18■■□□□ 1.94
NPDC1-206ENST00000496498 PTPRTO14522 1441 aa27.17■■□□□ 1.94
NPDC1-206ENST00000496498 NOS1P29475 1434 aa27.17■■□□□ 1.94
NPDC1-206ENST00000496498 PKD2Q13563 968 aa27.16■■□□□ 1.94
NPDC1-206ENST00000496498 KDM5AP29375 1690 aaKnown RBP27.16■■□□□ 1.94
NPDC1-206ENST00000496498 THEMISQ8N1K5 641 aaPredicted RBP27.15■■□□□ 1.94
NPDC1-206ENST00000496498 E9PCH4 1651 aa27.14■■□□□ 1.93
NPDC1-206ENST00000496498 POLR1AO95602 1720 aaPredicted RBP27.13■■□□□ 1.93
NPDC1-206ENST00000496498 UBR1Q8IWV7 1749 aa27.13■■□□□ 1.93
NPDC1-206ENST00000496498 SYNMO15061 1565 aa27.13■■□□□ 1.93
NPDC1-206ENST00000496498 PIK3C2BO00750 1634 aa27.09■■□□□ 1.93
NPDC1-206ENST00000496498 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
NPDC1-206ENST00000496498 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
NPDC1-206ENST00000496498 ANKLE2Q86XL3 938 aa27.04■■□□□ 1.92
NPDC1-206ENST00000496498 ADGRB3O60242 1522 aa27.03■■□□□ 1.92
NPDC1-206ENST00000496498 SLIT1O75093 1534 aa27.03■■□□□ 1.92
NPDC1-206ENST00000496498 NCKAP5LQ9HCH0 1330 aa27.03■■□□□ 1.92
NPDC1-206ENST00000496498 NEURL4Q96JN8 1562 aa27.01■■□□□ 1.92
NPDC1-206ENST00000496498 ARHGAP23Q9P227 1491 aa27.01■■□□□ 1.91
NPDC1-206ENST00000496498 IDI1Q13907 227 aa27.01■■□□□ 1.91
NPDC1-206ENST00000496498 SPHKAPQ2M3C7 1700 aa27.01■■□□□ 1.91
NPDC1-206ENST00000496498 MED14O60244 1454 aa27■■□□□ 1.91
NPDC1-206ENST00000496498 STAG3Q9UJ98 1225 aa27■■□□□ 1.91
NPDC1-206ENST00000496498 SETD5Q9C0A6 1442 aa26.98■■□□□ 1.91
NPDC1-206ENST00000496498 TRIM52Q96A61 297 aa26.97■■□□□ 1.91
NPDC1-206ENST00000496498 SCAF11Q99590 1463 aaKnown RBP26.96■■□□□ 1.91
NPDC1-206ENST00000496498 TMEM2Q9UHN6 1383 aa26.95■■□□□ 1.9
NPDC1-206ENST00000496498 IQGAP1P46940 1657 aa26.95■■□□□ 1.9
NPDC1-206ENST00000496498 NPHP4O75161 1426 aaPredicted RBP26.94■■□□□ 1.9
NPDC1-206ENST00000496498 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
NPDC1-206ENST00000496498 EID1Q9Y6B2 187 aa26.92■■□□□ 1.9
NPDC1-206ENST00000496498 TRPM2O94759 1503 aa26.91■■□□□ 1.9
NPDC1-206ENST00000496498 SLC4A1APQ9BWU0 796 aaKnown RBP26.9■■□□□ 1.9
NPDC1-206ENST00000496498 MYO5BQ9ULV0 1848 aa26.88■■□□□ 1.89
NPDC1-206ENST00000496498 TXNDC2Q86VQ3 553 aa26.87■■□□□ 1.89
NPDC1-206ENST00000496498 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
NPDC1-206ENST00000496498 HDGFP51858 240 aaKnown RBP26.85■■□□□ 1.89
NPDC1-206ENST00000496498 RAB3GAP2Q9H2M9 1393 aa26.84■■□□□ 1.89
NPDC1-206ENST00000496498 LTKP29376 864 aa26.83■■□□□ 1.89
NPDC1-206ENST00000496498 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
NPDC1-206ENST00000496498 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
NPDC1-206ENST00000496498 CLTCL1P53675 1640 aa26.82■■□□□ 1.88
NPDC1-206ENST00000496498 IQSEC2Q5JU85 1478 aa26.81■■□□□ 1.88
NPDC1-206ENST00000496498 HRCP23327 699 aa26.81■■□□□ 1.88
NPDC1-206ENST00000496498 KIF1BO60333 1816 aa26.81■■□□□ 1.88
NPDC1-206ENST00000496498 RIMS2Q9UQ26 1411 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms