RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
CHCHD3-206ENST00000496427 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
CHCHD3-206ENST00000496427 REREQ9P2R6 1566 aa11.59□□□□□ -0.55
CHCHD3-206ENST00000496427 SUPT6HQ7KZ85 1726 aaKnown RBP11.59□□□□□ -0.55
CHCHD3-206ENST00000496427 ABCC1P33527 1531 aa11.59□□□□□ -0.55
CHCHD3-206ENST00000496427 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
CHCHD3-206ENST00000496427 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
CHCHD3-206ENST00000496427 UHRF1BP1Q6BDS2 1440 aa11.57□□□□□ -0.56
CHCHD3-206ENST00000496427 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
CHCHD3-206ENST00000496427 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
CHCHD3-206ENST00000496427 AFAP1Q8N556 730 aa11.55□□□□□ -0.56
CHCHD3-206ENST00000496427 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
CHCHD3-206ENST00000496427 MROH2AA6NES4 1674 aa11.55□□□□□ -0.56
CHCHD3-206ENST00000496427 CLIP1P30622 1438 aa11.54□□□□□ -0.56
CHCHD3-206ENST00000496427 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
CHCHD3-206ENST00000496427 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
CHCHD3-206ENST00000496427 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
CHCHD3-206ENST00000496427 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
CHCHD3-206ENST00000496427 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
CHCHD3-206ENST00000496427 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
CHCHD3-206ENST00000496427 MLH3Q9UHC1 1453 aa11.52□□□□□ -0.56
CHCHD3-206ENST00000496427 AGLP35573 1532 aa11.52□□□□□ -0.57
CHCHD3-206ENST00000496427 ILDR2Q71H61 639 aa11.52□□□□□ -0.57
CHCHD3-206ENST00000496427 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
CHCHD3-206ENST00000496427 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.57
CHCHD3-206ENST00000496427 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
CHCHD3-206ENST00000496427 ZNF142P52746 1687 aaPredicted RBP11.51□□□□□ -0.57
CHCHD3-206ENST00000496427 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
CHCHD3-206ENST00000496427 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-206ENST00000496427 CAMSAP1Q5T5Y3 1602 aa11.49□□□□□ -0.57
CHCHD3-206ENST00000496427 PTPRTO14522 1441 aa11.49□□□□□ -0.57
CHCHD3-206ENST00000496427 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
CHCHD3-206ENST00000496427 INO80Q9ULG1 1556 aaPredicted RBP11.48□□□□□ -0.57
CHCHD3-206ENST00000496427 NCOA1Q15788 1441 aa11.47□□□□□ -0.57
CHCHD3-206ENST00000496427 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.57
CHCHD3-206ENST00000496427 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
CHCHD3-206ENST00000496427 ATP7AQ04656 1500 aa11.45□□□□□ -0.58
CHCHD3-206ENST00000496427 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
CHCHD3-206ENST00000496427 POLR1AO95602 1720 aaPredicted RBP11.45□□□□□ -0.58
CHCHD3-206ENST00000496427 ADGBQ8N7X0 1667 aa11.45□□□□□ -0.58
CHCHD3-206ENST00000496427 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
CHCHD3-206ENST00000496427 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
CHCHD3-206ENST00000496427 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
CHCHD3-206ENST00000496427 CNTLNQ9NXG0 1405 aa11.43□□□□□ -0.58
CHCHD3-206ENST00000496427 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
CHCHD3-206ENST00000496427 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
CHCHD3-206ENST00000496427 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
CHCHD3-206ENST00000496427 SOCS7O14512 581 aa11.41□□□□□ -0.58
CHCHD3-206ENST00000496427 NPATQ14207 1427 aa11.4□□□□□ -0.58
CHCHD3-206ENST00000496427 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
CHCHD3-206ENST00000496427 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
CHCHD3-206ENST00000496427 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
CHCHD3-206ENST00000496427 A2MP01023 1474 aa11.38□□□□□ -0.59
CHCHD3-206ENST00000496427 ZNF335Q9H4Z2 1342 aaPredicted RBP11.38□□□□□ -0.59
CHCHD3-206ENST00000496427 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■■■□ 26.1
CHCHD3-206ENST00000496427 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
CHCHD3-206ENST00000496427 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
CHCHD3-206ENST00000496427 PTPRKQ15262 1439 aa11.36□□□□□ -0.59
CHCHD3-206ENST00000496427 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
CHCHD3-206ENST00000496427 PLA2R1Q13018 1463 aa11.36□□□□□ -0.59
CHCHD3-206ENST00000496427 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
CHCHD3-206ENST00000496427 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
CHCHD3-206ENST00000496427 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
CHCHD3-206ENST00000496427 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
CHCHD3-206ENST00000496427 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 GGT6Q6P531 493 aa11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
CHCHD3-206ENST00000496427 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
CHCHD3-206ENST00000496427 STRCP1A6NGW2 1772 aa11.32□□□□□ -0.6
CHCHD3-206ENST00000496427 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
CHCHD3-206ENST00000496427 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
CHCHD3-206ENST00000496427 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
CHCHD3-206ENST00000496427 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
CHCHD3-206ENST00000496427 MTUS2Q5JR59 1369 aa11.3□□□□□ -0.6
CHCHD3-206ENST00000496427 CEP152O94986 1710 aa11.29□□□□□ -0.6
CHCHD3-206ENST00000496427 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
CHCHD3-206ENST00000496427 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
CHCHD3-206ENST00000496427 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
CHCHD3-206ENST00000496427 PKD2Q13563 968 aa11.28□□□□□ -0.6
CHCHD3-206ENST00000496427 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
CHCHD3-206ENST00000496427 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
CHCHD3-206ENST00000496427 CAMSAP2Q08AD1 1489 aa11.27□□□□□ -0.6
CHCHD3-206ENST00000496427 CPS1P31327 1500 aa11.26□□□□□ -0.61
CHCHD3-206ENST00000496427 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
CHCHD3-206ENST00000496427 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
CHCHD3-206ENST00000496427 PZPP20742 1482 aa11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 FBXO31Q5XUX0 539 aaPredicted RBP11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 TNRQ92752 1358 aa11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
CHCHD3-206ENST00000496427 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 PROM2Q8N271 834 aa11.24□□□□□ -0.61
CHCHD3-206ENST00000496427 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms