RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
THBS3-208ENST00000496332 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
THBS3-208ENST00000496332 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
THBS3-208ENST00000496332 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
THBS3-208ENST00000496332 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.52
THBS3-208ENST00000496332 DNMT1P26358 1616 aaKnown RBP18.32■□□□□ 0.52
THBS3-208ENST00000496332 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
THBS3-208ENST00000496332 FBXO31Q5XUX0 539 aaPredicted RBP18.32■□□□□ 0.52
THBS3-208ENST00000496332 CHIC2Q9UKJ5 165 aa18.32■□□□□ 0.52
THBS3-208ENST00000496332 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
THBS3-208ENST00000496332 STRCQ7RTU9 1775 aa18.31■□□□□ 0.52
THBS3-208ENST00000496332 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
THBS3-208ENST00000496332 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
THBS3-208ENST00000496332 PZPP20742 1482 aa18.29■□□□□ 0.52
THBS3-208ENST00000496332 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
THBS3-208ENST00000496332 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
THBS3-208ENST00000496332 TNRQ92752 1358 aa18.28■□□□□ 0.52
THBS3-208ENST00000496332 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
THBS3-208ENST00000496332 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.52
THBS3-208ENST00000496332 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
THBS3-208ENST00000496332 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
THBS3-208ENST00000496332 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
THBS3-208ENST00000496332 ABCC3O15438 1527 aa18.26■□□□□ 0.51
THBS3-208ENST00000496332 PTPRTO14522 1441 aa18.25■□□□□ 0.51
THBS3-208ENST00000496332 MROH1Q8NDA8 1641 aa18.25■□□□□ 0.51
THBS3-208ENST00000496332 FBXO41Q8TF61 875 aa18.25■□□□□ 0.51
THBS3-208ENST00000496332 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
THBS3-208ENST00000496332 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
THBS3-208ENST00000496332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
THBS3-208ENST00000496332 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
THBS3-208ENST00000496332 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
THBS3-208ENST00000496332 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
THBS3-208ENST00000496332 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
THBS3-208ENST00000496332 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
THBS3-208ENST00000496332 PKD2Q13563 968 aa18.2■□□□□ 0.5
THBS3-208ENST00000496332 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
THBS3-208ENST00000496332 KANK1Q14678 1352 aa18.18■□□□□ 0.5
THBS3-208ENST00000496332 NLRP1Q9C000 1473 aa18.18■□□□□ 0.5
THBS3-208ENST00000496332 CEP152O94986 1710 aa18.18■□□□□ 0.5
THBS3-208ENST00000496332 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
THBS3-208ENST00000496332 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
THBS3-208ENST00000496332 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
THBS3-208ENST00000496332 THEMISQ8N1K5 641 aaPredicted RBP18.16■□□□□ 0.5
THBS3-208ENST00000496332 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
THBS3-208ENST00000496332 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
THBS3-208ENST00000496332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
THBS3-208ENST00000496332 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
THBS3-208ENST00000496332 ITGAEP38570 1179 aa18.13■□□□□ 0.49
THBS3-208ENST00000496332 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
THBS3-208ENST00000496332 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
THBS3-208ENST00000496332 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
THBS3-208ENST00000496332 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
THBS3-208ENST00000496332 LTBP4Q8N2S1 1624 aa18.09■□□□□ 0.49
THBS3-208ENST00000496332 ZNF335Q9H4Z2 1342 aaPredicted RBP18.09■□□□□ 0.49
THBS3-208ENST00000496332 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.48
THBS3-208ENST00000496332 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
THBS3-208ENST00000496332 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
THBS3-208ENST00000496332 POLR1AO95602 1720 aaPredicted RBP18.04■□□□□ 0.48
THBS3-208ENST00000496332 RRBP1Q9P2E9 1410 aaKnown RBP18.04■□□□□ 0.48
THBS3-208ENST00000496332 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
THBS3-208ENST00000496332 MED14O60244 1454 aa18.02■□□□□ 0.48
THBS3-208ENST00000496332 IDI1Q13907 227 aa18.02■□□□□ 0.48
THBS3-208ENST00000496332 UBR1Q8IWV7 1749 aa18.02■□□□□ 0.48
THBS3-208ENST00000496332 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
THBS3-208ENST00000496332 NOS1P29475 1434 aa18.01■□□□□ 0.47
THBS3-208ENST00000496332 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
THBS3-208ENST00000496332 UNC13BO14795 1591 aa18■□□□□ 0.47
THBS3-208ENST00000496332 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
THBS3-208ENST00000496332 RPRD2Q5VT52 1461 aaKnown RBP17.99■□□□□ 0.47
THBS3-208ENST00000496332 SYNMO15061 1565 aa17.99■□□□□ 0.47
THBS3-208ENST00000496332 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
THBS3-208ENST00000496332 LTKP29376 864 aa17.98■□□□□ 0.47
THBS3-208ENST00000496332 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
THBS3-208ENST00000496332 SLIT1O75093 1534 aa17.98■□□□□ 0.47
THBS3-208ENST00000496332 TET3O43151 1660 aa17.97■□□□□ 0.47
THBS3-208ENST00000496332 ARHGAP23Q9P227 1491 aa17.97■□□□□ 0.47
THBS3-208ENST00000496332 NUP155O75694 1391 aa17.97■□□□□ 0.47
THBS3-208ENST00000496332 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
THBS3-208ENST00000496332 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
THBS3-208ENST00000496332 TMEM2Q9UHN6 1383 aa17.96■□□□□ 0.47
THBS3-208ENST00000496332 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
THBS3-208ENST00000496332 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
THBS3-208ENST00000496332 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
THBS3-208ENST00000496332 CPS1P31327 1500 aa17.93■□□□□ 0.46
THBS3-208ENST00000496332 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
THBS3-208ENST00000496332 KDM5AP29375 1690 aaKnown RBP17.92■□□□□ 0.46
THBS3-208ENST00000496332 ADGRB3O60242 1522 aa17.91■□□□□ 0.46
THBS3-208ENST00000496332 NAIPQ13075 1403 aa17.9■□□□□ 0.46
THBS3-208ENST00000496332 E9PCH4 1651 aa17.9■□□□□ 0.46
THBS3-208ENST00000496332 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
THBS3-208ENST00000496332 HFM1A2PYH4 1435 aa17.85■□□□□ 0.45
THBS3-208ENST00000496332 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
THBS3-208ENST00000496332 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
THBS3-208ENST00000496332 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.45
THBS3-208ENST00000496332 BCANQ96GW7 911 aa17.83■□□□□ 0.44
THBS3-208ENST00000496332 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
THBS3-208ENST00000496332 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
THBS3-208ENST00000496332 ZFYVE9O95405 1425 aa17.82■□□□□ 0.44
THBS3-208ENST00000496332 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
THBS3-208ENST00000496332 TOM1O60784 492 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms