RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RNF17Q9BXT8 1623 aaKnown RBP32■■■□□ 2.71
COL9A2-211ENST00000496215 PTPRKQ15262 1439 aa31.99■■■□□ 2.71
COL9A2-211ENST00000496215 KDM5DQ9BY66 1539 aa31.98■■■□□ 2.71
COL9A2-211ENST00000496215 STRCQ7RTU9 1775 aa31.98■■■□□ 2.71
COL9A2-211ENST00000496215 DUOX2Q9NRD8 1548 aa31.97■■■□□ 2.71
COL9A2-211ENST00000496215 PPP6R1Q9UPN7 881 aa31.97■■■□□ 2.71
COL9A2-211ENST00000496215 MROH1Q8NDA8 1641 aa31.97■■■□□ 2.71
COL9A2-211ENST00000496215 MYO3AQ8NEV4 1616 aa31.95■■■□□ 2.71
COL9A2-211ENST00000496215 ZC3H13Q5T200 1668 aaKnown RBP31.92■■■□□ 2.7
COL9A2-211ENST00000496215 KIF15Q9NS87 1388 aa31.92■■■□□ 2.7
COL9A2-211ENST00000496215 ZNF142P52746 1687 aaPredicted RBP31.9■■■□□ 2.7
COL9A2-211ENST00000496215 ERBINQ96RT1 1412 aa31.87■■■□□ 2.69
COL9A2-211ENST00000496215 FAM50AQ14320 339 aaKnown RBP31.86■■■□□ 2.69
COL9A2-211ENST00000496215 ABCC3O15438 1527 aa31.85■■■□□ 2.69
COL9A2-211ENST00000496215 PZPP20742 1482 aa31.85■■■□□ 2.69
COL9A2-211ENST00000496215 CEP170BQ9Y4F5 1589 aaPredicted RBP31.84■■■□□ 2.69
COL9A2-211ENST00000496215 ANKRD30AQ9BXX3 1397 aa31.83■■■□□ 2.69
COL9A2-211ENST00000496215 RRP7BPQ9NSQ0 103 aa31.83■■■□□ 2.69
COL9A2-211ENST00000496215 ADGRL2O95490 1459 aa31.83■■■□□ 2.69
COL9A2-211ENST00000496215 WASHC2CQ9Y4E1 1318 aa31.82■■■□□ 2.68
COL9A2-211ENST00000496215 CEP152O94986 1710 aa31.82■■■□□ 2.68
COL9A2-211ENST00000496215 PRDM15P57071 1507 aaPredicted RBP31.81■■■□□ 2.68
COL9A2-211ENST00000496215 FBXO31Q5XUX0 539 aaPredicted RBP31.81■■■□□ 2.68
COL9A2-211ENST00000496215 CAMSAP1Q5T5Y3 1602 aa31.8■■■□□ 2.68
COL9A2-211ENST00000496215 CHIC2Q9UKJ5 165 aa31.8■■■□□ 2.68
COL9A2-211ENST00000496215 NCOA1Q15788 1441 aa31.8■■■□□ 2.68
COL9A2-211ENST00000496215 DEPDC5O75140 1603 aa31.79■■■□□ 2.68
COL9A2-211ENST00000496215 PPARGC1BQ86YN6 1023 aaKnown RBP31.78■■■□□ 2.68
COL9A2-211ENST00000496215 TNRQ92752 1358 aa31.73■■■□□ 2.67
COL9A2-211ENST00000496215 A2ML1A8K2U0 1454 aa31.72■■■□□ 2.67
COL9A2-211ENST00000496215 SPATA31D1Q6ZQQ2 1576 aa31.69■■■□□ 2.66
COL9A2-211ENST00000496215 PTPRTO14522 1441 aa31.68■■■□□ 2.66
COL9A2-211ENST00000496215 PLA2R1Q13018 1463 aa31.67■■■□□ 2.66
COL9A2-211ENST00000496215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.67■■■□□ 2.66
COL9A2-211ENST00000496215 VWDEQ8N2E2 1590 aa31.66■■■□□ 2.66
COL9A2-211ENST00000496215 ERVK-7P63135 1459 aa31.65■■■□□ 2.66
COL9A2-211ENST00000496215 KANK1Q14678 1352 aa31.62■■■□□ 2.65
COL9A2-211ENST00000496215 CFAP65Q6ZU64 1925 aaKnown RBP31.62■■■□□ 2.65
COL9A2-211ENST00000496215 NCKAP5LQ9HCH0 1330 aa31.62■■■□□ 2.65
COL9A2-211ENST00000496215 DMRT2Q9Y5R5 561 aa31.62■■■□□ 2.65
COL9A2-211ENST00000496215 ANKRD50Q9ULJ7 1429 aa31.61■■■□□ 2.65
COL9A2-211ENST00000496215 NLRP1Q9C000 1473 aa31.6■■■□□ 2.65
COL9A2-211ENST00000496215 RRBP1Q9P2E9 1410 aaKnown RBP31.6■■■□□ 2.65
COL9A2-211ENST00000496215 ROCK1Q13464 1354 aa31.6■■■□□ 2.65
COL9A2-211ENST00000496215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.59■■■□□ 2.65
COL9A2-211ENST00000496215 ARHGAP31Q2M1Z3 1444 aa31.58■■■□□ 2.65
COL9A2-211ENST00000496215 LMTK2Q8IWU2 1503 aa31.58■■■□□ 2.65
COL9A2-211ENST00000496215 UNC13BO14795 1591 aa31.56■■■□□ 2.64
COL9A2-211ENST00000496215 NEURL4Q96JN8 1562 aa31.56■■■□□ 2.64
COL9A2-211ENST00000496215 UGGT1Q9NYU2 1555 aa31.55■■■□□ 2.64
COL9A2-211ENST00000496215 POLR1AO95602 1720 aaPredicted RBP31.55■■■□□ 2.64
COL9A2-211ENST00000496215 EFCAB6Q5THR3 1501 aa31.53■■■□□ 2.64
COL9A2-211ENST00000496215 LTBP4Q8N2S1 1624 aa31.53■■■□□ 2.64
COL9A2-211ENST00000496215 ITGAEP38570 1179 aa31.52■■■□□ 2.64
COL9A2-211ENST00000496215 CERKQ8TCT0 537 aa31.52■■■□□ 2.64
COL9A2-211ENST00000496215 FBXO41Q8TF61 875 aa31.52■■■□□ 2.64
COL9A2-211ENST00000496215 PKD2Q13563 968 aa31.5■■■□□ 2.63
COL9A2-211ENST00000496215 UBR1Q8IWV7 1749 aa31.49■■■□□ 2.63
COL9A2-211ENST00000496215 TET3O43151 1660 aa31.45■■■□□ 2.63
COL9A2-211ENST00000496215 GCC2Q8IWJ2 1684 aa31.44■■■□□ 2.62
COL9A2-211ENST00000496215 SYNMO15061 1565 aa31.44■■■□□ 2.62
COL9A2-211ENST00000496215 PIK3C2BO00750 1634 aa31.42■■■□□ 2.62
COL9A2-211ENST00000496215 IQGAP3Q86VI3 1631 aa31.41■■■□□ 2.62
COL9A2-211ENST00000496215 THEMISQ8N1K5 641 aaPredicted RBP31.4■■■□□ 2.62
COL9A2-211ENST00000496215 ZNF335Q9H4Z2 1342 aaPredicted RBP31.4■■■□□ 2.62
COL9A2-211ENST00000496215 NOS1P29475 1434 aa31.38■■■□□ 2.61
COL9A2-211ENST00000496215 RPRD2Q5VT52 1461 aaKnown RBP31.37■■■□□ 2.61
COL9A2-211ENST00000496215 MED14O60244 1454 aa31.36■■■□□ 2.61
COL9A2-211ENST00000496215 ANKLE2Q86XL3 938 aa31.33■■■□□ 2.61
COL9A2-211ENST00000496215 ARHGAP23Q9P227 1491 aa31.33■■■□□ 2.61
COL9A2-211ENST00000496215 KDM5AP29375 1690 aaKnown RBP31.32■■■□□ 2.6
COL9A2-211ENST00000496215 IQGAP1P46940 1657 aa31.32■■■□□ 2.6
COL9A2-211ENST00000496215 NPHP4O75161 1426 aaPredicted RBP31.32■■■□□ 2.6
COL9A2-211ENST00000496215 E9PCH4 1651 aa31.32■■■□□ 2.6
COL9A2-211ENST00000496215 SLIT1O75093 1534 aa31.31■■■□□ 2.6
COL9A2-211ENST00000496215 NAIPQ13075 1403 aa31.27■■■□□ 2.6
COL9A2-211ENST00000496215 IDI1Q13907 227 aa31.27■■■□□ 2.6
COL9A2-211ENST00000496215 ADGRB3O60242 1522 aa31.25■■■□□ 2.59
COL9A2-211ENST00000496215 IQSEC2Q5JU85 1478 aa31.25■■■□□ 2.59
COL9A2-211ENST00000496215 NUP155O75694 1391 aa31.24■■■□□ 2.59
COL9A2-211ENST00000496215 SCAF11Q99590 1463 aaKnown RBP31.24■■■□□ 2.59
COL9A2-211ENST00000496215 HFM1A2PYH4 1435 aa31.24■■■□□ 2.59
COL9A2-211ENST00000496215 LTKP29376 864 aa31.23■■■□□ 2.59
COL9A2-211ENST00000496215 TMEM2Q9UHN6 1383 aa31.2■■■□□ 2.59
COL9A2-211ENST00000496215 MYO5BQ9ULV0 1848 aa31.2■■■□□ 2.59
COL9A2-211ENST00000496215 STRCP1A6NGW2 1772 aa31.2■■■□□ 2.58
COL9A2-211ENST00000496215 STAG3Q9UJ98 1225 aa31.15■■■□□ 2.58
COL9A2-211ENST00000496215 TMEM131LA2VDJ0 1609 aa31.15■■■□□ 2.58
COL9A2-211ENST00000496215 TXNDC2Q86VQ3 553 aa31.14■■■□□ 2.58
COL9A2-211ENST00000496215 SPHKAPQ2M3C7 1700 aa31.14■■■□□ 2.58
COL9A2-211ENST00000496215 CPS1P31327 1500 aa31.14■■■□□ 2.57
COL9A2-211ENST00000496215 SLC52A1Q9NWF4 448 aa31.13■■■□□ 2.57
COL9A2-211ENST00000496215 ZFYVE9O95405 1425 aa31.07■■■□□ 2.56
COL9A2-211ENST00000496215 EID1Q9Y6B2 187 aa31.06■■■□□ 2.56
COL9A2-211ENST00000496215 LRRC7Q96NW7 1537 aa31■■■□□ 2.55
COL9A2-211ENST00000496215 TRPM2O94759 1503 aa30.99■■■□□ 2.55
COL9A2-211ENST00000496215 RIMS2Q9UQ26 1411 aa30.98■■■□□ 2.55
COL9A2-211ENST00000496215 ALKQ9UM73 1620 aa30.98■■■□□ 2.55
COL9A2-211ENST00000496215 TRIM52Q96A61 297 aa30.97■■■□□ 2.55
COL9A2-211ENST00000496215 UBAP1LF5GYI3 381 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms