RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, human

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPM1F-208	ENST00000496143	NPAT	Q14207	1427 aa		32.7	■■■□□ 2.83
PPM1F-208	ENST00000496143	ANKRD30A	Q9BXX3	1397 aa		32.69	■■■□□ 2.82
PPM1F-208	ENST00000496143	SETD1B	Q9UPS6	1966 aa	Known RBP	32.69	■■■□□ 2.82
PPM1F-208	ENST00000496143	KDM5D	Q9BY66	1539 aa		32.67	■■■□□ 2.82
PPM1F-208	ENST00000496143	RRP7BP	Q9NSQ0	103 aa		32.66	■■■□□ 2.82
PPM1F-208	ENST00000496143	WASHC2C	Q9Y4E1	1318 aa		32.66	■■■□□ 2.82
PPM1F-208	ENST00000496143	HSPA2	P54652	639 aa		32.64	■■■□□ 2.82
PPM1F-208	ENST00000496143	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.64	■■■□□ 2.82
PPM1F-208	ENST00000496143	ERBIN	Q96RT1	1412 aa		32.64	■■■□□ 2.82
PPM1F-208	ENST00000496143	RNF17	Q9BXT8	1623 aa	Known RBP	32.64	■■■□□ 2.82
PPM1F-208	ENST00000496143	CHIC2	Q9UKJ5	165 aa		32.63	■■■□□ 2.81
PPM1F-208	ENST00000496143	ADGRL2	O95490	1459 aa		32.59	■■■□□ 2.81
PPM1F-208	ENST00000496143	PTPRK	Q15262	1439 aa		32.59	■■■□□ 2.81
PPM1F-208	ENST00000496143	NCOA1	Q15788	1441 aa		32.58	■■■□□ 2.81
PPM1F-208	ENST00000496143	ZC3H13	Q5T200	1668 aa	Known RBP	32.54	■■■□□ 2.8
PPM1F-208	ENST00000496143	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
PPM1F-208	ENST00000496143	PZP	P20742	1482 aa		32.53	■■■□□ 2.8
PPM1F-208	ENST00000496143	ABCC3	O15438	1527 aa		32.51	■■■□□ 2.79
PPM1F-208	ENST00000496143	MROH1	Q8NDA8	1641 aa		32.5	■■■□□ 2.79
PPM1F-208	ENST00000496143	PRDM15	P57071	1507 aa	Predicted RBP	32.48	■■■□□ 2.79
PPM1F-208	ENST00000496143	KANK1	Q14678	1352 aa		32.47	■■■□□ 2.79
PPM1F-208	ENST00000496143	MYO3A	Q8NEV4	1616 aa		32.46	■■■□□ 2.79
PPM1F-208	ENST00000496143	ROCK1	Q13464	1354 aa		32.44	■■■□□ 2.78
PPM1F-208	ENST00000496143	TNR	Q92752	1358 aa		32.44	■■■□□ 2.78
PPM1F-208	ENST00000496143	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.43	■■■□□ 2.78
PPM1F-208	ENST00000496143	DEPDC5	O75140	1603 aa		32.43	■■■□□ 2.78
PPM1F-208	ENST00000496143	ANKRD50	Q9ULJ7	1429 aa		32.43	■■■□□ 2.78
PPM1F-208	ENST00000496143	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.42	■■■□□ 2.78
PPM1F-208	ENST00000496143	ZNF142	P52746	1687 aa	Predicted RBP	32.41	■■■□□ 2.78
PPM1F-208	ENST00000496143	DMRT2	Q9Y5R5	561 aa		32.41	■■■□□ 2.78
PPM1F-208	ENST00000496143	RRBP1	Q9P2E9	1410 aa	Known RBP	32.41	■■■□□ 2.78
PPM1F-208	ENST00000496143	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.41	■■■□□ 2.78
PPM1F-208	ENST00000496143	ITGAE	P38570	1179 aa		32.39	■■■□□ 2.78
PPM1F-208	ENST00000496143	CEP152	O94986	1710 aa		32.39	■■■□□ 2.78
PPM1F-208	ENST00000496143	CAMSAP1	Q5T5Y3	1602 aa		32.38	■■■□□ 2.77
PPM1F-208	ENST00000496143	A2ML1	A8K2U0	1454 aa		32.37	■■■□□ 2.77
PPM1F-208	ENST00000496143	ARHGAP31	Q2M1Z3	1444 aa		32.34	■■■□□ 2.77
PPM1F-208	ENST00000496143	NLRP1	Q9C000	1473 aa		32.33	■■■□□ 2.77
PPM1F-208	ENST00000496143	SPATA31D1	Q6ZQQ2	1576 aa		32.32	■■■□□ 2.76
PPM1F-208	ENST00000496143	ERVK-7	P63135	1459 aa		32.31	■■■□□ 2.76
PPM1F-208	ENST00000496143	STRC	Q7RTU9	1775 aa		32.31	■■■□□ 2.76
PPM1F-208	ENST00000496143	LMTK2	Q8IWU2	1503 aa		32.31	■■■□□ 2.76
PPM1F-208	ENST00000496143	VWDE	Q8N2E2	1590 aa		32.3	■■■□□ 2.76
PPM1F-208	ENST00000496143	PLA2R1	Q13018	1463 aa		32.29	■■■□□ 2.76
PPM1F-208	ENST00000496143	PTPRT	O14522	1441 aa		32.26	■■■□□ 2.76
PPM1F-208	ENST00000496143	PKD2	Q13563	968 aa		32.24	■■■□□ 2.75
PPM1F-208	ENST00000496143	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.21	■■■□□ 2.75
PPM1F-208	ENST00000496143	UNC13B	O14795	1591 aa		32.2	■■■□□ 2.75
PPM1F-208	ENST00000496143	UGGT1	Q9NYU2	1555 aa		32.2	■■■□□ 2.75
PPM1F-208	ENST00000496143	EFCAB6	Q5THR3	1501 aa		32.19	■■■□□ 2.74
PPM1F-208	ENST00000496143	NCKAP5L	Q9HCH0	1330 aa		32.18	■■■□□ 2.74
PPM1F-208	ENST00000496143	RPRD2	Q5VT52	1461 aa	Known RBP	32.14	■■■□□ 2.74
PPM1F-208	ENST00000496143	CFAP65	Q6ZU64	1925 aa	Known RBP	32.14	■■■□□ 2.74
PPM1F-208	ENST00000496143	TET3	O43151	1660 aa		32.12	■■■□□ 2.73
PPM1F-208	ENST00000496143	ANKLE2	Q86XL3	938 aa		32.1	■■■□□ 2.73
PPM1F-208	ENST00000496143	NUP155	O75694	1391 aa		32.08	■■■□□ 2.73
PPM1F-208	ENST00000496143	NOS1	P29475	1434 aa		32.07	■■■□□ 2.72
PPM1F-208	ENST00000496143	IQGAP3	Q86VI3	1631 aa		32.07	■■■□□ 2.72
PPM1F-208	ENST00000496143	GCC2	Q8IWJ2	1684 aa		32.06	■■■□□ 2.72
PPM1F-208	ENST00000496143	NAIP	Q13075	1403 aa		32.05	■■■□□ 2.72
PPM1F-208	ENST00000496143	POLR1A	O95602	1720 aa	Predicted RBP	32.05	■■■□□ 2.72
PPM1F-208	ENST00000496143	STAG3	Q9UJ98	1225 aa		32.04	■■■□□ 2.72
PPM1F-208	ENST00000496143	UBR1	Q8IWV7	1749 aa		32.03	■■■□□ 2.72
PPM1F-208	ENST00000496143	HFM1	A2PYH4	1435 aa		32.02	■■■□□ 2.72
PPM1F-208	ENST00000496143	CERK	Q8TCT0	537 aa		32.02	■■■□□ 2.72
PPM1F-208	ENST00000496143	SLC52A1	Q9NWF4	448 aa		32.02	■■■□□ 2.72
PPM1F-208	ENST00000496143	SYNM	O15061	1565 aa		32.01	■■■□□ 2.71
PPM1F-208	ENST00000496143	IDI1	Q13907	227 aa		31.99	■■■□□ 2.71
PPM1F-208	ENST00000496143	PIK3C2B	O00750	1634 aa		31.99	■■■□□ 2.71
PPM1F-208	ENST00000496143	NEURL4	Q96JN8	1562 aa		31.98	■■■□□ 2.71
PPM1F-208	ENST00000496143	ILDR1	Q86SU0	546 aa	Predicted RBP	31.97	■■■□□ 2.71
PPM1F-208	ENST00000496143	FBXO41	Q8TF61	875 aa		31.97	■■■□□ 2.71
PPM1F-208	ENST00000496143	KDM5A	P29375	1690 aa	Known RBP	31.96	■■■□□ 2.71
PPM1F-208	ENST00000496143	MED14	O60244	1454 aa		31.96	■■■□□ 2.71
PPM1F-208	ENST00000496143	NPHP4	O75161	1426 aa	Predicted RBP	31.95	■■■□□ 2.71
PPM1F-208	ENST00000496143		E9PCH4	1651 aa		31.94	■■■□□ 2.7
PPM1F-208	ENST00000496143	SLIT1	O75093	1534 aa		31.94	■■■□□ 2.7
PPM1F-208	ENST00000496143	EID1	Q9Y6B2	187 aa		31.93	■■■□□ 2.7
PPM1F-208	ENST00000496143	ARHGAP23	Q9P227	1491 aa		31.92	■■■□□ 2.7
PPM1F-208	ENST00000496143	SCAF11	Q99590	1463 aa	Known RBP	31.91	■■■□□ 2.7
PPM1F-208	ENST00000496143	TMEM2	Q9UHN6	1383 aa		31.91	■■■□□ 2.7
PPM1F-208	ENST00000496143	ADGRB3	O60242	1522 aa		31.9	■■■□□ 2.7
PPM1F-208	ENST00000496143	LTBP4	Q8N2S1	1624 aa		31.9	■■■□□ 2.7
PPM1F-208	ENST00000496143	TXNDC2	Q86VQ3	553 aa		31.89	■■■□□ 2.7
PPM1F-208	ENST00000496143	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.89	■■■□□ 2.7
PPM1F-208	ENST00000496143	IQGAP1	P46940	1657 aa		31.87	■■■□□ 2.69
PPM1F-208	ENST00000496143	TRIM52	Q96A61	297 aa		31.86	■■■□□ 2.69
PPM1F-208	ENST00000496143	LTK	P29376	864 aa		31.82	■■■□□ 2.68
PPM1F-208	ENST00000496143	IQSEC2	Q5JU85	1478 aa		31.82	■■■□□ 2.68
PPM1F-208	ENST00000496143	CHGA	P10645	457 aa	Known RBP	31.78	■■■□□ 2.68
PPM1F-208	ENST00000496143	HDGF	P51858	240 aa	Known RBP	31.78	■■■□□ 2.68
PPM1F-208	ENST00000496143	ACIN1	Q9UKV3	1341 aa	Known RBP	31.77	■■■□□ 2.68
PPM1F-208	ENST00000496143	CPS1	P31327	1500 aa		31.75	■■■□□ 2.67
PPM1F-208	ENST00000496143	TMEM131L	A2VDJ0	1609 aa		31.75	■■■□□ 2.67
PPM1F-208	ENST00000496143	SPHKAP	Q2M3C7	1700 aa		31.75	■■■□□ 2.67
PPM1F-208	ENST00000496143	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.74	■■■□□ 2.67
PPM1F-208	ENST00000496143	RIMS2	Q9UQ26	1411 aa		31.7	■■■□□ 2.67
PPM1F-208	ENST00000496143	PPP1R15A	O75807	674 aa	Predicted RBP	31.7	■■■□□ 2.67
PPM1F-208	ENST00000496143	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.7	■■■□□ 2.67
PPM1F-208	ENST00000496143	SETD5	Q9C0A6	1442 aa		31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms