RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
EPHA4-213ENST00000495693 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
EPHA4-213ENST00000495693 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
EPHA4-213ENST00000495693 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
EPHA4-213ENST00000495693 CASKIN1Q8WXD9 1431 aa12.87□□□□□ -0.35
EPHA4-213ENST00000495693 SNPHO15079 494 aa12.85□□□□□ -0.35
EPHA4-213ENST00000495693 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
EPHA4-213ENST00000495693 TMC2Q8TDI7 906 aa12.84□□□□□ -0.35
EPHA4-213ENST00000495693 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
EPHA4-213ENST00000495693 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
EPHA4-213ENST00000495693 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
EPHA4-213ENST00000495693 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
EPHA4-213ENST00000495693 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
EPHA4-213ENST00000495693 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
EPHA4-213ENST00000495693 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
EPHA4-213ENST00000495693 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
EPHA4-213ENST00000495693 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
EPHA4-213ENST00000495693 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
EPHA4-213ENST00000495693 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
EPHA4-213ENST00000495693 FOXK1P85037 733 aa12.79□□□□□ -0.36
EPHA4-213ENST00000495693 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
EPHA4-213ENST00000495693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
EPHA4-213ENST00000495693 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
EPHA4-213ENST00000495693 PDE4AP27815 886 aa12.78□□□□□ -0.36
EPHA4-213ENST00000495693 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
EPHA4-213ENST00000495693 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
EPHA4-213ENST00000495693 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.37
EPHA4-213ENST00000495693 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
EPHA4-213ENST00000495693 UGGT2Q9NYU1 1516 aa12.76□□□□□ -0.37
EPHA4-213ENST00000495693 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
EPHA4-213ENST00000495693 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
EPHA4-213ENST00000495693 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
EPHA4-213ENST00000495693 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
EPHA4-213ENST00000495693 MFSD10Q14728 455 aa12.74□□□□□ -0.37
EPHA4-213ENST00000495693 EHBP1L1Q8N3D4 1523 aa12.73□□□□□ -0.37
EPHA4-213ENST00000495693 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
EPHA4-213ENST00000495693 SLC34A2O95436 690 aa12.72□□□□□ -0.37
EPHA4-213ENST00000495693 DSG2Q14126 1118 aa12.72□□□□□ -0.37
EPHA4-213ENST00000495693 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
EPHA4-213ENST00000495693 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
EPHA4-213ENST00000495693 MTUS2Q5JR59 1369 aa12.7□□□□□ -0.38
EPHA4-213ENST00000495693 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
EPHA4-213ENST00000495693 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
EPHA4-213ENST00000495693 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
EPHA4-213ENST00000495693 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
EPHA4-213ENST00000495693 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
EPHA4-213ENST00000495693 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
EPHA4-213ENST00000495693 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
EPHA4-213ENST00000495693 ST18O60284 1047 aa12.68□□□□□ -0.38
EPHA4-213ENST00000495693 PPP1R15BQ5SWA1 713 aa12.68□□□□□ -0.38
EPHA4-213ENST00000495693 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
EPHA4-213ENST00000495693 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
EPHA4-213ENST00000495693 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
EPHA4-213ENST00000495693 ATP1B4Q9UN42 357 aaPredicted RBP12.67□□□□□ -0.38
EPHA4-213ENST00000495693 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
EPHA4-213ENST00000495693 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
EPHA4-213ENST00000495693 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
EPHA4-213ENST00000495693 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
EPHA4-213ENST00000495693 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
EPHA4-213ENST00000495693 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
EPHA4-213ENST00000495693 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
EPHA4-213ENST00000495693 NUP160Q12769 1436 aa12.62□□□□□ -0.39
EPHA4-213ENST00000495693 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
EPHA4-213ENST00000495693 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
EPHA4-213ENST00000495693 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
EPHA4-213ENST00000495693 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
EPHA4-213ENST00000495693 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
EPHA4-213ENST00000495693 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
EPHA4-213ENST00000495693 SETD5Q9C0A6 1442 aa12.61□□□□□ -0.39
EPHA4-213ENST00000495693 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
EPHA4-213ENST00000495693 DHX57Q6P158 1386 aaKnown RBP12.6□□□□□ -0.39
EPHA4-213ENST00000495693 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
EPHA4-213ENST00000495693 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
EPHA4-213ENST00000495693 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
EPHA4-213ENST00000495693 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
EPHA4-213ENST00000495693 DISP1Q96F81 1524 aa12.58□□□□□ -0.4
EPHA4-213ENST00000495693 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
EPHA4-213ENST00000495693 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
EPHA4-213ENST00000495693 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
EPHA4-213ENST00000495693 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
EPHA4-213ENST00000495693 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
EPHA4-213ENST00000495693 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
EPHA4-213ENST00000495693 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
EPHA4-213ENST00000495693 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
EPHA4-213ENST00000495693 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
EPHA4-213ENST00000495693 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
EPHA4-213ENST00000495693 TBC1D12O60347 775 aa12.53□□□□□ -0.4
EPHA4-213ENST00000495693 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
EPHA4-213ENST00000495693 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
EPHA4-213ENST00000495693 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
EPHA4-213ENST00000495693 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
EPHA4-213ENST00000495693 HFM1A2PYH4 1435 aa12.52□□□□□ -0.41
EPHA4-213ENST00000495693 HAP1P54257 671 aaPredicted RBP12.51□□□□□ -0.41
EPHA4-213ENST00000495693 POTEMA6NI47 508 aa12.5□□□□□ -0.41
EPHA4-213ENST00000495693 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
EPHA4-213ENST00000495693 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
EPHA4-213ENST00000495693 ITSN2Q9NZM3 1697 aa12.5□□□□□ -0.41
EPHA4-213ENST00000495693 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
EPHA4-213ENST00000495693 ITGAEP38570 1179 aa12.49□□□□□ -0.41
EPHA4-213ENST00000495693 EMP3P54852 163 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms