RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
SLC6A1-205ENST00000495636 MIA2Q96PC5 1412 aa25.33■■□□□ 1.65
SLC6A1-205ENST00000495636 MYOM3Q5VTT5 1437 aa25.32■■□□□ 1.64
SLC6A1-205ENST00000495636 MAST1Q9Y2H9 1570 aa25.31■■□□□ 1.64
SLC6A1-205ENST00000495636 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
SLC6A1-205ENST00000495636 A2ML1A8K2U0 1454 aa25.29■■□□□ 1.64
SLC6A1-205ENST00000495636 PZPP20742 1482 aa25.29■■□□□ 1.64
SLC6A1-205ENST00000495636 PKD2Q13563 968 aa25.29■■□□□ 1.64
SLC6A1-205ENST00000495636 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
SLC6A1-205ENST00000495636 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
SLC6A1-205ENST00000495636 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
SLC6A1-205ENST00000495636 TNRQ92752 1358 aa25.26■■□□□ 1.63
SLC6A1-205ENST00000495636 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.63
SLC6A1-205ENST00000495636 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
SLC6A1-205ENST00000495636 RNF17Q9BXT8 1623 aaKnown RBP25.24■■□□□ 1.63
SLC6A1-205ENST00000495636 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
SLC6A1-205ENST00000495636 EIF2AK4Q9P2K8 1649 aaKnown RBP25.22■■□□□ 1.63
SLC6A1-205ENST00000495636 APLP2Q06481 763 aa25.21■■□□□ 1.63
SLC6A1-205ENST00000495636 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
SLC6A1-205ENST00000495636 ABCC3O15438 1527 aa25.17■■□□□ 1.62
SLC6A1-205ENST00000495636 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
SLC6A1-205ENST00000495636 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
SLC6A1-205ENST00000495636 DUOX2Q9NRD8 1548 aa25.16■■□□□ 1.62
SLC6A1-205ENST00000495636 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
SLC6A1-205ENST00000495636 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
SLC6A1-205ENST00000495636 MROH1Q8NDA8 1641 aa25.14■■□□□ 1.61
SLC6A1-205ENST00000495636 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
SLC6A1-205ENST00000495636 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
SLC6A1-205ENST00000495636 ABCC5O15440 1437 aa25.12■■□□□ 1.61
SLC6A1-205ENST00000495636 SPATA31D1Q6ZQQ2 1576 aa25.1■■□□□ 1.61
SLC6A1-205ENST00000495636 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
SLC6A1-205ENST00000495636 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
SLC6A1-205ENST00000495636 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
SLC6A1-205ENST00000495636 THEMISQ8N1K5 641 aaPredicted RBP25.09■■□□□ 1.61
SLC6A1-205ENST00000495636 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
SLC6A1-205ENST00000495636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.08■■□□□ 1.61
SLC6A1-205ENST00000495636 DAPK1P53355 1430 aa25.08■■□□□ 1.61
SLC6A1-205ENST00000495636 ERBINQ96RT1 1412 aa25.08■■□□□ 1.61
SLC6A1-205ENST00000495636 ERVK-7P63135 1459 aa25.08■■□□□ 1.6
SLC6A1-205ENST00000495636 CEP152O94986 1710 aa25.06■■□□□ 1.6
SLC6A1-205ENST00000495636 ANKLE2Q86XL3 938 aa25.06■■□□□ 1.6
SLC6A1-205ENST00000495636 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
SLC6A1-205ENST00000495636 RRP7BPQ9NSQ0 103 aa25.03■■□□□ 1.6
SLC6A1-205ENST00000495636 DEPDC5O75140 1603 aa25.03■■□□□ 1.6
SLC6A1-205ENST00000495636 MED14O60244 1454 aa25.02■■□□□ 1.6
SLC6A1-205ENST00000495636 NPHP4O75161 1426 aaPredicted RBP25■■□□□ 1.59
SLC6A1-205ENST00000495636 ARHGAP31Q2M1Z3 1444 aa25■■□□□ 1.59
SLC6A1-205ENST00000495636 CPS1P31327 1500 aa25■■□□□ 1.59
SLC6A1-205ENST00000495636 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
SLC6A1-205ENST00000495636 ANKRD30AQ9BXX3 1397 aa24.98■■□□□ 1.59
SLC6A1-205ENST00000495636 CFAP65Q6ZU64 1925 aaKnown RBP24.95■■□□□ 1.58
SLC6A1-205ENST00000495636 VWDEQ8N2E2 1590 aa24.95■■□□□ 1.58
SLC6A1-205ENST00000495636 IQGAP1P46940 1657 aa24.94■■□□□ 1.58
SLC6A1-205ENST00000495636 KANK1Q14678 1352 aa24.94■■□□□ 1.58
SLC6A1-205ENST00000495636 UBR1Q8IWV7 1749 aa24.93■■□□□ 1.58
SLC6A1-205ENST00000495636 CHIC2Q9UKJ5 165 aa24.93■■□□□ 1.58
SLC6A1-205ENST00000495636 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
SLC6A1-205ENST00000495636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.58
SLC6A1-205ENST00000495636 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
SLC6A1-205ENST00000495636 LMTK2Q8IWU2 1503 aa24.9■■□□□ 1.58
SLC6A1-205ENST00000495636 SCAF11Q99590 1463 aaKnown RBP24.88■■□□□ 1.57
SLC6A1-205ENST00000495636 SLIT1O75093 1534 aa24.86■■□□□ 1.57
SLC6A1-205ENST00000495636 ARHGAP23Q9P227 1491 aa24.86■■□□□ 1.57
SLC6A1-205ENST00000495636 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
SLC6A1-205ENST00000495636 TOM1O60784 492 aa24.84■■□□□ 1.57
SLC6A1-205ENST00000495636 PIK3C2BO00750 1634 aa24.83■■□□□ 1.56
SLC6A1-205ENST00000495636 EFCAB6Q5THR3 1501 aa24.81■■□□□ 1.56
SLC6A1-205ENST00000495636 SYNMO15061 1565 aa24.8■■□□□ 1.56
SLC6A1-205ENST00000495636 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
SLC6A1-205ENST00000495636 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
SLC6A1-205ENST00000495636 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
SLC6A1-205ENST00000495636 LTKP29376 864 aa24.79■■□□□ 1.56
SLC6A1-205ENST00000495636 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
SLC6A1-205ENST00000495636 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
SLC6A1-205ENST00000495636 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
SLC6A1-205ENST00000495636 EID1Q9Y6B2 187 aa24.78■■□□□ 1.56
SLC6A1-205ENST00000495636 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
SLC6A1-205ENST00000495636 NOS1P29475 1434 aa24.78■■□□□ 1.56
SLC6A1-205ENST00000495636 PIP4K2BP78356 416 aa24.77■■□□□ 1.56
SLC6A1-205ENST00000495636 LRRC7Q96NW7 1537 aa24.76■■□□□ 1.55
SLC6A1-205ENST00000495636 IDI1Q13907 227 aa24.75■■□□□ 1.55
SLC6A1-205ENST00000495636 ILDR2Q71H61 639 aa24.75■■□□□ 1.55
SLC6A1-205ENST00000495636 RPRD2Q5VT52 1461 aaKnown RBP24.74■■□□□ 1.55
SLC6A1-205ENST00000495636 ALKQ9UM73 1620 aa24.73■■□□□ 1.55
SLC6A1-205ENST00000495636 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
SLC6A1-205ENST00000495636 HSPA1LP34931 641 aa24.71■■□□□ 1.55
SLC6A1-205ENST00000495636 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
SLC6A1-205ENST00000495636 TET3O43151 1660 aa24.69■■□□□ 1.54
SLC6A1-205ENST00000495636 ROCK1Q13464 1354 aa24.68■■□□□ 1.54
SLC6A1-205ENST00000495636 UNC13BO14795 1591 aa24.67■■□□□ 1.54
SLC6A1-205ENST00000495636 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.53
SLC6A1-205ENST00000495636 SOCS7O14512 581 aa24.63■■□□□ 1.53
SLC6A1-205ENST00000495636 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
SLC6A1-205ENST00000495636 XIRP1Q702N8 1843 aaKnown RBP24.59■■□□□ 1.53
SLC6A1-205ENST00000495636 KCNA6P17658 529 aa24.58■■□□□ 1.53
SLC6A1-205ENST00000495636 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
SLC6A1-205ENST00000495636 SLC26A8Q96RN1 970 aa24.57■■□□□ 1.52
SLC6A1-205ENST00000495636 ZFYVE9O95405 1425 aa24.56■■□□□ 1.52
SLC6A1-205ENST00000495636 E9PCH4 1651 aa24.56■■□□□ 1.52
SLC6A1-205ENST00000495636 TMEM131LA2VDJ0 1609 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms