RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SPATA31D1Q6ZQQ2 1576 aa28.11■■■□□ 2.09
TMEM53-209ENST00000495630 WASHC2CQ9Y4E1 1318 aa28.1■■■□□ 2.09
TMEM53-209ENST00000495630 TNRQ92752 1358 aa28.09■■■□□ 2.09
TMEM53-209ENST00000495630 TSPY4P0CV99 314 aa28.06■■■□□ 2.08
TMEM53-209ENST00000495630 TSPY10P0CW01 314 aa28.06■■■□□ 2.08
TMEM53-209ENST00000495630 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
TMEM53-209ENST00000495630 DNMT1P26358 1616 aaKnown RBP28.06■■■□□ 2.08
TMEM53-209ENST00000495630 THEMISQ8N1K5 641 aaPredicted RBP28.05■■■□□ 2.08
TMEM53-209ENST00000495630 ANKLE2Q86XL3 938 aa28.04■■■□□ 2.08
TMEM53-209ENST00000495630 PZPP20742 1482 aa28.03■■■□□ 2.08
TMEM53-209ENST00000495630 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
TMEM53-209ENST00000495630 FAM135AQ9P2D6 1515 aa28.02■■■□□ 2.08
TMEM53-209ENST00000495630 CAMSAP2Q08AD1 1489 aa28.01■■■□□ 2.07
TMEM53-209ENST00000495630 MIA2Q96PC5 1412 aa28.01■■■□□ 2.07
TMEM53-209ENST00000495630 TOM1O60784 492 aa28■■■□□ 2.07
TMEM53-209ENST00000495630 KDM5DQ9BY66 1539 aa27.99■■■□□ 2.07
TMEM53-209ENST00000495630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.96■■■□□ 2.07
TMEM53-209ENST00000495630 SHANK2Q9UPX8 1470 aa27.95■■■□□ 2.07
TMEM53-209ENST00000495630 NLRP1Q9C000 1473 aa27.95■■■□□ 2.06
TMEM53-209ENST00000495630 CPS1P31327 1500 aa27.94■■■□□ 2.06
TMEM53-209ENST00000495630 PIP4K2BP78356 416 aa27.92■■■□□ 2.06
TMEM53-209ENST00000495630 SCAF1Q9H7N4 1312 aaKnown RBP27.92■■■□□ 2.06
TMEM53-209ENST00000495630 ARHGEF5Q12774 1597 aa27.91■■■□□ 2.06
TMEM53-209ENST00000495630 HSPA1LP34931 641 aa27.91■■■□□ 2.06
TMEM53-209ENST00000495630 NEURL4Q96JN8 1562 aa27.9■■■□□ 2.06
TMEM53-209ENST00000495630 UGGT1Q9NYU2 1555 aa27.87■■■□□ 2.05
TMEM53-209ENST00000495630 MED14O60244 1454 aa27.87■■■□□ 2.05
TMEM53-209ENST00000495630 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
TMEM53-209ENST00000495630 POLR1AO95602 1720 aaPredicted RBP27.86■■■□□ 2.05
TMEM53-209ENST00000495630 LRRC9Q6ZRR7 1453 aa27.83■■■□□ 2.05
TMEM53-209ENST00000495630 DEPDC5O75140 1603 aa27.81■■■□□ 2.04
TMEM53-209ENST00000495630 VWDEQ8N2E2 1590 aa27.8■■■□□ 2.04
TMEM53-209ENST00000495630 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
TMEM53-209ENST00000495630 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
TMEM53-209ENST00000495630 ABCC3O15438 1527 aa27.77■■■□□ 2.04
TMEM53-209ENST00000495630 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
TMEM53-209ENST00000495630 RNF17Q9BXT8 1623 aaKnown RBP27.75■■■□□ 2.03
TMEM53-209ENST00000495630 LOC105371045A0A1W2PR82 267 aa27.75■■■□□ 2.03
TMEM53-209ENST00000495630 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
TMEM53-209ENST00000495630 MYOM3Q5VTT5 1437 aa27.73■■■□□ 2.03
TMEM53-209ENST00000495630 MAP3K1Q13233 1512 aa27.72■■■□□ 2.03
TMEM53-209ENST00000495630 ZC3H13Q5T200 1668 aaKnown RBP27.69■■■□□ 2.02
TMEM53-209ENST00000495630 EIF2AK4Q9P2K8 1649 aaKnown RBP27.69■■■□□ 2.02
TMEM53-209ENST00000495630 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
TMEM53-209ENST00000495630 MED1Q15648 1581 aaPredicted RBP27.68■■■□□ 2.02
TMEM53-209ENST00000495630 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
TMEM53-209ENST00000495630 TXNDC2Q86VQ3 553 aa27.67■■■□□ 2.02
TMEM53-209ENST00000495630 DUOX2Q9NRD8 1548 aa27.66■■■□□ 2.02
TMEM53-209ENST00000495630 LTKP29376 864 aa27.65■■■□□ 2.02
TMEM53-209ENST00000495630 ALKQ9UM73 1620 aa27.65■■■□□ 2.02
TMEM53-209ENST00000495630 MROH1Q8NDA8 1641 aa27.64■■■□□ 2.02
TMEM53-209ENST00000495630 RRP7BPQ9NSQ0 103 aa27.64■■■□□ 2.02
TMEM53-209ENST00000495630 ARHGAP31Q2M1Z3 1444 aa27.64■■■□□ 2.02
TMEM53-209ENST00000495630 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
TMEM53-209ENST00000495630 EID1Q9Y6B2 187 aa27.63■■■□□ 2.01
TMEM53-209ENST00000495630 SCAF11Q99590 1463 aaKnown RBP27.63■■■□□ 2.01
TMEM53-209ENST00000495630 KIF15Q9NS87 1388 aa27.62■■■□□ 2.01
TMEM53-209ENST00000495630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.59■■■□□ 2.01
TMEM53-209ENST00000495630 ARHGAP23Q9P227 1491 aa27.58■■■□□ 2.01
TMEM53-209ENST00000495630 ABCC5O15440 1437 aa27.58■■■□□ 2
TMEM53-209ENST00000495630 ERBINQ96RT1 1412 aa27.58■■■□□ 2
TMEM53-209ENST00000495630 STRCP1A6NGW2 1772 aa27.57■■■□□ 2
TMEM53-209ENST00000495630 SLIT1O75093 1534 aa27.57■■■□□ 2
TMEM53-209ENST00000495630 UBR1Q8IWV7 1749 aa27.56■■■□□ 2
TMEM53-209ENST00000495630 APLP2Q06481 763 aa27.56■■■□□ 2
TMEM53-209ENST00000495630 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
TMEM53-209ENST00000495630 SENP3Q9H4L4 574 aaPredicted RBP27.55■■■□□ 2
TMEM53-209ENST00000495630 STAG3Q9UJ98 1225 aa27.55■■■□□ 2
TMEM53-209ENST00000495630 SYNMO15061 1565 aa27.54■■■□□ 2
TMEM53-209ENST00000495630 CEP152O94986 1710 aa27.54■■■□□ 2
TMEM53-209ENST00000495630 KANK1Q14678 1352 aa27.54■■■□□ 2
TMEM53-209ENST00000495630 TMEM2Q9UHN6 1383 aa27.52■■■□□ 2
TMEM53-209ENST00000495630 PRDM15P57071 1507 aaPredicted RBP27.51■■■□□ 2
TMEM53-209ENST00000495630 IDI1Q13907 227 aa27.5■■□□□ 1.99
TMEM53-209ENST00000495630 DAPK1P53355 1430 aa27.48■■□□□ 1.99
TMEM53-209ENST00000495630 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
TMEM53-209ENST00000495630 KCNA6P17658 529 aa27.46■■□□□ 1.99
TMEM53-209ENST00000495630 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.98
TMEM53-209ENST00000495630 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
TMEM53-209ENST00000495630 FAM135BQ49AJ0 1406 aa27.43■■□□□ 1.98
TMEM53-209ENST00000495630 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
TMEM53-209ENST00000495630 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
TMEM53-209ENST00000495630 SLC52A1Q9NWF4 448 aa27.4■■□□□ 1.98
TMEM53-209ENST00000495630 PIK3C2BO00750 1634 aa27.4■■□□□ 1.98
TMEM53-209ENST00000495630 TMEM94Q12767 1356 aa27.39■■□□□ 1.98
TMEM53-209ENST00000495630 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
TMEM53-209ENST00000495630 SLC26A8Q96RN1 970 aa27.39■■□□□ 1.98
TMEM53-209ENST00000495630 RGS17Q9UGC6 210 aaPredicted RBP27.39■■□□□ 1.98
TMEM53-209ENST00000495630 CROCC2H7BZ55 1655 aa27.39■■□□□ 1.97
TMEM53-209ENST00000495630 EFCAB6Q5THR3 1501 aa27.38■■□□□ 1.97
TMEM53-209ENST00000495630 NOS1P29475 1434 aa27.36■■□□□ 1.97
TMEM53-209ENST00000495630 KDM5AP29375 1690 aaKnown RBP27.35■■□□□ 1.97
TMEM53-209ENST00000495630 TET3O43151 1660 aa27.33■■□□□ 1.97
TMEM53-209ENST00000495630 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
TMEM53-209ENST00000495630 HDGFP51858 240 aaKnown RBP27.31■■□□□ 1.96
TMEM53-209ENST00000495630 BCANQ96GW7 911 aa27.31■■□□□ 1.96
TMEM53-209ENST00000495630 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
TMEM53-209ENST00000495630 ADGRL2O95490 1459 aa27.25■■□□□ 1.95
TMEM53-209ENST00000495630 FAM50AQ14320 339 aaKnown RBP27.25■■□□□ 1.95
TMEM53-209ENST00000495630 SLAIN2Q9P270 581 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms