RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EIF2AK4Q9P2K8 1649 aaKnown RBP18.3■□□□□ 0.52
CSNK1E-213ENST00000495232 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
CSNK1E-213ENST00000495232 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
CSNK1E-213ENST00000495232 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
CSNK1E-213ENST00000495232 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
CSNK1E-213ENST00000495232 RNF17Q9BXT8 1623 aaKnown RBP18.23■□□□□ 0.51
CSNK1E-213ENST00000495232 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
CSNK1E-213ENST00000495232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSNK1E-213ENST00000495232 KANK1Q14678 1352 aa18.21■□□□□ 0.51
CSNK1E-213ENST00000495232 KDM5DQ9BY66 1539 aa18.21■□□□□ 0.51
CSNK1E-213ENST00000495232 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
CSNK1E-213ENST00000495232 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
CSNK1E-213ENST00000495232 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
CSNK1E-213ENST00000495232 CEBPAP49715 358 aaPredicted RBP18.2■□□□□ 0.5
CSNK1E-213ENST00000495232 C3P01024 1663 aa18.18■□□□□ 0.5
CSNK1E-213ENST00000495232 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
CSNK1E-213ENST00000495232 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
CSNK1E-213ENST00000495232 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
CSNK1E-213ENST00000495232 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
CSNK1E-213ENST00000495232 ABCC3O15438 1527 aa18.14■□□□□ 0.49
CSNK1E-213ENST00000495232 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
CSNK1E-213ENST00000495232 CEP152O94986 1710 aa18.13■□□□□ 0.49
CSNK1E-213ENST00000495232 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
CSNK1E-213ENST00000495232 NAIPQ13075 1403 aa18.13■□□□□ 0.49
CSNK1E-213ENST00000495232 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-213ENST00000495232 NPATQ14207 1427 aa18.1■□□□□ 0.49
CSNK1E-213ENST00000495232 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
CSNK1E-213ENST00000495232 UNC13BO14795 1591 aa18.09■□□□□ 0.49
CSNK1E-213ENST00000495232 PZPP20742 1482 aa18.09■□□□□ 0.49
CSNK1E-213ENST00000495232 NUP155O75694 1391 aa18.08■□□□□ 0.49
CSNK1E-213ENST00000495232 PREX1Q8TCU6 1659 aa18.08■□□□□ 0.48
CSNK1E-213ENST00000495232 UHRF1BP1Q6BDS2 1440 aa18.07■□□□□ 0.48
CSNK1E-213ENST00000495232 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
CSNK1E-213ENST00000495232 LMTK2Q8IWU2 1503 aa18.07■□□□□ 0.48
CSNK1E-213ENST00000495232 FBXO31Q5XUX0 539 aaPredicted RBP18.06■□□□□ 0.48
CSNK1E-213ENST00000495232 TRIM52Q96A61 297 aa18.06■□□□□ 0.48
CSNK1E-213ENST00000495232 ARHGAP31Q2M1Z3 1444 aa18.04■□□□□ 0.48
CSNK1E-213ENST00000495232 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
CSNK1E-213ENST00000495232 TNRQ92752 1358 aa18.04■□□□□ 0.48
CSNK1E-213ENST00000495232 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
CSNK1E-213ENST00000495232 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
CSNK1E-213ENST00000495232 LMTK3Q96Q04 1460 aa18.02■□□□□ 0.48
CSNK1E-213ENST00000495232 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
CSNK1E-213ENST00000495232 TET3O43151 1660 aa18.02■□□□□ 0.47
CSNK1E-213ENST00000495232 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
CSNK1E-213ENST00000495232 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
CSNK1E-213ENST00000495232 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
CSNK1E-213ENST00000495232 RPRD2Q5VT52 1461 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-213ENST00000495232 SPATA31D1Q6ZQQ2 1576 aa17.99■□□□□ 0.47
CSNK1E-213ENST00000495232 HSPA2P54652 639 aa17.97■□□□□ 0.47
CSNK1E-213ENST00000495232 NLRP1Q9C000 1473 aa17.96■□□□□ 0.47
CSNK1E-213ENST00000495232 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
CSNK1E-213ENST00000495232 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
CSNK1E-213ENST00000495232 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.46
CSNK1E-213ENST00000495232 RAB3GAP2Q9H2M9 1393 aa17.95■□□□□ 0.46
CSNK1E-213ENST00000495232 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
CSNK1E-213ENST00000495232 E9PCH4 1651 aa17.94■□□□□ 0.46
CSNK1E-213ENST00000495232 ZNF142P52746 1687 aaPredicted RBP17.94■□□□□ 0.46
CSNK1E-213ENST00000495232 THEMISQ8N1K5 641 aaPredicted RBP17.92■□□□□ 0.46
CSNK1E-213ENST00000495232 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
CSNK1E-213ENST00000495232 NOS1P29475 1434 aa17.91■□□□□ 0.46
CSNK1E-213ENST00000495232 PKD2Q13563 968 aa17.91■□□□□ 0.46
CSNK1E-213ENST00000495232 SLC52A1Q9NWF4 448 aa17.91■□□□□ 0.46
CSNK1E-213ENST00000495232 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
CSNK1E-213ENST00000495232 HRCP23327 699 aa17.89■□□□□ 0.45
CSNK1E-213ENST00000495232 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
CSNK1E-213ENST00000495232 SYNMO15061 1565 aa17.88■□□□□ 0.45
CSNK1E-213ENST00000495232 IDI1Q13907 227 aa17.88■□□□□ 0.45
CSNK1E-213ENST00000495232 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
CSNK1E-213ENST00000495232 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CSNK1E-213ENST00000495232 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
CSNK1E-213ENST00000495232 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
CSNK1E-213ENST00000495232 PLA2R1Q13018 1463 aa17.84■□□□□ 0.45
CSNK1E-213ENST00000495232 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
CSNK1E-213ENST00000495232 PTPRTO14522 1441 aa17.82■□□□□ 0.44
CSNK1E-213ENST00000495232 FOXD1Q16676 465 aa17.82■□□□□ 0.44
CSNK1E-213ENST00000495232 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
CSNK1E-213ENST00000495232 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
CSNK1E-213ENST00000495232 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
CSNK1E-213ENST00000495232 ADGRB3O60242 1522 aa17.81■□□□□ 0.44
CSNK1E-213ENST00000495232 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
CSNK1E-213ENST00000495232 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
CSNK1E-213ENST00000495232 TRPM2O94759 1503 aa17.8■□□□□ 0.44
CSNK1E-213ENST00000495232 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-213ENST00000495232 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-213ENST00000495232 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.43
CSNK1E-213ENST00000495232 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
CSNK1E-213ENST00000495232 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
CSNK1E-213ENST00000495232 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 ZNF326Q5BKZ1 582 aaKnown RBP17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 SLIT1O75093 1534 aa17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 KIF1BO60333 1816 aa17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 MYO5BQ9ULV0 1848 aa17.75■□□□□ 0.43
CSNK1E-213ENST00000495232 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
CSNK1E-213ENST00000495232 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
CSNK1E-213ENST00000495232 ARHGAP23Q9P227 1491 aa17.73■□□□□ 0.43
CSNK1E-213ENST00000495232 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
CSNK1E-213ENST00000495232 LTKP29376 864 aa17.71■□□□□ 0.43
CSNK1E-213ENST00000495232 BCANQ96GW7 911 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms