RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 NCKAP5LQ9HCH0 1330 aa31.3■■■□□ 2.6
HDGF-209ENST00000495212 KDM5DQ9BY66 1539 aa31.29■■■□□ 2.6
HDGF-209ENST00000495212 PTPRTO14522 1441 aa31.29■■■□□ 2.6
HDGF-209ENST00000495212 ZNF142P52746 1687 aaPredicted RBP31.29■■■□□ 2.6
HDGF-209ENST00000495212 WASHC2CQ9Y4E1 1318 aa31.28■■■□□ 2.6
HDGF-209ENST00000495212 PTPN23Q9H3S7 1636 aa31.28■■■□□ 2.6
HDGF-209ENST00000495212 CEP170BQ9Y4F5 1589 aaPredicted RBP31.28■■■□□ 2.6
HDGF-209ENST00000495212 ABCC5O15440 1437 aa31.24■■■□□ 2.59
HDGF-209ENST00000495212 PZPP20742 1482 aa31.21■■■□□ 2.59
HDGF-209ENST00000495212 RNF17Q9BXT8 1623 aaKnown RBP31.2■■■□□ 2.59
HDGF-209ENST00000495212 TNRQ92752 1358 aa31.2■■■□□ 2.59
HDGF-209ENST00000495212 CROCC2H7BZ55 1655 aa31.2■■■□□ 2.59
HDGF-209ENST00000495212 FGD6Q6ZV73 1430 aa31.2■■■□□ 2.59
HDGF-209ENST00000495212 DNMT1P26358 1616 aaKnown RBP31.18■■■□□ 2.58
HDGF-209ENST00000495212 A2ML1A8K2U0 1454 aa31.18■■■□□ 2.58
HDGF-209ENST00000495212 FAM135AQ9P2D6 1515 aa31.18■■■□□ 2.58
HDGF-209ENST00000495212 RRP7BPQ9NSQ0 103 aa31.17■■■□□ 2.58
HDGF-209ENST00000495212 MROH1Q8NDA8 1641 aa31.16■■■□□ 2.58
HDGF-209ENST00000495212 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
HDGF-209ENST00000495212 DAPK1P53355 1430 aa31.15■■■□□ 2.58
HDGF-209ENST00000495212 TCOF1Q13428 1488 aaKnown RBP31.15■■■□□ 2.58
HDGF-209ENST00000495212 ABCC3O15438 1527 aa31.15■■■□□ 2.58
HDGF-209ENST00000495212 DUOX2Q9NRD8 1548 aa31.14■■■□□ 2.58
HDGF-209ENST00000495212 LTBP4Q8N2S1 1624 aa31.14■■■□□ 2.58
HDGF-209ENST00000495212 CHIC2Q9UKJ5 165 aa31.14■■■□□ 2.58
HDGF-209ENST00000495212 KIF15Q9NS87 1388 aa31.14■■■□□ 2.58
HDGF-209ENST00000495212 PLA2R1Q13018 1463 aa31.14■■■□□ 2.57
HDGF-209ENST00000495212 CEP152O94986 1710 aa31.13■■■□□ 2.57
HDGF-209ENST00000495212 SHANK2Q9UPX8 1470 aa31.12■■■□□ 2.57
HDGF-209ENST00000495212 CFAP65Q6ZU64 1925 aaKnown RBP31.12■■■□□ 2.57
HDGF-209ENST00000495212 PKD2Q13563 968 aa31.1■■■□□ 2.57
HDGF-209ENST00000495212 ZNF335Q9H4Z2 1342 aaPredicted RBP31.08■■■□□ 2.57
HDGF-209ENST00000495212 ZC3H13Q5T200 1668 aaKnown RBP31.08■■■□□ 2.57
HDGF-209ENST00000495212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.04■■■□□ 2.566e-11■■■□□ 14.7
HDGF-209ENST00000495212 FAM50AQ14320 339 aaKnown RBP31.03■■■□□ 2.56
HDGF-209ENST00000495212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.03■■■□□ 2.562e-6■■□□□ 12.6
HDGF-209ENST00000495212 ERBINQ96RT1 1412 aa31.01■■■□□ 2.55
HDGF-209ENST00000495212 ERVK-7P63135 1459 aa31.01■■■□□ 2.55
HDGF-209ENST00000495212 SPATA31D1Q6ZQQ2 1576 aa31■■■□□ 2.55
HDGF-209ENST00000495212 POLR1AO95602 1720 aaPredicted RBP31■■■□□ 2.55
HDGF-209ENST00000495212 NLRP1Q9C000 1473 aa31■■■□□ 2.55
HDGF-209ENST00000495212 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
HDGF-209ENST00000495212 UGGT1Q9NYU2 1555 aa30.99■■■□□ 2.55
HDGF-209ENST00000495212 PRDM15P57071 1507 aaPredicted RBP30.98■■■□□ 2.55
HDGF-209ENST00000495212 ANKRD30AQ9BXX3 1397 aa30.97■■■□□ 2.55
HDGF-209ENST00000495212 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
HDGF-209ENST00000495212 THEMISQ8N1K5 641 aaPredicted RBP30.95■■■□□ 2.55
HDGF-209ENST00000495212 DEPDC5O75140 1603 aa30.94■■■□□ 2.54
HDGF-209ENST00000495212 ANKLE2Q86XL3 938 aa30.91■■■□□ 2.54
HDGF-209ENST00000495212 ADGRL2O95490 1459 aa30.88■■■□□ 2.53
HDGF-209ENST00000495212 ARHGAP31Q2M1Z3 1444 aa30.86■■■□□ 2.53
HDGF-209ENST00000495212 IQSEC2Q5JU85 1478 aa30.86■■■□□ 2.53
HDGF-209ENST00000495212 UBR1Q8IWV7 1749 aa30.85■■■□□ 2.53
HDGF-209ENST00000495212 KANK1Q14678 1352 aa30.85■■■□□ 2.53
HDGF-209ENST00000495212 NPHP4O75161 1426 aaPredicted RBP30.83■■■□□ 2.53
HDGF-209ENST00000495212 VWDEQ8N2E2 1590 aa30.83■■■□□ 2.53
HDGF-209ENST00000495212 MED14O60244 1454 aa30.79■■■□□ 2.52
HDGF-209ENST00000495212 LMTK2Q8IWU2 1503 aa30.78■■■□□ 2.52
HDGF-209ENST00000495212 IQGAP1P46940 1657 aa30.78■■■□□ 2.52
HDGF-209ENST00000495212 UBAP1LF5GYI3 381 aa30.77■■■□□ 2.52
HDGF-209ENST00000495212 ANKRD50Q9ULJ7 1429 aa30.77■■■□□ 2.52
HDGF-209ENST00000495212 PIK3C2BO00750 1634 aa30.76■■■□□ 2.52
HDGF-209ENST00000495212 LTKP29376 864 aa30.74■■■□□ 2.51
HDGF-209ENST00000495212 ITGAEP38570 1179 aa30.74■■■□□ 2.51
HDGF-209ENST00000495212 SYNMO15061 1565 aa30.71■■■□□ 2.51
HDGF-209ENST00000495212 IDI1Q13907 227 aa30.71■■■□□ 2.51
HDGF-209ENST00000495212 EFCAB6Q5THR3 1501 aa30.71■■■□□ 2.51
HDGF-209ENST00000495212 STRCP1A6NGW2 1772 aa30.7■■■□□ 2.51
HDGF-209ENST00000495212 TXNDC2Q86VQ3 553 aa30.7■■■□□ 2.51
HDGF-209ENST00000495212 CPS1P31327 1500 aa30.69■■■□□ 2.5
HDGF-209ENST00000495212 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
HDGF-209ENST00000495212 ARHGAP23Q9P227 1491 aa30.69■■■□□ 2.5
HDGF-209ENST00000495212 STAG3Q9UJ98 1225 aa30.67■■■□□ 2.5
HDGF-209ENST00000495212 SLIT1O75093 1534 aa30.67■■■□□ 2.5
HDGF-209ENST00000495212 NOS1P29475 1434 aa30.65■■■□□ 2.5
HDGF-209ENST00000495212 ROCK1Q13464 1354 aa30.61■■■□□ 2.49
HDGF-209ENST00000495212 TMEM2Q9UHN6 1383 aa30.61■■■□□ 2.49
HDGF-209ENST00000495212 UNC13BO14795 1591 aa30.61■■■□□ 2.49
HDGF-209ENST00000495212 TET3O43151 1660 aa30.6■■■□□ 2.49
HDGF-209ENST00000495212 PIP4K2BP78356 416 aa30.6■■■□□ 2.49
HDGF-209ENST00000495212 SCAF1Q9H7N4 1312 aaKnown RBP30.59■■■□□ 2.49
HDGF-209ENST00000495212 EID1Q9Y6B2 187 aa30.59■■■□□ 2.49
HDGF-209ENST00000495212 SENP3Q9H4L4 574 aaPredicted RBP30.55■■■□□ 2.48
HDGF-209ENST00000495212 ADGRB3O60242 1522 aa30.55■■■□□ 2.48
HDGF-209ENST00000495212 LRRC7Q96NW7 1537 aa30.55■■■□□ 2.48
HDGF-209ENST00000495212 KDM5AP29375 1690 aaKnown RBP30.55■■■□□ 2.48
HDGF-209ENST00000495212 GCC2Q8IWJ2 1684 aa30.55■■■□□ 2.48
HDGF-209ENST00000495212 MYO5BQ9ULV0 1848 aa30.54■■■□□ 2.48
HDGF-209ENST00000495212 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
HDGF-209ENST00000495212 RPRD2Q5VT52 1461 aaKnown RBP30.53■■■□□ 2.48
HDGF-209ENST00000495212 E9PCH4 1651 aa30.52■■■□□ 2.48
HDGF-209ENST00000495212 TOM1O60784 492 aa30.52■■■□□ 2.48
HDGF-209ENST00000495212 SLC52A1Q9NWF4 448 aa30.52■■■□□ 2.48
HDGF-209ENST00000495212 ALKQ9UM73 1620 aa30.51■■■□□ 2.48
HDGF-209ENST00000495212 IQGAP3Q86VI3 1631 aa30.48■■■□□ 2.47
HDGF-209ENST00000495212 SLC26A8Q96RN1 970 aa30.48■■■□□ 2.47
HDGF-209ENST00000495212 NUP155O75694 1391 aa30.48■■■□□ 2.47
HDGF-209ENST00000495212 HSPA1LP34931 641 aa30.46■■■□□ 2.47
HDGF-209ENST00000495212 CHGAP10645 457 aaKnown RBP30.44■■■□□ 2.46
HDGF-209ENST00000495212 XIRP1Q702N8 1843 aaKnown RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms