RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
SCAP-213ENST00000494938 FBXO31Q5XUX0 539 aaPredicted RBP22.01■■□□□ 1.11
SCAP-213ENST00000494938 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
SCAP-213ENST00000494938 C3P01024 1663 aa22.01■■□□□ 1.11
SCAP-213ENST00000494938 NPATQ14207 1427 aa22■■□□□ 1.11
SCAP-213ENST00000494938 ERBINQ96RT1 1412 aa21.99■■□□□ 1.11
SCAP-213ENST00000494938 ITGAEP38570 1179 aa21.99■■□□□ 1.11
SCAP-213ENST00000494938 CROCC2H7BZ55 1655 aa21.98■■□□□ 1.11
SCAP-213ENST00000494938 CLTCQ00610 1675 aaKnown RBP21.98■■□□□ 1.11
SCAP-213ENST00000494938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.97■■□□□ 1.11
SCAP-213ENST00000494938 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
SCAP-213ENST00000494938 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
SCAP-213ENST00000494938 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
SCAP-213ENST00000494938 KDM5DQ9BY66 1539 aa21.95■■□□□ 1.1
SCAP-213ENST00000494938 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
SCAP-213ENST00000494938 FAM135AQ9P2D6 1515 aa21.94■■□□□ 1.1
SCAP-213ENST00000494938 RNF17Q9BXT8 1623 aaKnown RBP21.94■■□□□ 1.1
SCAP-213ENST00000494938 EIF2AK4Q9P2K8 1649 aaKnown RBP21.93■■□□□ 1.1
SCAP-213ENST00000494938 SETD1BQ9UPS6 1966 aaKnown RBP21.92■■□□□ 1.1
SCAP-213ENST00000494938 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
SCAP-213ENST00000494938 ABCC3O15438 1527 aa21.91■■□□□ 1.1
SCAP-213ENST00000494938 ANKRD50Q9ULJ7 1429 aa21.91■■□□□ 1.1
SCAP-213ENST00000494938 PZPP20742 1482 aa21.9■■□□□ 1.1
SCAP-213ENST00000494938 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
SCAP-213ENST00000494938 TNRQ92752 1358 aa21.87■■□□□ 1.09
SCAP-213ENST00000494938 KANK1Q14678 1352 aa21.86■■□□□ 1.09
SCAP-213ENST00000494938 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
SCAP-213ENST00000494938 ARHGAP31Q2M1Z3 1444 aa21.83■■□□□ 1.09
SCAP-213ENST00000494938 DEPDC5O75140 1603 aa21.8■■□□□ 1.08
SCAP-213ENST00000494938 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
SCAP-213ENST00000494938 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
SCAP-213ENST00000494938 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
SCAP-213ENST00000494938 LMTK2Q8IWU2 1503 aa21.79■■□□□ 1.08
SCAP-213ENST00000494938 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
SCAP-213ENST00000494938 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
SCAP-213ENST00000494938 ZC3H13Q5T200 1668 aaKnown RBP21.77■■□□□ 1.08
SCAP-213ENST00000494938 SPATA31D1Q6ZQQ2 1576 aa21.75■■□□□ 1.07
SCAP-213ENST00000494938 CEP170BQ9Y4F5 1589 aaPredicted RBP21.75■■□□□ 1.07
SCAP-213ENST00000494938 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
SCAP-213ENST00000494938 MYO3AQ8NEV4 1616 aa21.75■■□□□ 1.07
SCAP-213ENST00000494938 NLRP1Q9C000 1473 aa21.75■■□□□ 1.07
SCAP-213ENST00000494938 CAMSAP1Q5T5Y3 1602 aa21.73■■□□□ 1.07
SCAP-213ENST00000494938 NAIPQ13075 1403 aa21.73■■□□□ 1.07
SCAP-213ENST00000494938 CEP152O94986 1710 aa21.73■■□□□ 1.07
SCAP-213ENST00000494938 PKD2Q13563 968 aa21.73■■□□□ 1.07
SCAP-213ENST00000494938 NUP155O75694 1391 aa21.73■■□□□ 1.07
SCAP-213ENST00000494938 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
SCAP-213ENST00000494938 PTPRTO14522 1441 aa21.72■■□□□ 1.07
SCAP-213ENST00000494938 IDI1Q13907 227 aa21.71■■□□□ 1.07
SCAP-213ENST00000494938 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
SCAP-213ENST00000494938 NOS1P29475 1434 aa21.69■■□□□ 1.06
SCAP-213ENST00000494938 ZNF142P52746 1687 aaPredicted RBP21.68■■□□□ 1.06
SCAP-213ENST00000494938 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
SCAP-213ENST00000494938 UNC13BO14795 1591 aa21.66■■□□□ 1.06
SCAP-213ENST00000494938 EFCAB6Q5THR3 1501 aa21.66■■□□□ 1.06
SCAP-213ENST00000494938 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
SCAP-213ENST00000494938 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
SCAP-213ENST00000494938 SLC52A1Q9NWF4 448 aa21.65■■□□□ 1.06
SCAP-213ENST00000494938 RPRD2Q5VT52 1461 aaKnown RBP21.63■■□□□ 1.05
SCAP-213ENST00000494938 LTKP29376 864 aa21.6■■□□□ 1.05
SCAP-213ENST00000494938 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
SCAP-213ENST00000494938 CERKQ8TCT0 537 aa21.59■■□□□ 1.05
SCAP-213ENST00000494938 TRIM52Q96A61 297 aa21.59■■□□□ 1.05
SCAP-213ENST00000494938 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
SCAP-213ENST00000494938 SYNMO15061 1565 aa21.58■■□□□ 1.05
SCAP-213ENST00000494938 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
SCAP-213ENST00000494938 TET3O43151 1660 aa21.57■■□□□ 1.04
SCAP-213ENST00000494938 TXNDC2Q86VQ3 553 aa21.57■■□□□ 1.04
SCAP-213ENST00000494938 ILDR1Q86SU0 546 aaPredicted RBP21.56■■□□□ 1.04
SCAP-213ENST00000494938 TMEM2Q9UHN6 1383 aa21.55■■□□□ 1.04
SCAP-213ENST00000494938 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
SCAP-213ENST00000494938 MED14O60244 1454 aa21.54■■□□□ 1.04
SCAP-213ENST00000494938 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
SCAP-213ENST00000494938 EID1Q9Y6B2 187 aa21.53■■□□□ 1.04
SCAP-213ENST00000494938 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
SCAP-213ENST00000494938 NEURL4Q96JN8 1562 aa21.52■■□□□ 1.04
SCAP-213ENST00000494938 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
SCAP-213ENST00000494938 SLIT1O75093 1534 aa21.51■■□□□ 1.03
SCAP-213ENST00000494938 SLC4A1APQ9BWU0 796 aaKnown RBP21.51■■□□□ 1.03
SCAP-213ENST00000494938 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
SCAP-213ENST00000494938 E9PCH4 1651 aa21.5■■□□□ 1.03
SCAP-213ENST00000494938 GCC2Q8IWJ2 1684 aa21.5■■□□□ 1.03
SCAP-213ENST00000494938 SETD5Q9C0A6 1442 aa21.49■■□□□ 1.03
SCAP-213ENST00000494938 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
SCAP-213ENST00000494938 FBXO41Q8TF61 875 aa21.49■■□□□ 1.03
SCAP-213ENST00000494938 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
SCAP-213ENST00000494938 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
SCAP-213ENST00000494938 MPHOSPH9Q99550 1183 aa21.46■■□□□ 1.03
SCAP-213ENST00000494938 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
SCAP-213ENST00000494938 FOXD1Q16676 465 aa21.44■■□□□ 1.02
SCAP-213ENST00000494938 KDM5AP29375 1690 aaKnown RBP21.42■■□□□ 1.02
SCAP-213ENST00000494938 HDGFP51858 240 aaKnown RBP21.42■■□□□ 1.02
SCAP-213ENST00000494938 ZFYVE9O95405 1425 aa21.41■■□□□ 1.02
SCAP-213ENST00000494938 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
SCAP-213ENST00000494938 RAB3GAP2Q9H2M9 1393 aa21.41■■□□□ 1.02
SCAP-213ENST00000494938 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
SCAP-213ENST00000494938 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
SCAP-213ENST00000494938 TMEM131LA2VDJ0 1609 aa21.4■■□□□ 1.02
SCAP-213ENST00000494938 NUTM2DQ5VT03 806 aaPredicted RBP21.39■■□□□ 1.01
SCAP-213ENST00000494938 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms