RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
CCSER2-208ENST00000494586 NUP155O75694 1391 aa13.47□□□□□ -0.25
CCSER2-208ENST00000494586 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
CCSER2-208ENST00000494586 KANK1Q14678 1352 aa13.46□□□□□ -0.25
CCSER2-208ENST00000494586 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
CCSER2-208ENST00000494586 FAM135AQ9P2D6 1515 aa13.46□□□□□ -0.25
CCSER2-208ENST00000494586 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
CCSER2-208ENST00000494586 UNC13BO14795 1591 aa13.45□□□□□ -0.26
CCSER2-208ENST00000494586 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
CCSER2-208ENST00000494586 RNF17Q9BXT8 1623 aaKnown RBP13.45□□□□□ -0.26
CCSER2-208ENST00000494586 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
CCSER2-208ENST00000494586 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
CCSER2-208ENST00000494586 GGT6Q6P531 493 aa13.44□□□□□ -0.26
CCSER2-208ENST00000494586 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
CCSER2-208ENST00000494586 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
CCSER2-208ENST00000494586 PZPP20742 1482 aa13.42□□□□□ -0.26
CCSER2-208ENST00000494586 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
CCSER2-208ENST00000494586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.269e-8■■■■□ 19.8
CCSER2-208ENST00000494586 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
CCSER2-208ENST00000494586 ARHGAP31Q2M1Z3 1444 aa13.4□□□□□ -0.26
CCSER2-208ENST00000494586 IQGAP3Q86VI3 1631 aa13.4□□□□□ -0.26
CCSER2-208ENST00000494586 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
CCSER2-208ENST00000494586 PKD2Q13563 968 aa13.39□□□□□ -0.27
CCSER2-208ENST00000494586 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
CCSER2-208ENST00000494586 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
CCSER2-208ENST00000494586 SIGLEC1Q9BZZ2 1709 aa13.37□□□□□ -0.27
CCSER2-208ENST00000494586 ABCC3O15438 1527 aa13.36□□□□□ -0.27
CCSER2-208ENST00000494586 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
CCSER2-208ENST00000494586 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
CCSER2-208ENST00000494586 ZC3H13Q5T200 1668 aaKnown RBP13.35□□□□□ -0.27
CCSER2-208ENST00000494586 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
CCSER2-208ENST00000494586 PTPRTO14522 1441 aa13.35□□□□□ -0.27
CCSER2-208ENST00000494586 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
CCSER2-208ENST00000494586 TET3O43151 1660 aa13.34□□□□□ -0.27
CCSER2-208ENST00000494586 ZMYM3Q14202 1370 aa13.33□□□□□ -0.27
CCSER2-208ENST00000494586 MLECQ14165 292 aa13.33□□□□□ -0.28
CCSER2-208ENST00000494586 NPATQ14207 1427 aa13.32□□□□□ -0.28
CCSER2-208ENST00000494586 EFCAB6Q5THR3 1501 aa13.32□□□□□ -0.28
CCSER2-208ENST00000494586 NOS1P29475 1434 aa13.3□□□□□ -0.28
CCSER2-208ENST00000494586 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
CCSER2-208ENST00000494586 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
CCSER2-208ENST00000494586 FOXD1Q16676 465 aa13.29□□□□□ -0.28
CCSER2-208ENST00000494586 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
CCSER2-208ENST00000494586 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
CCSER2-208ENST00000494586 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
CCSER2-208ENST00000494586 E9PCH4 1651 aa13.28□□□□□ -0.28
CCSER2-208ENST00000494586 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
CCSER2-208ENST00000494586 CEP152O94986 1710 aa13.25□□□□□ -0.29
CCSER2-208ENST00000494586 TRPM2O94759 1503 aa13.25□□□□□ -0.29
CCSER2-208ENST00000494586 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
CCSER2-208ENST00000494586 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
CCSER2-208ENST00000494586 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
CCSER2-208ENST00000494586 CCDC144AA2RUR9 1427 aa13.24□□□□□ -0.29
CCSER2-208ENST00000494586 FBXO31Q5XUX0 539 aaPredicted RBP13.24□□□□□ -0.29
CCSER2-208ENST00000494586 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
CCSER2-208ENST00000494586 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
CCSER2-208ENST00000494586 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
CCSER2-208ENST00000494586 IDI1Q13907 227 aa13.22□□□□□ -0.29
CCSER2-208ENST00000494586 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
CCSER2-208ENST00000494586 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
CCSER2-208ENST00000494586 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
CCSER2-208ENST00000494586 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
CCSER2-208ENST00000494586 PREX1Q8TCU6 1659 aa13.19□□□□□ -0.3
CCSER2-208ENST00000494586 PTPRMP28827 1452 aa13.19□□□□□ -0.3
CCSER2-208ENST00000494586 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
CCSER2-208ENST00000494586 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CCSER2-208ENST00000494586 TNRQ92752 1358 aa13.19□□□□□ -0.3
CCSER2-208ENST00000494586 RPGRIP1LQ68CZ1 1315 aa13.18□□□□□ -0.3
CCSER2-208ENST00000494586 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
CCSER2-208ENST00000494586 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
CCSER2-208ENST00000494586 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
CCSER2-208ENST00000494586 SYNMO15061 1565 aa13.17□□□□□ -0.3
CCSER2-208ENST00000494586 C3P01024 1663 aa13.17□□□□□ -0.3
CCSER2-208ENST00000494586 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
CCSER2-208ENST00000494586 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
CCSER2-208ENST00000494586 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
CCSER2-208ENST00000494586 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
CCSER2-208ENST00000494586 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
CCSER2-208ENST00000494586 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
CCSER2-208ENST00000494586 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
CCSER2-208ENST00000494586 KDM5AP29375 1690 aaKnown RBP13.13□□□□□ -0.31
CCSER2-208ENST00000494586 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
CCSER2-208ENST00000494586 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
CCSER2-208ENST00000494586 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
CCSER2-208ENST00000494586 ADGRB3O60242 1522 aa13.11□□□□□ -0.31
CCSER2-208ENST00000494586 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
CCSER2-208ENST00000494586 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
CCSER2-208ENST00000494586 TMEM131LA2VDJ0 1609 aa13.1□□□□□ -0.31
CCSER2-208ENST00000494586 CFAP65Q6ZU64 1925 aaKnown RBP13.1□□□□□ -0.31
CCSER2-208ENST00000494586 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
CCSER2-208ENST00000494586 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCSER2-208ENST00000494586 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
CCSER2-208ENST00000494586 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
CCSER2-208ENST00000494586 DCAF11Q8TEB1 546 aa13.09□□□□□ -0.31
CCSER2-208ENST00000494586 KIF1BO60333 1816 aa13.09□□□□□ -0.31
CCSER2-208ENST00000494586 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
CCSER2-208ENST00000494586 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
CCSER2-208ENST00000494586 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
CCSER2-208ENST00000494586 MYOM2P54296 1465 aa13.06□□□□□ -0.32
CCSER2-208ENST00000494586 ARHGAP23Q9P227 1491 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms