RNA–Protein interactions for RNA: ENST00000494501.5

DYSF-219, Transcript of dysferlin, humanhuman

TSL 4

Gene DYSF, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-219ENST00000494501 PTPRKQ15262 1439 aa22.23■■□□□ 1.15
DYSF-219ENST00000494501 CEP170BQ9Y4F5 1589 aaPredicted RBP22.22■■□□□ 1.15
DYSF-219ENST00000494501 SHANK2Q9UPX8 1470 aa22.21■■□□□ 1.15
DYSF-219ENST00000494501 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.15
DYSF-219ENST00000494501 CAMSAP1Q5T5Y3 1602 aa22.2■■□□□ 1.14
DYSF-219ENST00000494501 KIF3BO15066 747 aa22.19■■□□□ 1.14
DYSF-219ENST00000494501 NCOA1Q15788 1441 aa22.18■■□□□ 1.14
DYSF-219ENST00000494501 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
DYSF-219ENST00000494501 DUOX2Q9NRD8 1548 aa22.16■■□□□ 1.14
DYSF-219ENST00000494501 PZPP20742 1482 aa22.16■■□□□ 1.14
DYSF-219ENST00000494501 TCOF1Q13428 1488 aaKnown RBP22.16■■□□□ 1.14
DYSF-219ENST00000494501 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
DYSF-219ENST00000494501 FBXO41Q8TF61 875 aa22.16■■□□□ 1.14
DYSF-219ENST00000494501 PTPRTO14522 1441 aa22.15■■□□□ 1.14
DYSF-219ENST00000494501 MROH1Q8NDA8 1641 aa22.15■■□□□ 1.14
DYSF-219ENST00000494501 CEP152O94986 1710 aa22.14■■□□□ 1.13
DYSF-219ENST00000494501 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
DYSF-219ENST00000494501 ABCC5O15440 1437 aa22.12■■□□□ 1.13
DYSF-219ENST00000494501 DAPK1P53355 1430 aa22.12■■□□□ 1.13
DYSF-219ENST00000494501 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
DYSF-219ENST00000494501 ABCC3O15438 1527 aa22.11■■□□□ 1.13
DYSF-219ENST00000494501 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
DYSF-219ENST00000494501 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
DYSF-219ENST00000494501 PRDM15P57071 1507 aaPredicted RBP22.09■■□□□ 1.13
DYSF-219ENST00000494501 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
DYSF-219ENST00000494501 ERBINQ96RT1 1412 aa22.08■■□□□ 1.13
DYSF-219ENST00000494501 TNRQ92752 1358 aa22.07■■□□□ 1.12
DYSF-219ENST00000494501 KIF15Q9NS87 1388 aa22.07■■□□□ 1.12
DYSF-219ENST00000494501 CERKQ8TCT0 537 aa22.05■■□□□ 1.12
DYSF-219ENST00000494501 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
DYSF-219ENST00000494501 NLRP1Q9C000 1473 aa22.03■■□□□ 1.12
DYSF-219ENST00000494501 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.11
DYSF-219ENST00000494501 CFAP65Q6ZU64 1925 aaKnown RBP22■■□□□ 1.11
DYSF-219ENST00000494501 PKD2Q13563 968 aa22■■□□□ 1.11
DYSF-219ENST00000494501 FBXO31Q5XUX0 539 aaPredicted RBP22■■□□□ 1.11
DYSF-219ENST00000494501 ADGRL2O95490 1459 aa21.99■■□□□ 1.11
DYSF-219ENST00000494501 ERVK-7P63135 1459 aa21.99■■□□□ 1.11
DYSF-219ENST00000494501 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
DYSF-219ENST00000494501 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
DYSF-219ENST00000494501 NEURL4Q96JN8 1562 aa21.98■■□□□ 1.11
DYSF-219ENST00000494501 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
DYSF-219ENST00000494501 RRP7BPQ9NSQ0 103 aa21.96■■□□□ 1.11
DYSF-219ENST00000494501 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
DYSF-219ENST00000494501 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
DYSF-219ENST00000494501 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
DYSF-219ENST00000494501 ARHGAP31Q2M1Z3 1444 aa21.93■■□□□ 1.1
DYSF-219ENST00000494501 LMTK2Q8IWU2 1503 aa21.91■■□□□ 1.1
DYSF-219ENST00000494501 KANK1Q14678 1352 aa21.9■■□□□ 1.1
DYSF-219ENST00000494501 FAM50AQ14320 339 aaKnown RBP21.9■■□□□ 1.1
DYSF-219ENST00000494501 CHIC2Q9UKJ5 165 aa21.9■■□□□ 1.1
DYSF-219ENST00000494501 IQGAP1P46940 1657 aa21.89■■□□□ 1.1
DYSF-219ENST00000494501 EFCAB6Q5THR3 1501 aa21.88■■□□□ 1.09
DYSF-219ENST00000494501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
DYSF-219ENST00000494501 THEMISQ8N1K5 641 aaPredicted RBP21.87■■□□□ 1.09
DYSF-219ENST00000494501 KDM5AP29375 1690 aaKnown RBP21.87■■□□□ 1.09
DYSF-219ENST00000494501 ZNF335Q9H4Z2 1342 aaPredicted RBP21.85■■□□□ 1.09
DYSF-219ENST00000494501 MED14O60244 1454 aa21.85■■□□□ 1.09
DYSF-219ENST00000494501 PIK3C2BO00750 1634 aa21.85■■□□□ 1.09
DYSF-219ENST00000494501 UNC13BO14795 1591 aa21.84■■□□□ 1.09
DYSF-219ENST00000494501 GCC2Q8IWJ2 1684 aa21.84■■□□□ 1.09
DYSF-219ENST00000494501 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.09
DYSF-219ENST00000494501 TET3O43151 1660 aa21.83■■□□□ 1.09
DYSF-219ENST00000494501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.09
DYSF-219ENST00000494501 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
DYSF-219ENST00000494501 NPHP4O75161 1426 aaPredicted RBP21.81■■□□□ 1.08
DYSF-219ENST00000494501 SYNMO15061 1565 aa21.81■■□□□ 1.08
DYSF-219ENST00000494501 CPS1P31327 1500 aa21.8■■□□□ 1.08
DYSF-219ENST00000494501 SLIT1O75093 1534 aa21.8■■□□□ 1.08
DYSF-219ENST00000494501 ROCK1Q13464 1354 aa21.78■■□□□ 1.08
DYSF-219ENST00000494501 RPRD2Q5VT52 1461 aaKnown RBP21.77■■□□□ 1.08
DYSF-219ENST00000494501 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.08
DYSF-219ENST00000494501 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
DYSF-219ENST00000494501 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
DYSF-219ENST00000494501 NOS1P29475 1434 aa21.74■■□□□ 1.07
DYSF-219ENST00000494501 ADGRB3O60242 1522 aa21.74■■□□□ 1.07
DYSF-219ENST00000494501 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
DYSF-219ENST00000494501 E9PCH4 1651 aa21.72■■□□□ 1.07
DYSF-219ENST00000494501 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
DYSF-219ENST00000494501 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
DYSF-219ENST00000494501 TMEM2Q9UHN6 1383 aa21.67■■□□□ 1.06
DYSF-219ENST00000494501 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
DYSF-219ENST00000494501 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
DYSF-219ENST00000494501 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
DYSF-219ENST00000494501 ITGAEP38570 1179 aa21.63■■□□□ 1.05
DYSF-219ENST00000494501 IDI1Q13907 227 aa21.63■■□□□ 1.05
DYSF-219ENST00000494501 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
DYSF-219ENST00000494501 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
DYSF-219ENST00000494501 LTKP29376 864 aa21.62■■□□□ 1.05
DYSF-219ENST00000494501 TXNDC2Q86VQ3 553 aa21.62■■□□□ 1.05
DYSF-219ENST00000494501 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
DYSF-219ENST00000494501 XIRP1Q702N8 1843 aaKnown RBP21.6■■□□□ 1.05
DYSF-219ENST00000494501 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
DYSF-219ENST00000494501 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
DYSF-219ENST00000494501 ALKQ9UM73 1620 aa21.56■■□□□ 1.04
DYSF-219ENST00000494501 NUP155O75694 1391 aa21.56■■□□□ 1.04
DYSF-219ENST00000494501 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
DYSF-219ENST00000494501 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
DYSF-219ENST00000494501 TOM1O60784 492 aa21.53■■□□□ 1.04
DYSF-219ENST00000494501 NAIPQ13075 1403 aa21.5■■□□□ 1.03
DYSF-219ENST00000494501 RIMS2Q9UQ26 1411 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms