RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 DAPK1P53355 1430 aa20.54■□□□□ 0.88
ERCC3-209ENST00000494464 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
ERCC3-209ENST00000494464 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
ERCC3-209ENST00000494464 DUOX2Q9NRD8 1548 aa20.54■□□□□ 0.88
ERCC3-209ENST00000494464 ZC3H13Q5T200 1668 aaKnown RBP20.53■□□□□ 0.88
ERCC3-209ENST00000494464 KIF3BO15066 747 aa20.53■□□□□ 0.88
ERCC3-209ENST00000494464 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
ERCC3-209ENST00000494464 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
ERCC3-209ENST00000494464 STRCQ7RTU9 1775 aa20.5■□□□□ 0.87
ERCC3-209ENST00000494464 PZPP20742 1482 aa20.49■□□□□ 0.87
ERCC3-209ENST00000494464 ERBINQ96RT1 1412 aa20.48■□□□□ 0.87
ERCC3-209ENST00000494464 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
ERCC3-209ENST00000494464 CEP170BQ9Y4F5 1589 aaPredicted RBP20.47■□□□□ 0.87
ERCC3-209ENST00000494464 ABCC3O15438 1527 aa20.46■□□□□ 0.87
ERCC3-209ENST00000494464 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
ERCC3-209ENST00000494464 DEPDC5O75140 1603 aa20.44■□□□□ 0.86
ERCC3-209ENST00000494464 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
ERCC3-209ENST00000494464 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
ERCC3-209ENST00000494464 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
ERCC3-209ENST00000494464 CEP152O94986 1710 aa20.42■□□□□ 0.86
ERCC3-209ENST00000494464 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
ERCC3-209ENST00000494464 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
ERCC3-209ENST00000494464 A2ML1A8K2U0 1454 aa20.4■□□□□ 0.86
ERCC3-209ENST00000494464 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
ERCC3-209ENST00000494464 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
ERCC3-209ENST00000494464 TNRQ92752 1358 aa20.38■□□□□ 0.85
ERCC3-209ENST00000494464 PTPRTO14522 1441 aa20.38■□□□□ 0.85
ERCC3-209ENST00000494464 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
ERCC3-209ENST00000494464 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
ERCC3-209ENST00000494464 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
ERCC3-209ENST00000494464 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
ERCC3-209ENST00000494464 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
ERCC3-209ENST00000494464 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
ERCC3-209ENST00000494464 ARHGAP31Q2M1Z3 1444 aa20.33■□□□□ 0.84
ERCC3-209ENST00000494464 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.84
ERCC3-209ENST00000494464 CHIC2Q9UKJ5 165 aa20.33■□□□□ 0.84
ERCC3-209ENST00000494464 LMTK2Q8IWU2 1503 aa20.32■□□□□ 0.84
ERCC3-209ENST00000494464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
ERCC3-209ENST00000494464 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
ERCC3-209ENST00000494464 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
ERCC3-209ENST00000494464 KANK1Q14678 1352 aa20.28■□□□□ 0.84
ERCC3-209ENST00000494464 ANKRD50Q9ULJ7 1429 aa20.28■□□□□ 0.84
ERCC3-209ENST00000494464 UGGT1Q9NYU2 1555 aa20.28■□□□□ 0.84
ERCC3-209ENST00000494464 ROCK1Q13464 1354 aa20.27■□□□□ 0.84
ERCC3-209ENST00000494464 PKD2Q13563 968 aa20.27■□□□□ 0.84
ERCC3-209ENST00000494464 UNC13BO14795 1591 aa20.26■□□□□ 0.83
ERCC3-209ENST00000494464 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
ERCC3-209ENST00000494464 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
ERCC3-209ENST00000494464 FBXO41Q8TF61 875 aa20.24■□□□□ 0.83
ERCC3-209ENST00000494464 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
ERCC3-209ENST00000494464 LTBP4Q8N2S1 1624 aa20.23■□□□□ 0.83
ERCC3-209ENST00000494464 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
ERCC3-209ENST00000494464 CFAP65Q6ZU64 1925 aaKnown RBP20.22■□□□□ 0.83
ERCC3-209ENST00000494464 NCKAP5LQ9HCH0 1330 aa20.22■□□□□ 0.83
ERCC3-209ENST00000494464 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
ERCC3-209ENST00000494464 CERKQ8TCT0 537 aa20.21■□□□□ 0.83
ERCC3-209ENST00000494464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.831e-11■■■■□ 21.4
ERCC3-209ENST00000494464 TET3O43151 1660 aa20.2■□□□□ 0.82
ERCC3-209ENST00000494464 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
ERCC3-209ENST00000494464 GCC2Q8IWJ2 1684 aa20.19■□□□□ 0.82
ERCC3-209ENST00000494464 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
ERCC3-209ENST00000494464 RPRD2Q5VT52 1461 aaKnown RBP20.18■□□□□ 0.82
ERCC3-209ENST00000494464 SYNMO15061 1565 aa20.17■□□□□ 0.82
ERCC3-209ENST00000494464 PIK3C2BO00750 1634 aa20.17■□□□□ 0.82
ERCC3-209ENST00000494464 IQGAP3Q86VI3 1631 aa20.17■□□□□ 0.82
ERCC3-209ENST00000494464 MED14O60244 1454 aa20.17■□□□□ 0.82
ERCC3-209ENST00000494464 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
ERCC3-209ENST00000494464 NOS1P29475 1434 aa20.16■□□□□ 0.82
ERCC3-209ENST00000494464 IQGAP1P46940 1657 aa20.14■□□□□ 0.82
ERCC3-209ENST00000494464 SLIT1O75093 1534 aa20.14■□□□□ 0.81
ERCC3-209ENST00000494464 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
ERCC3-209ENST00000494464 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
ERCC3-209ENST00000494464 ITGAEP38570 1179 aa20.1■□□□□ 0.81
ERCC3-209ENST00000494464 NPHP4O75161 1426 aaPredicted RBP20.1■□□□□ 0.81
ERCC3-209ENST00000494464 E9PCH4 1651 aa20.1■□□□□ 0.81
ERCC3-209ENST00000494464 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
ERCC3-209ENST00000494464 ZNF335Q9H4Z2 1342 aaPredicted RBP20.09■□□□□ 0.81
ERCC3-209ENST00000494464 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
ERCC3-209ENST00000494464 CPS1P31327 1500 aa20.06■□□□□ 0.8
ERCC3-209ENST00000494464 NAIPQ13075 1403 aa20.04■□□□□ 0.8
ERCC3-209ENST00000494464 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
ERCC3-209ENST00000494464 IDI1Q13907 227 aa20.03■□□□□ 0.8
ERCC3-209ENST00000494464 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
ERCC3-209ENST00000494464 NUP155O75694 1391 aa20.03■□□□□ 0.8
ERCC3-209ENST00000494464 HFM1A2PYH4 1435 aa20■□□□□ 0.79
ERCC3-209ENST00000494464 TMEM131LA2VDJ0 1609 aa20■□□□□ 0.79
ERCC3-209ENST00000494464 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
ERCC3-209ENST00000494464 LTKP29376 864 aa19.98■□□□□ 0.79
ERCC3-209ENST00000494464 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
ERCC3-209ENST00000494464 SPHKAPQ2M3C7 1700 aa19.98■□□□□ 0.79
ERCC3-209ENST00000494464 STRCP1A6NGW2 1772 aa19.98■□□□□ 0.79
ERCC3-209ENST00000494464 TXNDC2Q86VQ3 553 aa19.97■□□□□ 0.79
ERCC3-209ENST00000494464 EID1Q9Y6B2 187 aa19.97■□□□□ 0.79
ERCC3-209ENST00000494464 ZFYVE9O95405 1425 aa19.95■□□□□ 0.78
ERCC3-209ENST00000494464 TRPM2O94759 1503 aa19.89■□□□□ 0.78
ERCC3-209ENST00000494464 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
ERCC3-209ENST00000494464 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
ERCC3-209ENST00000494464 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
ERCC3-209ENST00000494464 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
ERCC3-209ENST00000494464 CLTCL1P53675 1640 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms