RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CROCC2H7BZ55 1655 aa33.72■■■□□ 2.99
HPS3-207ENST00000494327 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
HPS3-207ENST00000494327 DUOX2Q9NRD8 1548 aa33.69■■■□□ 2.98
HPS3-207ENST00000494327 ANKRD30AQ9BXX3 1397 aa33.67■■■□□ 2.98
HPS3-207ENST00000494327 NPATQ14207 1427 aa33.64■■■□□ 2.98
HPS3-207ENST00000494327 SETD1BQ9UPS6 1966 aaKnown RBP33.64■■■□□ 2.98
HPS3-207ENST00000494327 KDM5DQ9BY66 1539 aa33.63■■■□□ 2.97
HPS3-207ENST00000494327 PTPRKQ15262 1439 aa33.62■■■□□ 2.97
HPS3-207ENST00000494327 EIF2AK4Q9P2K8 1649 aaKnown RBP33.6■■■□□ 2.97
HPS3-207ENST00000494327 NCOA1Q15788 1441 aa33.59■■■□□ 2.97
HPS3-207ENST00000494327 FBXO31Q5XUX0 539 aaPredicted RBP33.58■■■□□ 2.97
HPS3-207ENST00000494327 ERBINQ96RT1 1412 aa33.58■■■□□ 2.97
HPS3-207ENST00000494327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.57■■■□□ 2.96
HPS3-207ENST00000494327 RNF17Q9BXT8 1623 aaKnown RBP33.57■■■□□ 2.96
HPS3-207ENST00000494327 ITGAEP38570 1179 aa33.56■■■□□ 2.96
HPS3-207ENST00000494327 FAM135AQ9P2D6 1515 aa33.56■■■□□ 2.96
HPS3-207ENST00000494327 ADGRL2O95490 1459 aa33.52■■■□□ 2.96
HPS3-207ENST00000494327 PZPP20742 1482 aa33.5■■■□□ 2.95
HPS3-207ENST00000494327 MROH1Q8NDA8 1641 aa33.5■■■□□ 2.95
HPS3-207ENST00000494327 ABCC3O15438 1527 aa33.49■■■□□ 2.95
HPS3-207ENST00000494327 TNRQ92752 1358 aa33.47■■■□□ 2.95
HPS3-207ENST00000494327 MYO3AQ8NEV4 1616 aa33.44■■■□□ 2.94
HPS3-207ENST00000494327 KANK1Q14678 1352 aa33.44■■■□□ 2.94
HPS3-207ENST00000494327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.43■■■□□ 2.94
HPS3-207ENST00000494327 ZC3H13Q5T200 1668 aaKnown RBP33.42■■■□□ 2.94
HPS3-207ENST00000494327 ANKRD50Q9ULJ7 1429 aa33.42■■■□□ 2.94
HPS3-207ENST00000494327 CEP152O94986 1710 aa33.4■■■□□ 2.94
HPS3-207ENST00000494327 PRDM15P57071 1507 aaPredicted RBP33.4■■■□□ 2.94
HPS3-207ENST00000494327 DMRT2Q9Y5R5 561 aa33.4■■■□□ 2.94
HPS3-207ENST00000494327 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
HPS3-207ENST00000494327 CAMSAP1Q5T5Y3 1602 aa33.37■■■□□ 2.93
HPS3-207ENST00000494327 STRCQ7RTU9 1775 aa33.37■■■□□ 2.93
HPS3-207ENST00000494327 ROCK1Q13464 1354 aa33.36■■■□□ 2.93
HPS3-207ENST00000494327 RRBP1Q9P2E9 1410 aaKnown RBP33.36■■■□□ 2.93
HPS3-207ENST00000494327 DEPDC5O75140 1603 aa33.35■■■□□ 2.93
HPS3-207ENST00000494327 A2ML1A8K2U0 1454 aa33.35■■■□□ 2.93
HPS3-207ENST00000494327 NCKAP5LQ9HCH0 1330 aa33.33■■■□□ 2.93
HPS3-207ENST00000494327 ZNF142P52746 1687 aaPredicted RBP33.33■■■□□ 2.93
HPS3-207ENST00000494327 ERVK-7P63135 1459 aa33.31■■■□□ 2.92
HPS3-207ENST00000494327 ARHGAP31Q2M1Z3 1444 aa33.28■■■□□ 2.92
HPS3-207ENST00000494327 SPATA31D1Q6ZQQ2 1576 aa33.27■■■□□ 2.92
HPS3-207ENST00000494327 NLRP1Q9C000 1473 aa33.27■■■□□ 2.92
HPS3-207ENST00000494327 PTPRTO14522 1441 aa33.25■■■□□ 2.91
HPS3-207ENST00000494327 VWDEQ8N2E2 1590 aa33.25■■■□□ 2.91
HPS3-207ENST00000494327 PKD2Q13563 968 aa33.24■■■□□ 2.91
HPS3-207ENST00000494327 PLA2R1Q13018 1463 aa33.24■■■□□ 2.91
HPS3-207ENST00000494327 CFAP65Q6ZU64 1925 aaKnown RBP33.24■■■□□ 2.91
HPS3-207ENST00000494327 THEMISQ8N1K5 641 aaPredicted RBP33.23■■■□□ 2.91
HPS3-207ENST00000494327 LMTK2Q8IWU2 1503 aa33.23■■■□□ 2.91
HPS3-207ENST00000494327 UGGT1Q9NYU2 1555 aa33.2■■■□□ 2.91
HPS3-207ENST00000494327 ILDR1Q86SU0 546 aaPredicted RBP33.17■■■□□ 2.9
HPS3-207ENST00000494327 ANKLE2Q86XL3 938 aa33.14■■■□□ 2.9
HPS3-207ENST00000494327 EFCAB6Q5THR3 1501 aa33.13■■■□□ 2.89
HPS3-207ENST00000494327 UNC13BO14795 1591 aa33.12■■■□□ 2.89
HPS3-207ENST00000494327 NUP155O75694 1391 aa33.11■■■□□ 2.89
HPS3-207ENST00000494327 CERKQ8TCT0 537 aa33.11■■■□□ 2.89
HPS3-207ENST00000494327 STAG3Q9UJ98 1225 aa33.1■■■□□ 2.89
HPS3-207ENST00000494327 IDI1Q13907 227 aa33.07■■■□□ 2.88
HPS3-207ENST00000494327 TET3O43151 1660 aa33.04■■■□□ 2.88
HPS3-207ENST00000494327 NOS1P29475 1434 aa33.04■■■□□ 2.88
HPS3-207ENST00000494327 NAIPQ13075 1403 aa33.04■■■□□ 2.88
HPS3-207ENST00000494327 FBXO41Q8TF61 875 aa33.03■■■□□ 2.88
HPS3-207ENST00000494327 RPRD2Q5VT52 1461 aaKnown RBP33.03■■■□□ 2.88
HPS3-207ENST00000494327 ZNF335Q9H4Z2 1342 aaPredicted RBP33.01■■■□□ 2.87
HPS3-207ENST00000494327 SYNMO15061 1565 aa33■■■□□ 2.87
HPS3-207ENST00000494327 UBR1Q8IWV7 1749 aa33■■■□□ 2.87
HPS3-207ENST00000494327 SLC52A1Q9NWF4 448 aa33■■■□□ 2.87
HPS3-207ENST00000494327 IQGAP3Q86VI3 1631 aa32.99■■■□□ 2.87
HPS3-207ENST00000494327 POLR1AO95602 1720 aaPredicted RBP32.99■■■□□ 2.87
HPS3-207ENST00000494327 PIK3C2BO00750 1634 aa32.99■■■□□ 2.87
HPS3-207ENST00000494327 NEURL4Q96JN8 1562 aa32.98■■■□□ 2.87
HPS3-207ENST00000494327 GCC2Q8IWJ2 1684 aa32.97■■■□□ 2.87
HPS3-207ENST00000494327 HFM1A2PYH4 1435 aa32.96■■■□□ 2.87
HPS3-207ENST00000494327 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
HPS3-207ENST00000494327 TXNDC2Q86VQ3 553 aa32.96■■■□□ 2.87
HPS3-207ENST00000494327 TRIM52Q96A61 297 aa32.95■■■□□ 2.87
HPS3-207ENST00000494327 LTKP29376 864 aa32.93■■■□□ 2.86
HPS3-207ENST00000494327 EID1Q9Y6B2 187 aa32.93■■■□□ 2.86
HPS3-207ENST00000494327 LTBP4Q8N2S1 1624 aa32.92■■■□□ 2.86
HPS3-207ENST00000494327 E9PCH4 1651 aa32.92■■■□□ 2.86
HPS3-207ENST00000494327 MED14O60244 1454 aa32.91■■■□□ 2.86
HPS3-207ENST00000494327 TMEM2Q9UHN6 1383 aa32.9■■■□□ 2.86
HPS3-207ENST00000494327 SLIT1O75093 1534 aa32.89■■■□□ 2.86
HPS3-207ENST00000494327 ARHGAP23Q9P227 1491 aa32.89■■■□□ 2.86
HPS3-207ENST00000494327 CHGAP10645 457 aaKnown RBP32.89■■■□□ 2.86
HPS3-207ENST00000494327 SCAF11Q99590 1463 aaKnown RBP32.88■■■□□ 2.85
HPS3-207ENST00000494327 ADGRB3O60242 1522 aa32.85■■■□□ 2.85
HPS3-207ENST00000494327 IQGAP1P46940 1657 aa32.83■■■□□ 2.85
HPS3-207ENST00000494327 KDM5AP29375 1690 aaKnown RBP32.82■■■□□ 2.84
HPS3-207ENST00000494327 SLC4A1APQ9BWU0 796 aaKnown RBP32.77■■■□□ 2.84
HPS3-207ENST00000494327 BCANQ96GW7 911 aa32.76■■■□□ 2.83
HPS3-207ENST00000494327 SENP3Q9H4L4 574 aaPredicted RBP32.76■■■□□ 2.83
HPS3-207ENST00000494327 HDGFP51858 240 aaKnown RBP32.73■■■□□ 2.83
HPS3-207ENST00000494327 TMEM131LA2VDJ0 1609 aa32.73■■■□□ 2.83
HPS3-207ENST00000494327 PPP1R15AO75807 674 aaPredicted RBP32.72■■■□□ 2.83
HPS3-207ENST00000494327 RIMS2Q9UQ26 1411 aa32.71■■■□□ 2.83
HPS3-207ENST00000494327 IQSEC2Q5JU85 1478 aa32.7■■■□□ 2.83
HPS3-207ENST00000494327 NUTM2DQ5VT03 806 aaPredicted RBP32.7■■■□□ 2.83
HPS3-207ENST00000494327 SLC26A8Q96RN1 970 aa32.7■■■□□ 2.83
HPS3-207ENST00000494327 MYO5BQ9ULV0 1848 aa32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms